New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 484842 =252 (1.080)2 (0.010) 2/190 29.0 0.01 coding (891/900 nt) RCAP_rcc00450 hypothetical protein
?NC_014034 = 3171174 294 (1.200)coding (227/1092 nt) hisC1 histidinol‑phosphate aminotransferase
Rejected: Position hash score below cutoff.

CGCGCTTCCAGCGCCAGCGCCAGCGCCGTGCCCCCGGTCTTCGGGATATGGACAAAGATGAAGCGGCGGCCCGGGGAAACGATCATGCAGAGAGATTAGCGCCCG....................................................................................................  <  NC_014034/484946‑484842
....................................................................................................GCCCGTGCACGTCGCCAATCGCCTGACGCAGCGCGGCATGGTCGGTGGAAGGGTAGCGGTGCAGCTTGTGCACCGTGCGCGAGAACGCCTCCTTGGCCCGGTCCG  <  NC_014034/3171174‑3171075
                                                                                                                                                                                                             
                                                                GGCGGCCCGGGGAAACGATCATGCAGAGAGATTAGCGCCCGTGCACGTCGCCAATCGCCTGACGCAGCGCGGCATGGTCGGTGGAAGGGTAGCGGTGCAGC                                          >  2:4674616/1‑101 (MQ=255)
                                                                    GCCCGGGGAAACGATCATGCAGAGAGATTAGCGCCCGTGCACGTCGCCAATCGCCTGACGCAGCGCGGCATGGTCGGTGGAAGGGTAGCGGTGCAGCTTGT                                      <  1:4674939/101‑1 (MQ=255)
                                                                                                                                                                                                             
CGCGCTTCCAGCGCCAGCGCCAGCGCCGTGCCCCCGGTCTTCGGGATATGGACAAAGATGAAGCGGCGGCCCGGGGAAACGATCATGCAGAGAGATTAGCGCCCG....................................................................................................  <  NC_014034/484946‑484842
....................................................................................................GCCCGTGCACGTCGCCAATCGCCTGACGCAGCGCGGCATGGTCGGTGGAAGGGTAGCGGTGCAGCTTGTGCACCGTGCGCGAGAACGCCTCCTTGGCCCGGTCCG  <  NC_014034/3171174‑3171075

Base quality scores:  ATCG  < 3 ≤  ATCG  < 20 ≤  ATCG  < 24 ≤  ATCG  < 31 ≤  ATCG  < 38 ≤  ATCG