New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 681965 =143 (0.640)2 (0.010) 2/182 28.4 0.01 coding (1642/6438 nt) RCAP_rcc00630 ice nucleation protein repeat family protein
?NC_014034 2651309 = 215 (0.880)coding (1034/1047 nt) selU tRNA 2‑selenouridine synthase
Rejected: Position hash score below cutoff.

AGCGGCAGCGGGGCGGCGGGGCTGAGTTCGGCGCAGCTGGCGGGCCTTGAGAGCGGGCAGATCGCGGCGCTGGCCACGGCGGCGATTGCCGGTCTGTCGACGGCGGGGC...................................................................................................  <  NC_014034/682073‑681965
....................................................................................................CGGCGGGGCGGTTGGCGGGCTGAACCACTTTTTCCCGATTTCACCCTTGACGCCCCCCGCGCCATCCCTTAGTGACGCCGCCAGTGGCTAGGTAGCTCAGCAGGTTAG  >  NC_014034/2651309‑2651407
                                                                                                                                                                                                                
                                                                        GCCACGGCGGCGATTGCCGGTCTGTCGACGGCGGGGCGGTTGGCGGGCTGAACCACTTTTTCCCGATTTCACCCTTGACGCCCCCCGCGCCATCCCTTAGT                                     >  1:2220061/1‑101 (MQ=255)
                                                                         CCACGGCGGCGATTGCCGGTCTGTCGACGGCGGGGCGGTTGGCGGGCTGAACCACTTTTTCCCGATTTCACCCTTGACGCCCCCCGCGCCATCCCTTAGTG                                    <  2:2219906/101‑1 (MQ=255)
                                                                                                                                                                                                                
AGCGGCAGCGGGGCGGCGGGGCTGAGTTCGGCGCAGCTGGCGGGCCTTGAGAGCGGGCAGATCGCGGCGCTGGCCACGGCGGCGATTGCCGGTCTGTCGACGGCGGGGC...................................................................................................  <  NC_014034/682073‑681965
....................................................................................................CGGCGGGGCGGTTGGCGGGCTGAACCACTTTTTCCCGATTTCACCCTTGACGCCCCCCGCGCCATCCCTTAGTGACGCCGCCAGTGGCTAGGTAGCTCAGCAGGTTAG  >  NC_014034/2651309‑2651407

Base quality scores:  ATCG  < 3 ≤  ATCG  < 23 ≤  ATCG  < 29 ≤  ATCG  < 33 ≤  ATCG  < 39 ≤  ATCG