New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 = 763961262 (1.150)2 (0.010) 2/186 28.7 0.02 coding (717/849 nt) pufL photosynthetic reaction center subunit L
?NC_014034 3574942 = 0 (0.000)coding (1378/3009 nt) RCAP_rcc03378 CDA peptide synthetase III
Rejected: Position hash score below cutoff.

GCAAGACGATGCGGACGCCGGACCACGAGGACACCTACTTCCGTGACCTCATGGGCTATTCGGTCGGCACGCTCGGCATCCACCGCCTCGGCCTGCTGCTCGCGCTG....................................................................................................  >  NC_014034/763855‑763961
....................................................................................................CGCGCTGGTGGAGCGCTGGGGCAAGGGGCGGGTCTTCCTCAACGCCTACGGGCCGACGGAAGCCACGGTCGAGGCCCTGTTCGCCCGCTGCACGCCCGGCCAGCCCG  >  NC_014034/3574942‑3575041
                                                                                                                                                                                                               
                                        ctGTGACCTCATGGGCTATTCGGTCGGCACGCTCGGCATCCACCGCCTCGGCCTGCTGCTCGCGCTGGTGGAGCGCTGGGGCAAGGGGCGGGTCTTCCTCA                                                                    <  1:2991120/99‑1 (MQ=21)
                                          GTGACCTCATGGGCTATTCGGTCGGCACGCTCGGCATCCACCGCCTCGGCCTGCTGCTCGCGCTGGTGGAGCGCTGGGGCAAGGGGCGGGGCTTCCTCAAg                                                                  >  2:2990892/1‑100 (MQ=21)
                                                                                                                                                                                                               
GCAAGACGATGCGGACGCCGGACCACGAGGACACCTACTTCCGTGACCTCATGGGCTATTCGGTCGGCACGCTCGGCATCCACCGCCTCGGCCTGCTGCTCGCGCTG....................................................................................................  >  NC_014034/763855‑763961
....................................................................................................CGCGCTGGTGGAGCGCTGGGGCAAGGGGCGGGTCTTCCTCAACGCCTACGGGCCGACGGAAGCCACGGTCGAGGCCCTGTTCGCCCGCTGCACGCCCGGCCAGCCCG  >  NC_014034/3574942‑3575041

Base quality scores:  ATCG  < 3 ≤  ATCG  < 17 ≤  ATCG  < 21 ≤  ATCG  < 28 ≤  ATCG  < 37 ≤  ATCG