New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 704457 =187 (0.830)2 (0.010) 2/184 28.6 0.01 coding (765/2811 nt) RCAP_rcc00643 diguanylate cyclase/phosphodiesterase
?NC_014034 = 2465402 234 (0.960)coding (739/810 nt) RCAP_rcc02289 two‑component response regulator receiver protein
Rejected: Position hash score below cutoff.

AATCCCGAATTGTTGCGGCTTCTGATCGAAAGCACGATCGACCCGGTGGCGCTGACAGATACCGAGGGCCGGGTGGTGATCGCCAACAAGGCCTATGCCCAGCCCTTC....................................................................................................  <  NC_014034/704564‑704457
....................................................................................................AGCCCTTCTCGGAGGAACAGGTCCGCTCGGCGGTCAGCCAGGCGATGTTCTTTGCCTCCACCGAGACGCTCGTAGGCTGACCGGCCCCCGTCCTCGCGCCGAAAACCC  <  NC_014034/2465402‑2465303
                                                                                                                                                                                                                
                                                                         ctGTGATCGCCAACAAGGCCTATGCCCAGCCCTTCTCGGAGGAACAGGTCCGCTCGGCGGTCAGCCAGGCGATGTTCTTTGCCTCCACCGAGACGCTCGTA                                    <  1:3585374/99‑1 (MQ=255)
                                                                           GTGATCGCCAACAAGGCCTATGCCCAGCCCTTCTCGGAGGAACAGGTCCGCTCGGCGGTCAGCCAGGCGATGTTCTTTGCCTCCACCGAGACGCTCGTAag                                  >  2:3585103/1‑99 (MQ=255)
                                                                                                                                                                                                                
AATCCCGAATTGTTGCGGCTTCTGATCGAAAGCACGATCGACCCGGTGGCGCTGACAGATACCGAGGGCCGGGTGGTGATCGCCAACAAGGCCTATGCCCAGCCCTTC....................................................................................................  <  NC_014034/704564‑704457
....................................................................................................AGCCCTTCTCGGAGGAACAGGTCCGCTCGGCGGTCAGCCAGGCGATGTTCTTTGCCTCCACCGAGACGCTCGTAGGCTGACCGGCCCCCGTCCTCGCGCCGAAAACCC  <  NC_014034/2465402‑2465303

Base quality scores:  ATCG  < 3 ≤  ATCG  < 30 ≤  ATCG  < 33 ≤  ATCG  < 35 ≤  ATCG  < 41 ≤  ATCG