New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	= 642543	221 (1.000)	2 (0.010)	2/180	28.3	0.01	coding (345/2268 nt)	nrdJ1	ribonucleoside‑diphosphate reductase NrdJ
	?	NC_014034	= 3265560	261 (1.070)					coding (24/348 nt)	RCAP_rcc03071	hypothetical protein
Rejected: Position hash score below cutoff.

GGGCGGTGACCCTGTTCAACTGCTTCGTCATGGGCACGATCCCCGATTCGATGGCCGGCATTTTCGACATGCTGAAGGAAGCGGCGCTGACGATGCAGCAGGGCGGCGGC...................................................................................................  >  NC_014034/642434‑642543 ....................................................................................................GGGCGGCGGCGAGTCGGCGTTGGTAGTCTTCCATGGTGCAACCTTTGATGGTTTTGCGGTTCATGTTTGCCCTGCGGAACCGGCGCGTCAACCCTCTCGACAGGCGTTC  <  NC_014034/3265560‑3265462                                                                                                                                                                                                                                                                                             AAGGAAGCGGCGCTGACGATGCAGCAGGGCGGCGGCGAGTCGGCGTTGGTAGTCTTCCATGGTGCAACCTTTGATGGTTTTGCGGTTCATGTTTGCCCTGC                                    >  1:4008213/1‑101 (MQ=255)                                                                               AAGCGGCGCTGACGATGCAGCAGGGCGGCGGCGAGTCGGCGTTGGTAGTCTTCCATGGTGCAACCTTTGATGGTTTTGCGGTTCATGTTTGCCCTGCGGAA                                <  2:4007911/101‑1 (MQ=255)                                                                                                                                                                                                                   GGGCGGTGACCCTGTTCAACTGCTTCGTCATGGGCACGATCCCCGATTCGATGGCCGGCATTTTCGACATGCTGAAGGAAGCGGCGCTGACGATGCAGCAGGGCGGCGGC...................................................................................................  >  NC_014034/642434‑642543 ....................................................................................................GGGCGGCGGCGAGTCGGCGTTGGTAGTCTTCCATGGTGCAACCTTTGATGGTTTTGCGGTTCATGTTTGCCCTGCGGAACCGGCGCGTCAACCCTCTCGACAGGCGTTC  <  NC_014034/3265560‑3265462 Base quality scores:  ATCG  < 3 ≤  ATCG  < 25 ≤  ATCG  < 31 ≤  ATCG  < 34 ≤  ATCG  < 40 ≤  ATCG