| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_014034 | 510059 = | 136 (0.560) | 27 (0.110) | 3/198 | 28.5 | 0.21 | intergenic (+46/+141) | RCAP_rcc00475/RCAP_rcc00476 | acyl‑CoA dehydrogenase domain‑containing protein/hypothetical protein |
| ? | NC_014034 | 1253894 = | 65 (0.270) | intergenic (+52/+39) | RCAP_rcc01181/hisH | hypothetical protein/imidazole glycerol phosphate synthase subunit HisH | |||||
| Rejected: Position hash score below cutoff. | |||||||||||
Only 100 of 141 total aligned reads displayed.
GCGGATCGAAAGCGGGTCCGAGGGGGTGATGGGG.CTCTCGGCCGATCAGTTCTGAGCGGCAGGGGATTT.CGC.CCC.GGGCTT.GCGCC.C.GGGG.CGACCC.G.CC.GGGGGCTCCGCCCCCGGACCCCCTGACTTCAGATGCGTATTTGAGCCAAGAAAAAGCCG.ACAGGCGCTTTTGAGGTTCGGAAATTGAAAAGGGGCCCTGCC > NC_014034/509959‑510159
|
gcgGATCGAAAGCGGGTCCGAGGGGGTGATGGGG.CTCTCGGCCGATCAGTTCTGAGCGGCAGGGGATTT.CGC.CCC.GGGCTT.GCGCC.C.GGGG.CGACcc.g.cc.g > 2:2389116/1‑101 (MQ=255)
ggATCGAAAGCGGGTCCGAGGGGGTGATGGGG.CTCTCGGCCGATCAGTTCTGAGCGGCAGGGGATTT.CGC.CCC.GGGCTT.GCGCC.C.GGGG.CGACCC.G.CC.tgg > 1:4925934/1‑101 (MQ=255)
aTCGAAAGCGGGTCCGAGGGGGTGATGGGG.CTCTCGGCCGATCAGTTCTGAGCGGCAGGGGATTT.CGC.CCC.GGGCTT.GCGCC.C.GGGG.CGACCC.G.CC.cgggg > 2:823065/1‑101 (MQ=255)
cGAAAGCGGGTCCGAGGGGGTGATGGGG.CTCTCGGCCGATCAGTTCTGAGCGGCAGGGGATTT.CGC.CCC.GGGCTT.GCGCC.C.GGGG.CGACCC.G.CC.GGGGGCt < 2:497223/101‑1 (MQ=255)
gAAGGCGGGTCGGGGGGGGTGAGGGGG.CTCTCGGCCGATCAGTTCTGAGCGGCAGGGGTTTT.CGC.CCC.GGGCTT.GCGCC.C.GGGG.CGCCCC.G.CC.GGGGGCTc < 2:605604/101‑1 (MQ=37)
gAAAGCGGGTCCGAGGGGGTGATGGGG.CTCTCGGCCGATCAGTTCTGAGCGGCAGGGGATTT.CGC.CCC.GGGCTT.GCGCC.C.GGGG.CGGCCCGG.CC.ggggggc > 2:3541972/1‑99 (MQ=255)
gAAAGCGGGTCCGAGGGGGTGATGGGG.CTCTCGGCCGATCAGTTCTGAGCGGCAGGGGATTT.CGC.CCC.GGGCTT.GCGCC.C.GGGG.CGACCC.G.CC.GGGGGcgc > 2:857443/1‑99 (MQ=255)
aaaGCGGGTCCGAGGGGGTGATGGGG.CTCTCGGCCGATCAGTTCTGAGCGGCAGGGGATTT.CGC.CCC.GGGCTT.GCGCC.C.GGGG.CGACCC.G.CC.cgggggcgc > 2:2114819/1‑97 (MQ=255)
aaaGCGGGTCCGAGGGGGTGATGGGG.CTCTCGGCCGATCAGTTCTGAGCGGCAGGGGATTT.CGC.CCC.GGGCTT.GCGCC.C.GGGG.CGACCC.G.CC.GGGGGCGcc > 2:2403782/1‑101 (MQ=255)
aaaGCGGGCCCGGGGGGGTGAGGGGG.CTCTCGGCCGATCAGTTCTGAGCGGCGGGGGTTTT.CCC.CCG.GGGCTT.GCGCC.C.GGGG.CGCCCC.G.CC.GGGGGCTcc < 2:4047147/101‑1 (MQ=37)
aaGCGGGTCCGAGGGGGTGATGGGG.CTCTCGGCCGATCAGTTCTGAGCGGCAGGGGATTT.CGC.CCC.GGGCTT.GCGCC.C.GGGG.CGACCC.G.CC.cgggggggcc > 1:478651/1‑96 (MQ=255)
aGCGGGTCCGAGGGGGTGATGGGG.CTCTCGGCCGATCAGTTCTGAGCGGCAGGGGATTT.CGC.CCC.GGGCTT.GCGCC.C.GGGG.CGACCC.G.CC.GGGGGGTCCGc > 2:2296680/1‑101 (MQ=255)
gggggTCGGGGGGGGTGATGGGG.CTCTCGGCCGATCAGTTCGGAGCGGCGGGGGTTTC.CCC.CCG.GGGCTT.GCGCC.G.GGGG.CGCCCC.G.CC.GGGGGCTCCGcc < 1:544769/99‑1 (MQ=25)
gCGGGCCCGGGGGGTGGAGGGCG.CTCTCGGCCGAGCAGTTCGGAGCGGCGGGGGTTTC.CCC.CCG.GGGCTT.GCGCC.G.GGGG.CGCCCC.G.CC.GGGGGCTCCGcc < 2:2556876/101‑1 (MQ=16)
ggggccggggggggTGATGGGG.CTCTCGGCCGATCATTTCTGAGGGGCGGGGGATTC.CGC.CCG.GGGCTT.GCGCC.C.GGGG.CGCCCC.G.CC.GGGGGCTCCGccc < 2:3673940/92‑1 (MQ=21)
cGGGTCCGAGGGGGTGATGGGG.CTCTCGGCCGATCAGTTCTGAGCGGCAGGGGATTT.CGC.CCC.GGGCTT.GCGCC.C.GGGG.GGACCC.G.CC.cgggggggccgcc > 2:2798196/1‑93 (MQ=38)
gggTCCGAGGGGGTGATGGGG.CTCTCGGCCGATCAGTTCTGAGCGGCAGGGGATTT.CGC.CCC.GGGCTT.GCGCC.C.GGGG.CGACCC.G.CC.GGGGGGGCCGgccc > 2:425842/1‑101 (MQ=255)
ggtcgggggggTGGTGGGGCCTCTGGGCCGACAGGTTCTGAGCGG.GGGGGTTTT.CCC.CCC.GGGCTTGGCCCC.G.GGGG.CGCCCC.G.CC.GGGGGCTCCGccccc < 1:2079426/95‑1 (MQ=12)
tCCGAGGGGGTGATGGGG.CTCTCGGCCGATCAGTTCTGAGCGGCAGGGGATTT.CGC.CCC.GGGCTT.GCGCC.C.GGGG.CGACCC.G.CC.GGGGGCGGCGccccccg > 2:651123/1‑99 (MQ=255)
gccGGGGGGGTGGTGGGG.CTCTCGGCCGATCATTTCTGAGCGGGAGGGGTTTT.CCC.CCG.GGGCTG.GCGCC.G.GGGG.CGCCCC.G.CC.GGGGGCTCCGCCCCCgg < 2:448908/100‑1 (MQ=25)
ccGAGGGGGTGATGGGG.CTCTCGGCCGATCAGTTCTGAGCGGCAGGGGATTT.CGC.CCC.GGGCTT.GCGCC.C.GGGG.CGACCC.G.CC.CGGGGGGGCGcccccccc > 2:198061/1‑98 (MQ=37)
cgggggggTGATGGGG.CTCTCGGCCGATCAGTTCTGAGCGGCAGGGGATTT.CGC.CCC.GGGCTT.GCGCC.C.GGGG.CGACCC.G.CC.GGGGGCTCCGCCCCCGGAc < 2:209927/98‑1 (MQ=255)
aGGGGGTGATGGGG.CTCTCGGCCGATCAGTTCTGAGCGGCAGGGGATTT.CGC.CCC.GGGCTT.GCGCC.C.GGGG.CGACCC.GCCC.GGGGGCGCCCCCCCCgcccc > 2:2936993/1‑97 (MQ=37)
aGGGGGTGATGGGG.CTCTCGGCCGATCAGTTCTGAGCGGCAGGGGAATT.CGC.CCC.GGGCTT.GCTCC.C.GGGG.CGGCCC.G.CC.GGGGGCCCCGCCCCCGGAccc > 2:2491476/1‑101 (MQ=255)
gggggTGATGGGC.CTCTCGGCCGGTCACTTCTGGGCGGCGGTGCTTTC.CCC.CCC.GGGCTG.GCGCC.C.GGGG.CGCCCC.G.CC.GGGGGCTCCGCCCCCGGAcccc < 2:4515530/101‑1 (MQ=21)
ggggggggggg.CTCTCGCCCGATCGTTTCTGGGGGGCGGGGGTTTC.CGC.CCC.GGGCTT.GCGCC.G.GGGG.CGCCCC.G.CC.GGGGGCTCCGCCCCCGGACCCCCt < 2:1083097/94‑1 (MQ=18)
gggTGTGGGGG.CTCTCGGCCGTGCTGTTCGGGGGGGGGGGGGATTC.CCC.CCC.GGTCTG.GCGCC.C.GGGG.CCCCCC.G.CC.GGGGGCTCCGCCCCCGGACCCCCt < 2:866594/101‑1 (MQ=16)
gggTGATGGGG.CTCGCGGCCGATCAGTTCGGGGCGGCAGGGGATTC.CCC.CCC.GGGCTC.CCGCC.G.GGGG.CGCCCC.G.CC.GGGGGCTCCGCCCCCGGACCCCCt < 2:1274365/101‑1 (MQ=25)
ggtggggggg.CTCTCGGCCGATCAGTTCGGAGGGGCGGGGGTTTC.CGC.CCG.GGGCTT.GCGCC.G.GGGG.CGACCC.G.CC.GGGGGCTCCGCCCCCGGACCCCCTg < 2:1551961/95‑1 (MQ=21)
ggTGGTGGGGCCTCTCGGCCGATCGTTTCTGAGCGCCGGGGCTTTC.CCC.CCC.GGGCTG.CCCCC.G.GGGG.CGCCCC.G.CC.GGGGGCTCCGCCCCCGGACCCCCt < 2:1845075/101‑1 (MQ=12)
tggggggg.CCCTCGGCCGATCAGTTCTGAGCGGCGGGGGTTTC.CCC.CCG.GGGCTT.GCGCC.G.GGGG.CGCCCC.G.CC.GGGGGCTCCGCCCCCGGACCCCCTGAc < 1:425907/97‑1 (MQ=21)
ggtGGGG.CTCGGGCCCGGTGAGTTGTGGGCGGCGGGGGTTCT.CCC.CCG.GGGCTT.GCCCC.G.GGGG.CGCCCC.G.CC.GGGGGCTCCGCCCCCGGACCCCCTGACt < 2:2672340/99‑1 (MQ=12)
gATGGGG.CTCTCGGCCGATCAGTTCTGAGCGGCAGGGGATTT.CGC.CCC.GGGCTT.GCGCC.C.GGGG.CGACCC.GCCC.GGGGGGCCCCCCCCCGGCccccccccc > 1:3078842/1‑97 (MQ=25)
aggggg.CTCCGGGCCGAGCAGTTCGGGTGGGCGGGGGTTTC.CCC.CCC.GGGCTC.CCCCC.C.GGGG.CCCCCC.G.CC.GGGGGCTCCGCCCCCGGACCCCCTGACtt < 1:2101096/99‑1 (MQ=12)
aTGGGG.CTCTCGGCCGATCAGTTCTGAGCGGCAGGGGATTT.CGC.CCC.GGGCTT.GCGCC.C.GGGG.CGACCC.G.CCGGGGGGGTCCCCCCCCCGCccccccgccc > 2:2198487/1‑96 (MQ=25)
gggg.CTCTCGCCCGATCAGGTCGGGGCGGCGGGGGTTCC.CGC.CCG.GGTCTG.GCGCC.G.GGGC.CCCCCC.G.CC.GGGGGCTCCGCCCCCGGACCCCCTGACTTCa < 2:1715426/101‑1 (MQ=16)
ggg.CTCTCGGCCGATCAGTGCGGGGGGGGGGGGTTTTC.CGC.CCG.GGGCTG.GCGCC.G.GGGG.CGCCCC.G.CC.GGGGGCTCCGCCCCCGGACCCCCTGACTTCAg < 1:2050830/101‑1 (MQ=16)
gcg.CTCGCGGCGGCTCATTTCGGAGCGGGGGGGTTTTC.CCC.CCC.GGGCTT.GCGCC.G.GGGG.CCCCCC.G.CC.GGGGGCTCCGCCCCCGGACCCCCTGACTTCAg < 2:1815239/99‑1 (MQ=16)
tctcGGCCGATCGTTTCTGAGCGGGAGGTGCTTC.CCC.CCC.GGGCTT.GCGCC.C.GGGG.CGCCCC.G.CC.GGGGGCTCCGCCCCCGGACCCCCTGACTTCAGATGc < 2:2960150/101‑1 (MQ=25)
tctcGGCCGATCATTTCGGCGCGGCGGGGGTTTC.CCC.CCC.GGGCTG.GCCCC.G.GGGG.CGCCCC.G.CC.GGGGGCTCCGCCCCCGGACCCCCTGACTTCAGATGc < 1:4936699/101‑1 (MQ=21)
ggggCCGATCAGTTGGGGGGGGGGGGGAATTT.CGC.CCG.GGGTTG.GCCCC.G.GGGC.CAACCC.G.CC.GGGGGCTCCGCCCCCGGACCCCCTGACTTCAGATGCGt < 1:131772/99‑1 (MQ=16)
cGGCCTATCAGTGCGGGGGGGCGGGGGTTTC.CCC.CCG.GGGCTG.CCCCC.C.GGGG.CGCCCC.G.CC.GGGGGCTCCGCCCCCGGACCCCCTGACTTCAGATGCGTa < 1:299200/101‑1 (MQ=16)
ggCCGATGGGTTCGGGGGGGCGGGGGTTTC.CCC.CCC.GGGCTG.GCGCC.G.GGGG.CGCCCC.G.CC.GGGGGCTCCGCCCCCGGACCCCCTGACTTCAGATGCGTAt < 1:4998950/101‑1 (MQ=21)
cggATAAGTTCGGAGGGGCGGGGTTTTT.CCC.CCG.GGGCTG.GCGCC.G.GGGC.CGCCCC.G.CC.GGGGGCTCCGCCCCCGGACCCCCTGACTTCAGATGCGTAttt < 2:1645240/99‑1 (MQ=19)
ggATCGGTTTTGGGCGGCGGGGTTTTT.CGC.CCC.GGGCTG.GCCCC.G.GGGG.CGCCCC.G.CC.GGGGGCTCCGCCCCCGGACCCCCTGACTTCAGATGCGTATTTg < 1:2176856/100‑1 (MQ=25)
aTCATTCCTGAGCGGCGGGGGTTTC.CGC.CCC.GGGCTG.GCGCC.C.GGGG.CGCCCC.G.CC.GGGGGCTCCGCCCCCGGACCCCCTGACTTCAGATGCGTATTTGAg < 2:588669/101‑1 (MQ=25)
ttagttgggAGCGGCAGGGGTTTC.CCC.CCG.GGGCTT.GCGCC.G.GGGG.CCCCCC.G.CC.GGGGGCTCCGCCCCCGGACCCCCTGACTTCAGATGCGTATTTGAGc < 2:4328470/93‑1 (MQ=25)
tgTTCTGGGGGGCGGGGGTTTC.CCC.CCG.GGGCTG.GCGCC.G.GGGG.CGCCCC.G.CC.GGGGGCTCCGCCCCCGGACCCCCTGACTTCAGATGCGTATTTGAGCCa < 2:4862042/100‑1 (MQ=21)
ttCTGGGCGGGGGGGGTTTC.CGC.CCG.GGGCTG.GCGCC.G.GGGG.CCCCCC.G.CC.GGGGGCTCCGCCCCCGGACCCCCTGACTTCAGATGCGTATTTGAGCCAAg < 2:1075297/101‑1 (MQ=25)
tggggggggCGGGGGTTTC.CCC.CCG.GGGCTC.GCGCC.G.GGGG.CGCCCC.G.CC.GGGGGCTCCGCCCCCGGACCCCCTGACTTCAGATGCGTATTTGAGCCAAGa < 1:4516170/94‑1 (MQ=21)
gtggggggCGGGGGTTTC.CCC.CCC.GGGCTT.CCGCC.G.GGGG.CGCCCC.G.CC.GGGGGCTCCGCCCCCGGACCCCCTGACTTCAGATGCGTATTTGAGCCAAGaa < 1:328962/95‑1 (MQ=25)
gggggggCAGGGGTTTC.CCC.CCC.GGTCTT.GCCCC.G.GGGG.CGCCCC.G.CC.GGGGGCTCCGCCCCCGGACCCCCTGACTTCAGATGCGTATTTGAGCCAAGaaa < 1:767565/96‑1 (MQ=25)
cgggggggcggggGTTT.CCC.CCC.GGGGCT.GCCCC.CGGGGG.CGCCCC.G.CC.GGGGGCTCCGCCCCCGGACCCCCTGACTTCAGATGCGTATTTGAGCCAAGaa < 1:1389194/92‑1 (MQ=21)
ggggggggggggTTTG.CGC.CCG.GGCCTG.GCGCC.C.GGGG.CGCCCC.G.CC.GGGGGCTCCGCCCCCGGACCCCCTGACTTCAGATGCGTATTTGAGCCAAGaaaa < 2:4312265/93‑1 (MQ=25)
ggggggggggggTTTC.CCC.CCC.GGGCTC.GCGCC.G.GGGG.CGCCCC.G.CC.GGGGGCTCCGCCCCCGGACCCCCTGACTTCAGATGCGTATTTGAGCCAAGaaaa < 1:3826058/93‑1 (MQ=25)
gggggggggggGTTT.CCC.CCCGGGGCTG.GCCCC.G.GGGG.CGCCCC.G.CC.GGGGGCTCCGCCCCCGGACCCCCTGACTTCAGATGCGTATTTGAGCCAAGaaaa < 1:394231/94‑1 (MQ=25)
ggcggggggggTTTC.CGC.CCG.GGGCTG.GCCCC.G.GGGC.CCCCCC.G.CC.GGGGGCTCCGCCCCCGGACCCCCTGACTTCAGATGCGTATTTGAGCCAAGaaaaa < 2:1805965/94‑1 (MQ=25)
ggcggggggggTTTC.CCC.CCC.GGGCTC.GCGCC.G.GGGC.CGCCCC.G.CC.GGGGGCTCCGCCCCCGGACCCCCTGACTTCAGATGCGTATTTGAGCCAAGaaaaa < 1:3366739/94‑1 (MQ=25)
aGGGGATTT.CGC.CCC.GGGCTT.GCGCC.C.GGGG.CGACCC.GCCC.GGGGGCGCGCCCCCCCGGCCCCCCGCCTCCACGTGCGTCTTTTAGCCACGaaaaaaagca > 2:1401843/1‑96 (MQ=12)
aGGGGATTT.CGC.CCC.GGGCTT.GCGCC.C.GGGG.CGACCC.G.CC.GGGGGCTCCACCCCCGGACCCCCCGACTTCAGATGCGTATTTGAGCCAAGAAAAAACCG.Ac > 2:3180601/1‑101 (MQ=255)
ggggTTTTCCGC.CCC.GGGCTG.GCGCC.G.GGGG.CCCCCC.G.CC.GGGGGCTCCGCCCCCGGACCCCCTGACTTCAGATGCGTATTTGAGCCAAGAAAAAGCCG.Ac < 2:478586/101‑1 (MQ=37)
ggggTTTT.CCC.CCC.GGGCCT.CCCCC.C.GGGGCCGCCCC.G.CC.GGGGGCTCCGCCCCCGGACCCCCTGACTTCAGATGCGTATTTGAGCCAAGAAAAAGCCG.Ac < 1:4018534/101‑1 (MQ=37)
gcgctttccGC.CCT.CGGCTT.GCGCC.C.GGGG.CCCCCC.G.CC.GGGGGCTCCGCCCCCGGACCCCCTGACTTCAGATGCGTATTTGAGCCAAGAAAAAGCCG.ACa < 2:4170609/93‑1 (MQ=37)
gggttt.CGCGCCC.CGGCTT.GCCCC.CGGGGG.CGCCCC.G.CC.GGGGGCTCCGCCCCCGGACCCCCTGACTTCAGATGCGTATTTGAGCCAAGAAAAAGCCG.ACa < 1:73097/98‑1 (MQ=25)
ggtttccGC.CCG.GGGTTT.GCCCC.C.GGGG.CGCCCC.G.CC.GGGGGCTCCGCCCCCGGACCCCCTGACTTCAGATGCGTATTTGAGCCAAGAAAAAGCCG.ACAgg < 1:2288871/95‑1 (MQ=37)
aTTT.CGC.CCC.GGGCTT.GCGCC.C.GGGG.CGACCC.G.CC.GGGGGGCCCCCCCCCGGGACCCCCGCCTTCCAATGCGACTTTTATCCAAAAAAAAACCGCACAggg > 2:804852/1‑100 (MQ=9)
aTTT.CGC.CCC.GGGCTT.GCGCC.C.GGGG.CGACCC.G.CC.GGGGGCTCCGCCCCCCGACCCCCTGACTTCAGATGCGTATTTGAGCCAAGAAAAAGACG.ACAGgcg > 2:2970245/1‑101 (MQ=255)
tttgccc.ccg.GGGCGG.GCGCC.G.GGGG.CGCCCC.G.CC.GGGGGCTCCGCCCCCGGACCCCCTGACTTCAGATGCGTATTTGAGCCAAGAAAAAGCCG.ACAGgcg < 1:2656332/95‑1 (MQ=37)
ttgcccc.ccg.GGGCTG.CCGCC.G.GGGC.CGCCCC.G.CC.GGGGGCTCCGCCCCCGGACCCCCTGACTTCAGATGCGTATTTGAGCCAAGAAAAAGCCG.ACAGgcg < 1:4139441/95‑1 (MQ=37)
tcccc.ccc.GGCCTC.GCGCC.G.GGGG.CCCCCC.G.CC.GGGGGCTCCGCCCCCGGACCCCCTGACTTCAGATGCGTATTTGAGCCAAGAAAAAGCCG.ACAGGCGCt < 1:125021/97‑1 (MQ=37)
gcccc.ccc.GGGCTC.GCCCC.G.GGGG.CCCCCC.G.CC.GGGGGCTCCGCCCCCGGACCCCCTGACTTCAGATGCGTATTTGAGCCAAGAAAAAGCCG.ACAGGCGCt < 1:418132/97‑1 (MQ=38)
c.ccc.GGCCTG.CCGCC.C.GGGC.CCCCCC.G.CC.GGGGGCTCCGCCCCCGGACCCCCTGACTTCAGATGCGTATTTGAGCCAAGAAAAAGCCG.ACAGGCGCTTTTg < 1:1533869/101‑1 (MQ=38)
ccc.GGGGTT.CCCCC.CGGGGG.CCCCCC.G.CC.GGGGGCTCCACCCCCGGACCCCCTGACTTCAGATGCGTATTTGAGCCAAGAAAAAGCCG.ACAGGCGCTTTTg < 1:3180852/101‑1 (MQ=37)
cc.GGGGTT.GGGCCGC.GGGC.CCCCCC.G.CC.GGGGGCTCCGCCCCCGGACCCCCTGACTTCAGATGCGTATTTGAGCCAAGAAAAAGCCG.ACAGGCGCTTTTGa < 2:3674488/101‑1 (MQ=37)
cggggCTG.GCCCC.G.GGGG.CGCCCC.G.CC.GGGGGCTCCGCCCCCGGACCCCCTGACTTCAGATGCGTATTTGAGCCAAGAAAAAGCCG.ACAGGCGCTTTTGAg < 2:1465176/99‑1 (MQ=38)
gccgcC.G.GGGG.CCCCCC.G.CC.GGGGGCTCCGCCCCCGGACCCCCTGACTTCAGATGCGTATTTGAGCCAAGAAAAAGCCG.ACAGGCGCTTTTGAGGTTCGGa < 1:3708459/99‑1 (MQ=255)
ctcgcgcgggggg.CGCCCC.G.CC.GGGGGCTCCTCCCCCGGACCCCCTGACTTCAGATGCGTATTTGAGCCAAGAAAAAGCCG.ACAGGCGCTTTTGAGGTTCg < 1:4105603/92‑1 (MQ=38)
gcccc.c.GGGGCCGCCCC.G.CC.GGGGGCTCCGCCCCCGGACCCCCTGACTTCAGATGCGTATTTGAGCCAAGAAAAAGCCG.ACAGGCGCTTTTGAGGTTCGGa < 1:61156/98‑1 (MQ=38)
ccgcC.G.GGCG.CGCCCC.G.CC.GGGGGCTCCGCCCCCGGACCCCCTGACTTCAGATGCGTATTTGAGCCAAGAAAAAGCCG.ACAGGCGCTTTTGAGGTTCGGaa < 2:355765/100‑1 (MQ=255)
cgggggg.CCCCCC.G.CC.GGGGGCTCCGCCCCCGGACCCCCTGACTTCAGATGCGTATTTGAGCCAAGAAAAAGCCG.ACAGGCGCTTTTGAGGTTCGGAAAtt < 1:369371/98‑1 (MQ=255)
ccggggg.CCCCCC.G.CC.GGGGGCTCCGCCCCCGGACCCCCTGACTTCAGATGCGTATTTGAGCCAAGAAAAAGCCG.ACAGGCGCTTTTGAGGTTCGGAAAtt < 1:2795865/98‑1 (MQ=255)
ccggggc.CGCCCC.G.CC.GGGGGCTCCGCCCCCGGACCCCCTGACTTCAGATGCGTATTTGAGCCAAGAAAAAGCCG.ACAGGCGCTTTTGAGGTTCGGAAAtt < 2:2845370/98‑1 (MQ=255)
c.GGGG.CGCCCC.G.CC.GGGGGCTCCGCCCCCGGACCCCCTGACTTCAGATGCGTATTTGAGCCAAGAAAAAGCCG.ACAGGCGCTTTTGAGGTTCGGAAATTGa < 1:2717700/101‑1 (MQ=255)
gggg.CCCCCC.G.CC.GGGGGCTCCGCCCCCGGACCCCCTGACTTCAGATGCGTATTTGAGCCAAGAAAAAGCCG.ACAGGCGCTTTTGAGGTTCGGAAATTGaa < 2:1508080/101‑1 (MQ=255)
gggc.CGCCCC.G.CC.GGGGGCTCCGCCCCCGGACCCCCTGACTTCAGATGCGTATTTGAGCCAAGAAAAAGCCG.ACAGGCGCTTTTGAGGTTCGGAAATTGaa < 1:1738519/101‑1 (MQ=255)
ggg.CGACCC.G.CC..GGGGCTCCGCCCCCGGACCCCCTGACTTCAGATGCGTATTTGAGCCAAGAAAAAGCCG.ACAGGCGCTTTTGAGGTTCGGAAATTGaaaa > 2:4285746/1‑101 (MQ=255)
gggcccccc.G.CC.GGGGGCTCCGCCCCCGGACCCCCTGACTTCAGATGCGTATTTGAGCCAAGAAAAAGCCG.ACAGGCGCTTTTGAGGTTCGGAAATTGaaa < 1:526399/95‑1 (MQ=255)
gggcccacc.g.cc.gGGGGCTCCGCCCCCGGACCCCCTGACTTCAGATGCGTATTTGAGCCAAGAAAAAGCCG.ACAGGCGCTTTTGAGGTTCGGAAATTGaaa < 1:857545/94‑1 (MQ=255)
gcgcccccc.G.CC.GGGGGCTCCGCCCCCGGACCCCCTGACTTCAGATGCGTATTTGAGCCAAGAAAAAGCCG.ACAGGCGCTTTTGAGGTTCGGAAATTGaaa < 1:27399/95‑1 (MQ=255)
cccccc.G.CC.GGGGGCTCCGCCCCCGGACCCCCTGACTTCAGATGCGTATTTGAGCCAAGAAAAAGCCG.ACAGGCGCTTTTGAGGTTCGGAAATTGAAAAgg < 2:3468164/98‑1 (MQ=255)
gccc.G.CC.GGGGGCTCCGCCCCCGGACCCCCTGACTTCAGATGTGTATTTGAGCCAAGAAAAAGCCG.ACAGGCGCTTTTGAGGTTCGGAAATTGAAAAgggg < 1:5046399/100‑1 (MQ=255)
cc.g.cc.gGGGGCTCCGCCCCCGGACCCCCTGACTTCAGATGCGTATTTGAGCCAAGAAAAAGCCG.ACAGGCGCTTTTGAGGTTCGGAAATTGAAAAGGGGcc < 1:4375109/101‑1 (MQ=255)
g.cc.gGGGGCTCCGCCCCCGGACCCCCTGACTTCAGATGCGTATTTGAGCCAAGAAAAAGCCG.ACAGGCGCTTTTGAGGTTCGGAAATTGAAAAGGGGCCCt > 2:1560324/1‑101 (MQ=255)
g.cc.gGGGGCTCCGCCCCCGGACCCCCTGACTTCAGATGCGTATTTGAGCCAAGAAAAAGCCG.ACAGGCGCTTTTGAGGTTCGGAAATTGAAAAGGGGCCCt > 2:3042483/1‑101 (MQ=255)
cc.gGGGGCTCCGCCCCCGGACCCCCTGACTTCAGATGCGTATTTGAGCCAAGAAAAAGCCG.ACAGGCGCTTTTGAGGTTCGGAAATTGAAAAGGGGCCCTg < 1:2461231/101‑1 (MQ=255)
cc.gGGGGCTCCGCCCCCGGACCCCCTGACTTCAGATGCGTATTTGAGCCAAGAAAAAGCCG.ACAGGCGCTTTTGAGGTTCGGAAATTGAAAAGGGGCCCTg < 2:3999172/101‑1 (MQ=255)
cc.gGGGGCACCGCCCCCGGACCCCCTGACGTCAGATGCGTATTTGAGCCAAGAAAAAGCCG.ACAGGCGCTTTTGAGGTTCGGAAATTGAAAAGGGGCCCTg < 1:898066/101‑1 (MQ=255)
gggggCTCCGCCCCCGGACCCCCTGACTTCAGATGCGTATTTGAGCCAAGAAAAAGCCG.ACAGGCGCTTTTGAGGTTCGGAAATTGAAAAGGGGCCCTGcc > 1:617810/1‑101 (MQ=255)
gggggCTCCGCCCCCGGACCCCCTGACTTCAGATGCGTATTTGAGCCAAGAAAAAGCCG.ACAGGCGCTTTTGAGGTTCGGAAATTGAAAAGGGGCCCTGcc > 2:2309615/1‑101 (MQ=255)
gggggCCCCGCCCCCGGACCCCCTGACTTCAGATGCGTATTTGAGCCAAGAAAAAGCCG.ACAGGCGCTTTTGAGGTTCGGAAATTGAAAAGGGGCCCTGcc < 2:1884336/101‑1 (MQ=255)
|
GCGGATCGAAAGCGGGTCCGAGGGGGTGATGGGG.CTCTCGGCCGATCAGTTCTGAGCGGCAGGGGATTT.CGC.CCC.GGGCTT.GCGCC.C.GGGG.CGACCC.G.CC.GGGGGCTCCGCCCCCGGACCCCCTGACTTCAGATGCGTATTTGAGCCAAGAAAAAGCCG.ACAGGCGCTTTTGAGGTTCGGAAATTGAAAAGGGGCCCTGCC > NC_014034/509959‑510159
Base quality scores:
ATCG
< 3 ≤
ATCG
< 20 ≤
ATCG
< 29 ≤
ATCG
< 34 ≤
ATCG
< 41 ≤
ATCG
|