New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	489364 =	194 (0.860)	2 (0.010)	2/184	28.6	0.01	coding (584/1197 nt)	coaBC	bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate‑‑cysteine ligase
	?	NC_014034	2764022 =	237 (0.970)					coding (797/1425 nt)	RCAP_rcc02577	phage integrase
Rejected: Position hash score below cutoff.

GATGGGCCGGATGGCGGAGCCCGCGGAAATTCTGGCGGCGATTCACGCCGCGCTGGCAGAGGGGCCGCTGAAGGGGCGGCATGTGCTGGTGACCTCGGGGCCGACGCA....................................................................................................  <  NC_014034/489471‑489364 ....................................................................................................CCGACGCACGGCCCCGCACGGTGCCCAGAGTGAGCTTGTTAAACGGGTTCTGAAAGGTCGCCGGAAGGGGCAACTCAGTGGCCGCGAAGTTGATCACGGCTTTCAGCC  >  NC_014034/2764022‑2764121                                                                                                                                                                                                                                                                           AGAGGGGCCGCTGAAGGGGCGGCATGTGCTGGTGACCTCGGGGCCGACGCACGGCCCCGCACGGTGCCCAGAGTGAGCTTGTTAAACGGGTTCTGAAAGGT                                                    >  1:3959453/1‑101 (MQ=255)                                                                               GCATGTGCTGGTGACCTCGGGGCCGACGCACGGCCCCGCACGGTGCCCAGAGTGAGCTTGTTAAACGGGTTCTGAAAGGTCGCCGGAAGGGGCAACTCAGT                               <  2:3959161/101‑1 (MQ=255)                                                                                                                                                                                                                  GATGGGCCGGATGGCGGAGCCCGCGGAAATTCTGGCGGCGATTCACGCCGCGCTGGCAGAGGGGCCGCTGAAGGGGCGGCATGTGCTGGTGACCTCGGGGCCGACGCA....................................................................................................  <  NC_014034/489471‑489364 ....................................................................................................CCGACGCACGGCCCCGCACGGTGCCCAGAGTGAGCTTGTTAAACGGGTTCTGAAAGGTCGCCGGAAGGGGCAACTCAGTGGCCGCGAAGTTGATCACGGCTTTCAGCC  >  NC_014034/2764022‑2764121 Base quality scores:  ATCG  < 3 ≤  ATCG  < 29 ≤  ATCG  < 33 ≤  ATCG  < 35 ≤  ATCG  < 41 ≤  ATCG