New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	= 974307	7 (0.030)	5 (0.020)	3/174	26.8	0.07	intergenic (+187/+72)	RCAP_rcc00884/RCAP_rcc00885	hypothetical protein/hypothetical protein
	?	NC_014034	2577280 =	117 (0.480)					intergenic (+202/‑227)	fdx/purU	ferredoxin VI/formyltetrahydrofolate deformylase
Rejected: Position hash score below cutoff.

TCGCCCCCCGGACCCCCCAGCGTATTTGCACCAAGAAAAAGCAGACGGGCGGGATCCGGCATGGCCG.TGCGCAGCGGCTTGTTTTCACCTTGCGACAAATATCCCGGGG..................................................................................................  >  NC_014034/974199‑974307 .................................................................................................AAATATCCCGGGGGTCCGGGGCGGAGCCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGCGGGAAGATCGCGCGCCCCGGAGCA  >  NC_014034/2577280‑2577377                                                                                                                                                                                                                             ACCCCCCAGCGTATTTGCACCAAGAAAAAGCAGACGGGCGGGATCCGGCATGGCCGCTGCGCAGCGGCTTGTTTTCACCTTGCGACAAATATCCCGGGGGg                                                                                                  >  1:3158369/1‑100 (MQ=0)             CCCCCCAGCGTATTTGCACCAAGAAAAAGCAGACGGGCGGGATCCGGCATGGCCGCTGCGCAGCGGCTTGTTTTCACCTTGCGACAAATATCCCGGGGGTC                                                                                                 <  1:2331296/101‑1 (MQ=0)               CCCCAGCGTATTTGCACCAAGAAAAAGCAGACGGGCGGGATCCGGCATGGCCGCTGCGCAGCGGCTTGTTTTCACCTTGCGACAAATATCCCGGGGGTCCG                                                                                               <  2:745163/101‑1 (MQ=0)                     CGTATTTGCACCAAGAAAAAGCAGACGGGCGGGATCCGGCATGGCCGCTGCGCAGCGGCTTGTTTTCACCTTGCGACAAATATCCCGGGGGTCCGGGGgcg                                                                                         >  1:1763827/1‑98 (MQ=0)                       TATTTGCACCAAGAAAAAGCAGACGGGCGGGATCCGGCATGGCCGCTGCGCAGCGGCTTGTTTTCACCTTGCGACAAATATCCCGGGGGTCCGGGGGGGgg                                                                                       >  1:917469/1‑99 (MQ=0)                                                                                                                                                                                                                  TCGCCCCCCGGACCCCCCAGCGTATTTGCACCAAGAAAAAGCAGACGGGCGGGATCCGGCATGGCCG.TGCGCAGCGGCTTGTTTTCACCTTGCGACAAATATCCCGGGG..................................................................................................  >  NC_014034/974199‑974307 .................................................................................................AAATATCCCGGGGGTCCGGGGCGGAGCCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGCGGGAAGATCGCGCGCCCCGGAGCA  >  NC_014034/2577280‑2577377 Base quality scores:  ATCG  < 3 ≤  ATCG  < 10 ≤  ATCG  < 23 ≤  ATCG  < 32 ≤  ATCG  < 41 ≤  ATCG