New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	= 974307	7 (0.030)	11 (0.050)	4/190	27.0	0.07	intergenic (+187/+72)	RCAP_rcc00884/RCAP_rcc00885	hypothetical protein/hypothetical protein
	?	NC_014034	2714722 =	279 (1.140)					intergenic (‑51/+28)	dht/amaB	dihydropyrimidinase/N‑carbamoyl‑L‑amino acid amidohydrolase
Rejected: Position hash score below cutoff.

CCCCGGACCCCCCAGCGTATTTGCACCAAGAAAAAGCAGACGGGCGGGATCCGGCATGGCCG.TGCGCAGCGGCTTGTTTTCACCTTGCGACAAATATCCCGGGG....................................................................................................  >  NC_014034/974204‑974307 ....................................................................................................CGGGGGTCCGGGGGCTGCGCCCCCGGCGCGCGGTCAGTCTACGACGACGGCGGTTTCCAGAACCGCATGCAAAAGCACATCCGCCCCCGCCGCCGCCCATTCGGG  >  NC_014034/2714722‑2714821                                                                                                                                                                                                                     ACCCCCCAGCGTATTTGCACCAAGAAAAAGCAGACGGGCGGGATCCGGCATGGCCGCTGCGCAGCGGCTTGTTTTCACCTTGCGACAAATATCCCGGGGGg                                                                                                    >  1:3158369/1‑100 (MQ=0)        CCCCCCAGCGTATTTGCACCAAGAAAAAGCAGACGGGCGGGATCCGGCATGGCCGCTGCGCAGCGGCTTGTTTTCACCTTGCGACAAATATCCCGGGGGTC                                                                                                   <  1:2331296/101‑1 (MQ=0)          CCCCAGCGTATTTGCACCAAGAAAAAGCAGACGGGCGGGATCCGGCATGGCCGCTGCGCAGCGGCTTGTTTTCACCTTGCGACAAATATCCCGGGGGTCCG                                                                                                 <  2:745163/101‑1 (MQ=0)                CGTATTTGCACCAAGAAAAAGCAGACGGGCGGGATCCGGCATGGCCGCTGCGCAGCGGCTTGTTTTCACCTTGCGACAAATATCCCGGGGGTCCGGGGGCg                                                                                           >  1:1763827/1‑100 (MQ=0)                CGTATTTGCACCAAGAAAAAGCAGACGGGCGGGATCCGGCATGGCCGCTGCGCAGCGGCTTGTTTTCACCTTGCGACAAATATCCCGGGGGGCCGGGGGCg                                                                                           >  2:1389024/1‑100 (MQ=0)                 GTATTTGCACCAAGAAAAAGCAGACGGGCGGGATCCGGCATGGCCGCTGCGCAGCGGCTTGTTTTCACCTTGCGACAAATATCCCGGGGGGCCGGGGGCgg                                                                                          >  1:2578562/1‑99 (MQ=0)                 GTATTTGCACCAAGAAAAAGCAGACGGGCGGGATCCGGCATGGCCGCTGCGCAGCGGCTTGTTTTCACCTTGCGACAAATATCCCGGAGGTCCGGGGGCgg                                                                                          >  1:4340899/1‑99 (MQ=0)                  TATTTGCACCAAGAAAAAGCAGACGGGCGGGATCCGGCATGGCCGCTGCGCAGCGGCTTGTTTTCACCTTGCGACAAATATCCCGGGGGTCCGGGGGgggg                                                                                         >  1:917469/1‑97 (MQ=0)                   ATTTGCACCAAGAAAAAGCAGACGGGCGGGATCCGGCATGGCCGCTGCGCAGCGGCTTGTTTTCACCTTGCGACAAATATCCCGGGGGTCCGGGGGCggag                                                                                        >  1:2198338/1‑97 (MQ=0)                   ATTTGCACCAAGAAAAAGCAGACGGGCGGGATCCGGCATGGCCGCTGCGCAGCGGCTTGTTTTCACCTTGCGACAAATATCCCGGGGGTCCGGGGGCggag                                                                                        >  2:467719/1‑97 (MQ=0)                    TTTGCACCAAGAAAAAGCAGACGGGCGGGATCCGGCATGGCCGCTGCGCAGCGGCTTGTTTTCACCTTGCGACAAATATCCCGGGGGTCCGGGGGCggagc                                                                                       >  1:4130630/1‑96 (MQ=0)                                                                                                                                                                                                               CCCCGGACCCCCCAGCGTATTTGCACCAAGAAAAAGCAGACGGGCGGGATCCGGCATGGCCG.TGCGCAGCGGCTTGTTTTCACCTTGCGACAAATATCCCGGGG....................................................................................................  >  NC_014034/974204‑974307 ....................................................................................................CGGGGGTCCGGGGGCTGCGCCCCCGGCGCGCGGTCAGTCTACGACGACGGCGGTTTCCAGAACCGCATGCAAAAGCACATCCGCCCCCGCCGCCGCCCATTCGGG  >  NC_014034/2714722‑2714821 Base quality scores:  ATCG  < 3 ≤  ATCG  < 8 ≤  ATCG  < 19 ≤  ATCG  < 31 ≤  ATCG  < 41 ≤  ATCG