New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 1396968 =183 (1.150)57 (0.360) 11/130 16.6 0.26 coding (850/1578 nt) RCAP_rcc01307 hypothetical protein
?NC_014034 = 1397664 150 (0.610)coding (1546/1578 nt) RCAP_rcc01307 hypothetical protein
Rejected: Position hash score below cutoff.

Only 100 of 465 total aligned reads displayed.

CGGTCCAGAGATAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA..GC.CT.GCGCG.GC.CGCA.TCGGCT.TCCGC.CTG..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCG.TCGTTGGTCAGCCGGAC.GATGTCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGC  >  NC_014034/1396868‑1397068
                                                                                                               |                                                                                                       
cGGTCCAGAGATAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA..GC.CT.GCGCG.GC.CGCA.TCGGCT.TCCGC.CTG..CGTg                                                                                                         >  1:3662621/1‑101 (MQ=255)
    ccAGAGATAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA..GC.CT.GCGCG.GC.CGCA.TCGGCT.TCCGC.CTG..CGTG.GTCg                                                                                                    >  1:440449/1‑101 (MQ=255)
    ccAGAGATAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA..GC.CT.GCGCG.GC.CGCA.TCGGCT.TCCGC.CTG..CGTG.GTCg                                                                                                    >  1:3157978/1‑101 (MQ=255)
    ccAGAGATAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA..GC.CT.GCGCG.GC.CGCA.TCGGCT.TCCGC.CTG..CGTG.GTCg                                                                                                    >  2:4513459/1‑101 (MQ=255)
      agagATAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA..GC.CT.GCGCG.GC.CGCA.TCGGCT.TCCGC.CTG..CGTG.GTCGCt                                                                                                  >  1:1299497/1‑101 (MQ=255)
         gaTAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA..GC.CT.GCGCG.GC.CGCA.TCGGCT.TCCGC.CCG..CGGg.ggccccccc                                                                                               >  1:3424814/1‑93 (MQ=37)
          aTAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA..GC.CT.GCGCG.GC.CGCA.TCGGCT.TCCGC.CTC..CGTG.GGCGCTcccc                                                                                              >  2:1226999/1‑101 (MQ=255)
                  cgcgGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA..GC.CT.GCGCG.GC.CGCA.TCGGCT.TCCGC.CTG..CGTG.GTCGCTCCCCCCGCgggg                                                                                      <  1:1988471/101‑1 (MQ=255)
                     ggACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA..GC.CT.GCGCG.GC.CGCA.TCGGCT.TCCGC.CTG..CGTG.GTCGCTCCCCCCGCGGGGGCg                                                                                   >  2:2226839/1‑101 (MQ=255)
                      gACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA..GC.CT.GCGCG.GC.CGCA.TCGGCT.TCCGC.CTG..CGTG.GTCGCTCCCCCCGCGGGGGCGt                                                                                  <  2:1809747/101‑1 (MQ=255)
                        cctcctCAGACGTCGCCCCCCCCGCGGGGGCGTGGATCGAAACA..GC.CT.GCGCG.GC.CCCA.TCGGCT.TCCGC.CTG..CGTG.GTCGCTCCCCCCGCGGGGGCGTgg                                                                                <  2:4993851/101‑1 (MQ=255)
                         tcgcggttgcGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAT.GG.CTATGGCG.GC.AGTG.TCAGGT.T.TTC.CAG..CGGC.GTCGCTCCCCCCGCGGGGGCGTgg                                                                                <  1:4696864/92‑1 (MQ=0)
                         tcgcggttgcGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAT.GG.CTATGGCG.GC.AGTG.TCAGGT.T.TTC.CAG..CGGC.GTCGCTCCCCCCGCGGGGGCGTgg                                                                                <  2:409452/92‑1 (MQ=0)
                         ggtcaacactgTCGCCCCCCCCGCGGGGGCGTGGATCGAAAC...GC.TG.GCGCGCGC.CGCG.CCGGATCTTTGT.CTG..CGCG.GTCGCTCCCCCCGCGGGGGCGTgg                                                                                <  2:3587270/91‑1 (MQ=9)
                          cgcggttgcGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAT.GG.CTATGGCG.GC.AGTG.TCAGGT.T.TTC.CAG..CGGC.GTCGCTCCCCCCGCGGGGGCGTGGa                                                                               >  1:308969/9‑101 (MQ=2)
                          ccctcAGACGTCGCCCCCCCCGGGGGGGCGTGGATCGAAACA..GC.CT.GCGCG.GC.CGCA.TCGGCT.TCCGC.CTG..CGTG.GTCGCTCCCCCCGC.GGGGCGTGGATc                                                                             <  2:41905/100‑1 (MQ=38)
                           tggccccggTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA...A.CT.GACC...C.GGCA.ACGGCC.TATGCGCTGGACGTG.GTCGCTCCCCCCGCGGGGGCGTGGATc                                                                             <  1:3217404/93‑1 (MQ=2)
                           tggccccggTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA...A.CT.GACC...C.GGCA.ACGGCC.TATGCGCTGGACGTG.GTCGCTCCCCCCGCGGGGGCGTGGATc                                                                             >  1:1501469/9‑101 (MQ=2)
                           tcaccactgTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC...GC.TG.GCGCGCGC.CGCG.CCGGATCTTTGT.CTG..CGCG.GTCGCTCCCCCCGCGGGGGCGTGGAt                                                                              <  1:1344756/93‑1 (MQ=9)
                           tcaacactgTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC...GC.TG.GCGCGCGC.CGCG.CCGGATCTTTGT.CTG..CGCG.GTCGCTCCCCCCGCGGGGGGGTgggc                                                                              >  2:4596172/9‑99 (MQ=9)
                           cctcAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA..GC.CT.GCGCG.GC.CGCA.TCGGCT.TCCGC.CTG..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATc                                                                             >  2:2606539/1‑101 (MQ=255)
                            ctcAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA..GC.CT.GCGCG.GC.CGCA.TCGGCT.TCCGC.CTG..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCg                                                                            <  1:2816395/101‑1 (MQ=255)
                            caacactgTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC...GC.TG.GCGCGCGC.CGCG.CCGGATCTTTGT.CTG..CGCG.GTCGCTCCCCCCGCGGGGGCGTGGATc                                                                             <  2:951001/94‑1 (MQ=9)
                            caacactgTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC...GC.TG.GCGCGCGC.CGCG.CCGGATCTTTGT.CTG..CGCG.GTCGCTCCCCCCGCGGGGGCGTGGATc                                                                             <  2:2347530/94‑1 (MQ=9)
                             ggttgcGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAT.GG.CTATGGCG.GC.AGTG.TCAGGT.T.TTC.CAG..CGGC.GTCGCTCCCCCCGCGGGGGCGTGGATCg                                                                            >  1:2327536/6‑101 (MQ=2)
                             gccccggTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA...A.CT.GACC...C.GGCA.ACGGCC.TATGCGCTGGACGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGa                                                                           >  2:3991955/7‑101 (MQ=2)
                             ccAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA..GC.CT.GCGCG.GC.CGCA.TCGGCT.TCCGC.CTG..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGa                                                                           <  1:2218559/100‑1 (MQ=255)
                              cgcccggcGCTCCCCCCGCGGGGGCGTGGATCGAAACT..GC.GT.GCGCG.CCATGAATTCATCG.AGCGC.CAT..CGAGCGTCGCTCCCCCCGCGGGGGCGTGGATc                                                                             <  2:4786259/94‑1 (MQ=2)
                              cAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA..GC.CT.GCGCG.GC.CGCA.TCGGCT.TCCGC.CTG..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGaa                                                                          >  1:3260658/1‑101 (MQ=255)
                              cAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA..GC.CT.GCGCG.GC.CGCA.TCGGCT.TCCGC.CTG..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGaa                                                                          >  1:2062391/1‑101 (MQ=255)
                              acactgTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC...GC.TG.GCGCGCGC.CGCG.CCGGATCTTTGT.CTG..CGCG.GTCGCTCCCCCCGCGGGGGCGTGGATCGa                                                                           >  1:1521890/6‑101 (MQ=9)
                               cccggTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA...A.CT.GACC...C.GGCA.ACGGCC.TATGCGCTGGACGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGaaa                                                                         <  1:903933/97‑1 (MQ=2)
                                tgcGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAT.GG.CTATGGCG.GC.AGTG.TCAGGT.T.TTC.CAG..CGGC.GGCGCTCCCCCCGCGGGGGCGTGGATCGaaa                                                                         >  2:290430/3‑101 (MQ=2)
                                gACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA..GC.CT.GCGCG.GC.CGCA.TCGGCT.TCCGC.CTG..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAAc                                                                        <  1:622073/101‑1 (MQ=255)
                                 cggTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA...A.CT.GACC...C.GGCA.ACGGCC.TATGCGCTGGACGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAAct                                                                       >  2:3058242/3‑100 (MQ=2)
                                  tgTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC...GC.TG.GCGCGCGC.CGCG.CCGGATCTTTGT.CTG..CGCG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAAct                                                                       >  1:1780662/2‑100 (MQ=9)
                                  ggTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA...A.CT.GACC...C.GGCA.ACGGCC.TATGCGCTGGACGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAActa                                                                      >  1:4124903/2‑99 (MQ=2)
                                  cGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT..GC.GT.GCGCG.CCATGAATTCATCG.AGCGC.CAT..CGAGCGGCGCTCCCCCCGCGGGGCCGTGGATCGaaa                                                                         >  2:1677022/1‑101 (MQ=2)
                                   gTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAT.GG.CTATGGCG.GC.AGTG.TCAGGT.T.TTC.CAG..CGGC.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAAccc                                                                      >  1:4469845/1‑99 (MQ=2)
                                   gTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA..GC.CT.GCGCG.GC.CGCA.TCGGCT.TCCGC.CTG..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGGTCGAAACATc                                                                     >  2:1004889/1‑101 (MQ=255)
                                   gTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA..GC.CT.GCGCG.GC.CGCA.TCGGCT.TCCGC.CTG..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATc                                                                     >  2:3718600/1‑101 (MQ=255)
                                   gTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA...A.CT.GACC...C.GGCA.ACGGCC.TATGCGCTGGACGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAActac                                                                     >  1:3824646/1‑98 (MQ=2)
                                   gTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC...GC.TG.GCGCGCGC.CGCG.CCGGATCTTTGT.CTG..CGCG.GTCGCTCCCCCCGCGGGGGCGTGGGTCGAAActc                                                                      >  1:1057255/1‑99 (MQ=9)
                                    tcccTCCCCCCGCGGGGGCGTGGATCGAGACC..GC.CC.GCGCG.GC.CGCA.TCGGCT.TCCGC.CTG..CGTG.GTCGCCCCCCCCGCGGGGGCGTGGATCGAAACATCa                                                                    <  1:2922142/98‑1 (MQ=25)
                                    tCGCTCCCCCCGCGGGGGCGTGGATCGAAACA...A.CT.GACC...C.GGCA.ACGGCC.TATGCGCTGGACGTG.GTCGCTCCCACCGCGGGGGCGTGGATCGAAActaca                                                                    >  1:4238981/1‑97 (MQ=2)
                                    tCGCTCCACCCGCGGGGTCGTGGGCCGAAACA..ACGCG.GCGCG.GG.CCTA.T.GGCTGTCGCC.CCC..CCCC.GTCGCTCCCCCCCCGGGGGCGTGGATCGAAActgc                                                                     <  2:710065/101‑4 (MQ=2)
                                     cGCTCCCCCCGCGGGGGCGTGGATCGAAACA..GC.CT.GCGCG.GC.CGCA.TCGGCT.TCCGC.CTG..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAg                                                                   >  2:2427233/1‑101 (MQ=255)
                                     cGCTCCCCCCGCGGGGGCGTGGATCGAAACA..GC.CT.GCGCG.GC.CGCA.TCGGCT.TCCGC.CTG..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAg                                                                   >  2:1351571/1‑101 (MQ=255)
                                      gCTCCCCCCGCGGGGGCGTGGATCGAAACT..GC.GT.GCGCG.CCATGAATTCATCG.AGCGC.CAT..CGAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACacc                                                                     <  2:3463952/101‑3 (MQ=2)
                                      gCTCCCCCCGCGGGGGCGTGGATCGAAACT..GC.GT.GCGCG.CCATGAATTCATCG.AGCGC.CAT..CGAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACacc                                                                     >  1:4938516/1‑99 (MQ=2)
                                      gCTCCCCCCGCGGGGGCGTGGATCGAAACA...A.CT.GACC...C.GGCA.ACGGCC.TATGCGCTGGACGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAActacacc                                                                  <  1:2155961/101‑7 (MQ=2)
                                      gCTCCCCCCGCGGGGGCGTGGATCGAAACA...A.CT.GACC...C.GGCA.ACGGCC.TATGCGCTGGACGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAActacacc                                                                  <  2:1447142/101‑7 (MQ=2)
                                      gCTCCCCCCGCGGGGGCGTGGATCGAAAC...GC.TG.GCGCGCGC.CGCG.CCGGATCTTTGT.CTG..CGCG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAActcggc                                                                   >  1:1927665/1‑96 (MQ=9)
                                      ccTCCCCCCGCGGGGGCGTGGATCGAAACT..GC.GT.GCGCG.CCATGAATTCATCG.AGCGC.CAT..CGAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACacc                                                                     <  2:3235949/100‑3 (MQ=2)
                                      ccTCCCCCCGCGGGGGCGGGGATCGAAACA..GC.CT.GCGCG.GC.CGCA.TCGGCT.TCCGC.CTG..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCacc                                                                  <  2:4909765/100‑3 (MQ=255)
                                       ccccccccGCGGGGGCGTGGGTCCAAACATTGC.TT.TGGCG.GC.AGTG.TCAGGT.T.TTC.CAG..CGGC.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAAcccgcca                                                                  <  2:2766090/99‑7 (MQ=2)
                                       cacccccgGCGGGGGCGTGGATCGAAACA..GC.CT.GCGCG.GC.CGCA.TCGGCT.TCCGC.CTG..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCt                                                                 <  1:4995760/99‑1 (MQ=255)
                                       cTCCCCCCGCGGGGGCGTGGATCGAAACT..GC.GT.GCGCG.CCATGAATTCATCG.AGCGC.CAT..CGAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCa                                                                    <  1:4542812/101‑1 (MQ=2)
                                       cTCCCCCCGCGGGGGCGTGGATCGAAACA..GC.CT.GCGCG.GC.CGCA.TCGGCT.TCCGC.CTG..CGTG.GTCGCTCCCTCCGCGGGGGCGTGGATCGAAACATCAGCt                                                                 <  2:468931/101‑1 (MQ=255)
                                       cTCCCCCCGCGGGGGCGTGGATCGAAACA..GC.CT.GCGCG.GC.CGCA.TCGGCT.TCCGC.CTG..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCATCt                                                                 >  2:1133706/1‑101 (MQ=255)
                                        tCCCCCCGCGGGGGCGTGGATCGAAACAT.GG.CTATGGCG.GC.AGTG.TCAGGT.T.TTC.CAG..CGGC.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAAcccgccac                                                                 >  1:483853/1‑94 (MQ=2)
                                        tCCCCCCGCGGGGGCGTGGATCGAAAC...GC.TG.GCGCGCGC.CGCG.CCGGATCTTTGT.CTG..CGCG.GTCGCTCCCCCCGCGGGGGGGTGGATCGAAActcggcct                                                                 >  1:4080572/1‑94 (MQ=9)
                                         ccccccGCGGGGGCGTGGATCGAAACT..GC.GT.GCGCG.CCATGAATTCATCG.AGCGC.CAT..CGAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCaat                                                                  <  1:2645404/101‑3 (MQ=2)
                                         ccccccGCGGGGGCGTGGATCGAAACAT.GG.CTATGGCG.GC.AGTG.TCAGGT.T.TTC.CAG..CGGC.GTCGCTCCCCCCGCGGGGGCGGGGATCGAAAccccccacc                                                                >  2:1299302/1‑93 (MQ=2)
                                         ccccccGCGGGGGCGTGGATCGAAACA...A.CT.GACC...C.GGCA.ACGGCC.TATGCGCTGGACGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAActacaccggg                                                               >  2:2969986/1‑92 (MQ=2)
                                           ccccGCGGGGGCGTGGATCGAAACAT.GG.CTATGGCG.GC.AGTG.TCAGGT.T.TTC.CAG..CGGC.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAAcccgccacgtc                                                              >  1:1657973/1‑91 (MQ=2)
                                           ccccGCGGGGGCGTGGATCGAAAC...GC.TG.GCGCGCGC.CGCG.CCGGATCTTTGT.CTG..CGCG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAActcggcctcga                                                              <  1:3534010/101‑11 (MQ=2)
                                             ccGGGGGGGCGTGGATCGAAACA..GC.CT.GCGCG.GC.CGCA.TCGGCT.TCCGC.CTG..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTcg.tcgt                                                          <  1:682592/101‑1 (MQ=255)
                                             ccGCGGGGGCGTGGATCGAAACT..GC.GT.GCGCG.CCATGAATTCATCG.AGCGC.CAT..CGAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCaatgccg                                                              <  1:2469531/101‑7 (MQ=0)
                                                 gggggCGTGGATCGAAACA..GC.CT.GCGCG.GC.CGCA.TCGGCT.TCCGC.CTG..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCG.TCGTTGGt                                                      >  1:4004196/1‑101 (MQ=255)
                                                    ggCGTGGATCGAAACA..GC.CT.GCGCG.GC.CGCA.TCGGCT.TCCGC.CTG..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCG.TCGTTGGTCAg                                                   <  2:1098654/101‑1 (MQ=255)
                                                     gCGTGGATCGAAACA..GC.CT.GCGCG.GC.CGCA.TCGGCT.TCCGC.CTG..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCG.TCGTTGGTCAGc                                                  >  2:779099/1‑101 (MQ=255)
                                                         ggATCGAAACA..GC.CT.GCGCG.GC.CGCA.TCGGCT.TCCGC.CTG..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCG.TCGTTGGTCAGCCGGa                                              >  2:1399203/1‑101 (MQ=255)
                                                           aTCGAAACA..GC.CT.GCGCG.GC.CGCA.TCGGCT.TCCGC.CTG..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCG.TCGTTGGTCAGCCGGAC.g                                           >  1:2718795/1‑101 (MQ=255)
                                                           aTCGAAACA..GC.CT.GCGCG.GC.CGCA.TCGGCT.TCCGC.CTG..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCG.TCGTTGGTCAGCCGGAC.g                                           >  2:2654078/1‑101 (MQ=255)
                                                             cGAAACA..GC.CT.GCGCG.GC.CGCA.TCGGCT.TCCGC.CTG..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCG.TCGTTGGTCAGCCGGAC.GAt                                         >  2:4433771/1‑101 (MQ=255)
                                                              gAAACA..GC.CT.GCGCG.GC.CGCA.TCGGCT.TCCGC.CTG..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCG.TCGTTGGTCAGCCGGAC.GATg                                        <  1:771636/101‑1 (MQ=255)
                                                              gAAACA..GC.CT.GCGCG.GC.CGCA.TCGGCT.TCCGC.CTG..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATAGAAACATCAGCTCG.TCGTTGGTCAGCCGGAC.GATg                                        >  2:2834017/1‑101 (MQ=255)
                                                               aaaCA..GC.CT.GCGCG.GC.CGCA.TCGGCT.TCCGC.CTG..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCG.TCGTTGGTCAGCCGGAC.GATGt                                       >  2:4302216/1‑101 (MQ=255)
                                                                aaCA..GC.CT.GCGCG.GC.CGCA.TCGGCT.TCCGC.CTG..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCG.TCGTTGGTCAGCCGGAC.GATGTc                                      >  1:3387275/1‑101 (MQ=255)
                                                                 aCA..GC.CT.GCGCG.GC.CGCA.TCGGCT.TCCGC.CTG..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCG.TCGTTGGTCAGCCGGAC.GATGTcc                                     <  2:196544/101‑1 (MQ=255)
                                                                 aCA..GC.CT.GCGCG.GC.CGCA.TCGGCT.TCCGC.CTG..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCG.TCGTTGGTCAGCCGGAC.GATGTcc                                     <  1:1439366/101‑1 (MQ=255)
                                                                 aCA..GC.CT.GCGCG.GC.CGCA.TCGGCT.TCCGC.CTG..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCG.TCGTTGGTCAGCCGGAC.GATGTcc                                     >  1:377430/1‑101 (MQ=255)
                                                                   a..GC.CT.GCGCG.GC.CGCA.TCGGCT.TCCGC.CTG..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCG.TCGTTGGTCAGCCGGAC.GATGTCCGt                                   >  1:2400336/1‑101 (MQ=255)
                                                                              gcg.GC.CGCA.TCGGCT.TCCGC.CTG..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCG.TCGTTGGTCAGCCGGAC.GATGTCCGTCGCTccc                            >  2:3328568/1‑101 (MQ=255)
                                                                                  gC.CGCA.TCGGCT.TCCGC.CTG..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCG.TCGTTGGTCAGCCGGAC.GATGTCCGTCGCTcccccc                         <  1:2897020/101‑1 (MQ=255)
                                                                                        a.TCGGCT.TCCGC.CTG..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCG.TCGTTGGTCAGCCGGAC.GATGTCCGTCGCTCCCCCCGCggg                    >  2:56684/1‑101 (MQ=255)
                                                                                          tCGGCT.TCCGC.CTG..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCG.TCGTTGGTCAGCCGGAC.GATGTCCGTCGCTCCCCCCGCgggg                   <  2:1894191/101‑1 (MQ=255)
                                                                                              cT.TCCGC.CTG..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCG.TCGTTGGTCAGCCGGAC.GATGTCCGTCGCTCCCCCCGCGGGGGCGt               <  1:428246/101‑1 (MQ=255)
                                                                                               t.tCCGC.CTG..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCG.TCGTTGGTCAGCCTGAC.GATGTCCGTCGCTCCCGCCGCGGGGGCGTg              >  1:4344578/1‑101 (MQ=255)
                                                                                                     ggatcccgccg.gTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTTGACCGCATCGAAGCTGGTCACATCGCCGTCGCTCCCCCCGCGGGGGCGTg              >  1:1203558/11‑101 (MQ=2)
                                                                                                     ggaccccgccg.gTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTTGACCGCATCGAAGCTGGTCACATCGCCGTCGCTCCCCCCGCGGGGGCGTg              <  1:3911055/91‑1 (MQ=2)
                                                                                                     c.cTG..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCG.TCGTTGGTCAGCCGGAC.GATGTCCGTCGCTCCCCCCGCGGGGGCGTGGATCg         <  1:1847270/101‑1 (MQ=255)
                                                                                                     c.cTG..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCG.TCGTTGGTCAGCCGGAC.GATGTCCGTCGCTCCCCCCGCGGGGGCGTGGATCg         <  1:2251628/101‑1 (MQ=255)
                                                                                                      gatcccgccg.gTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTTGACCGCATCGAAGCTGGTCACATCGCCGTCGCTCCCCCCGCGGGGGCGTgg             >  2:3147751/10‑101 (MQ=2)
                                                                                                       cTG..CGTG.GTCGCCCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCG.TCGTTGGTCAGCCGGAC.GATGTCCGTCGCTCCCCCCGCGGGGGCGTGGATCGa        <  2:15354/101‑1 (MQ=255)
                                                                                                       atcccgccg.gTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTTGACCGCATCGAAGCTGGTCACATCGCCGTCGCTCCCCCCGCGGGGGCGTGGa            >  2:2007230/9‑101 (MQ=2)
                                                                                                         cccgccg.gTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTTGACCGCATCGAAGCTGGTCACATCGCCGTCGCTCCCCCCGCGGGGGCGTGGATc          <  2:376301/95‑1 (MQ=2)
                                                                                                           ccccg.gTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTTGACCGCATCGAAGCTGGTCACATCGCCGTCGCTCCCCCCGCGGGGGCGTGGATCGa        <  1:3725285/97‑1 (MQ=2)
                                                                                                               g.gTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTTGACCGCATCGAAGCTGGTCACATCGCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAcg    <  2:4381454/101‑2 (MQ=2)
                                                                                                               |                                                                                                       
CGGTCCAGAGATAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA..GC.CT.GCGCG.GC.CGCA.TCGGCT.TCCGC.CTG..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCG.TCGTTGGTCAGCCGGAC.GATGTCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGC  >  NC_014034/1396868‑1397068

Base quality scores:  ATCG  < 3 ≤  ATCG  < 16 ≤  ATCG  < 24 ≤  ATCG  < 33 ≤  ATCG  < 39 ≤  ATCG