New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 401975 =225 (0.950)2 (0.010) 2/194 29.3 0.01 coding (104/201 nt) RCAP_rcc00374 hypothetical protein
?NC_014034 401993 = 231 (0.940)coding (86/201 nt) RCAP_rcc00374 hypothetical protein
Rejected: Position hash score below cutoff.

TGACCGCGCATACCTCCTCTCTCACTGCGCTCGCGTCCGAAGCCGTTCTGACCCCCGATGCGCTGATTGCCGGGCCCTGTGCCCTGCCGGTGGCGCCGATGGC....................................................................................................  <  NC_014034/402077‑401975
....................................................................................................GGCAGGGCACAGGGCCCGGCAATCAGCGCATCGGGGGTCAGAACGGCTTCGGACGCGAGCGCAGTGAGAGAGGAGGTATGCGCGGTCATGCGTGGATCCATTG  >  NC_014034/401993‑402092
                                                                                                                                                                                                           
                            GCTCGCGTCCGAAGCCGTTCTGACCCCCGATGCGCTGATTGCCGGGCCCTGTGCCCTGCCGGTGGCGCCGATGGCAGGGCACAGGGCCCGGCAATCAGCGC                                                                            >  1:4101686/1‑101 (MQ=255)
                              cCGCGTCCGAAGCCGTTCTGACCCCCGATGCGCTGATTGCCGGGCCCTGTGCCCTGCCGGTGGCGCCGATGGCAGGGCACAGGGCCCGGCAATCAGCGCAT                                                                          <  2:4101369/100‑1 (MQ=255)
                                                                                                                                                                                                           
TGACCGCGCATACCTCCTCTCTCACTGCGCTCGCGTCCGAAGCCGTTCTGACCCCCGATGCGCTGATTGCCGGGCCCTGTGCCCTGCCGGTGGCGCCGATGGC....................................................................................................  <  NC_014034/402077‑401975
....................................................................................................GGCAGGGCACAGGGCCCGGCAATCAGCGCATCGGGGGTCAGAACGGCTTCGGACGCGAGCGCAGTGAGAGAGGAGGTATGCGCGGTCATGCGTGGATCCATTG  >  NC_014034/401993‑402092

Base quality scores:  ATCG  < 3 ≤  ATCG  < 22 ≤  ATCG  < 27 ≤  ATCG  < 33 ≤  ATCG  < 40 ≤  ATCG