BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	1396966 =	290 (1.770)	98 (0.600)	44/134	5.1	0.33	coding (848/1578 nt)	RCAP_rcc01307	hypothetical protein
*	?	NC_014034	= 1397797	108 (0.440)	98 (0.600)	44/134	5.1	0.33	intergenic (+101/+1797)	RCAP_rcc01307/RCAP_rcc01309	hypothetical protein/IS66 family transposase
Rejected: Position hash score below cutoff.

Only 100 of 431 total aligned reads displayed.


ACCGGTCCAGAGATAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.A..GC.CT.GCGCG.G..C.CGC.A.TCGGCT.TC.CGC.CTG..CG.TG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCGTCGTTGGTCAGCCGGACGATGTCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT  >  NC_014034/1396866‑1397066


  cGGTCCAGAGATAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.A..GC.CT.GCGCG.G..C.CGC.A.TCGGCT.TC.CGC.CTG..CG.Tg                                                                                                     <  2:3053645/101‑1 (MQ=255)


   ggTCCAGAGATAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.A..GC.CT.GCGCG.G..C.CGC.A.TCGGCT.TC.CGC.CCG..CG.Tg.g                                                                                                   >  2:1399264/1‑101 (MQ=255)


            aTAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.A..GC.CT.GCGCG.G..C.CGC.A.TCGGCT.TC.CGC.CTC..CG.TG.GGCGCTcccc                                                                                          >  2:1226999/1‑101 (MQ=255)


              aGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.A..GC.CT.GCGCG.G..C.CGC.A.TCGGCT.TC.CGC.CTG..CG.TG.GTCGCTcccccc                                                                                        >  2:3407247/1‑101 (MQ=255)


              aGACCGCGCGGACCTCCTCACACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.A..GC.CT.GCGCG.G..C.CGC.A.TCGGCT.TC.CGC.CTG..CG.TG.GTCGCTcccccc                                                                                        <  1:879192/101‑1 (MQ=255)


                 ccGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.A..GC.CT.GCGCG.G..C.CGC.A.TCGGCT.TC.CGC.CTG..CG.TG.GTCGCTCCCCCcgcg                                                                                     >  2:4995430/1‑101 (MQ=255)


                        gACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.A..GC.CT.GCGCG.G..C.CGC.A.TCGGCT.TC.CGC.CTG..CG.TG.GTCGCTCCCCCCGCGGGGGCGt                                                                              <  2:2958992/101‑1 (MQ=255)


                           tcgcggttgcGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.AT.GG.CTATGGCG.G..C.AGT.G.TCAGGT.T..TTC.CAG..CG.GC.GTCGCTCCCCCCGCGGGGGCGTgg                                                                            <  2:1455824/92‑1 (MQ=0)


                           ggtcaacactgTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC....GC.TG.GCGCGCG..C.CGC.G.CCGGATCTT.TGT.CTG..CG.CG.GTCGCTCCCCCCGCGGGGGCGTgg                                                                            >  1:4002526/11‑101 (MQ=9)


                           ggtcaacactgTCGCCCCCCCCGCGGGGGCGTGGATCGAAAC....GC.TG.GCGCGCG..C.CGC.G.CCGGATCTT.TGT.CTG..CG.CG.GTCGCTCCCCCCGCGGGGGCGTgg                                                                            <  2:3587270/91‑1 (MQ=9)


                            tcctcAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.A..GC.CT.GCGCG.G..C.CGC.A.TCGGCT.TC.CGC.CTG..CG.TG.GTCGCTCCCCCCGCGGGGGCGGGGAt                                                                          >  1:1894328/1‑101 (MQ=255)


                             tggccccgggcGCTCCCCCCGCGGGGGCGTGGATCGAAAC.A...A.CT.GACC.....C.GGC.A.ACGGCC.TA.TGCGCTGGACG.TG.GTCGCTCCCCCCGCGGGGGCGTGGATc                                                                         <  1:29207/91‑1 (MQ=2)


                             tggccccggTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.A...A.CT.GACC.....C.GGC.A.ACGGCC.TA.TGCGCTGGACG.TG.GTCGCTCCCCCCGCGGGGGCGTGGATc                                                                         >  1:1945509/9‑101 (MQ=2)


                             tggccccggTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.A...A.CT.GACC.....C.GGC.A.ACGGCC.TA.TGCGCTGGACG.TG.GTCGCTCCCCCCGCGGGGGCGTGGATc                                                                         >  1:1501469/9‑101 (MQ=2)


                             cctcgcaCGTCGGCCCCCCCGCCGGGGCGTGGATGGAAGCAA..TG.CG.GCGCG.G..G.CCC.A.T.GGCT.GC.CGG.ACC..CGCCC.GTCGCTCCCCCCGCGGGGGCGTGGAt                                                                          <  2:4801567/95‑1 (MQ=0)


                             cctcAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.A..GC.CT.GCGCG.G..C.CGC.A.TCGGCT.TC.CGC.CTG..CG.TG.GTCGCTCCCCCCGCGGGGGCGTGGATc                                                                         >  2:2606539/1‑101 (MQ=255)


                             cctcAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.A..GC.CT.GCGCG.G..C.CGC.A.TCGGCT.TC.CGC.CTG..CG.TG.GTCGCTCCCCCCGCGGGGGCGTGGATc                                                                         <  1:579960/101‑1 (MQ=255)


                             cctcAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.A..GC.CT.GCGCG.G..C.CGC.A.TCGGCT.TC.CGC.CTG..CG.TG.GTCGCCCCCCCCGCGGGGGCGTGGATc                                                                         <  1:2874552/101‑1 (MQ=255)


                              cccgcccGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.T..GC.GT.GCGCG.C..CATGA.ATTCATCG.AG.CGC.CAT..CG.AGCGTCGCTCCCCCCGCGGGGGCGTGGa                                                                           <  1:719953/95‑1 (MQ=2)


                              caacactgTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC....GC.TG.GCGCGCG..C.CGC.G.CCGGATCTT.TGT.CTG..CG.CG.GTCGCTCCCCCCGCGGGGGCGTGGATc                                                                         <  2:951001/94‑1 (MQ=9)


                               tcAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.A..GC.CT.GCGCG.G..C.CGC.A.TCGGCT.TC.CGC.CTG..CG.TG.GTCGCTCCCCCCGCGGGGGCGTGGATCGa                                                                       <  2:1290338/101‑1 (MQ=255)


                               ggttgcGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.AT.GG.CTATGGCG.G..C.AGT.G.TCAGGT.T..TTC.CAG..CG.GC.GTCGCTCCCCCCGCGGGGGCGTGGATCg                                                                        >  1:2327536/6‑101 (MQ=2)


                               gccccggTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.A...A.CT.GACC.....C.GGC.A.ACGGCC.TA.TGCGCTGGACG.TG.GTCGCTCCCCCCGCGGGGGCGTGGATCGa                                                                       >  2:3991955/7‑101 (MQ=2)


                                cAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.A..GC.CT.GCGCG.G..C.CGC.A.TCGGCT.TC.CGC.CTG..CG.TG.GTCGCTCCCCCCGCGGGGGCGGGGATCGaa                                                                      >  1:635910/1‑101 (MQ=255)


                                acactgTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC....GC.TG.GCGCGCG..C.CGC.G.CCGGATCTT.TGT.CTG..CG.CG.GTCGCTCCCCCCGCGGGGGCGTGGATCGa                                                                       >  1:1521890/6‑101 (MQ=9)


                                 gccggTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.T..GC.GT.GCGCG.C..CATGA.ATTCATCG.AG.CGC.CAT..CG.AGCGTCGCTCCCCCCGCGGGGGCGTGGATCg                                                                        >  2:4277650/5‑101 (MQ=2)


                                 gcccGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.T..GC.GT.GCGCG.C..CATGA.ATTCATCG.AG.CGC.CAT..CG.AGCGTCGCTCCCCCCGCGGGGGCGTGGATCg                                                                        >  2:4175570/4‑101 (MQ=2)


                                 aggccccGCCCCCCCCGCGGGGGCGTGGATCGAAAC.A..GC.CT.GCGCG.G..C.CGC.A.TCGGCT.TC.CGC.CTG..CG.TG.GTCGCTCCCCCCGCGGGGGCGTGGATCGaaa                                                                     <  1:2260256/95‑1 (MQ=255)


                                 aGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.A..GC.CT.GCGCG.G..C.CGC.A.TCGGCT.TC.CGC.CTG..CG.TG.GTCGCTCCCCCCGCGGGGGCGGGGATCGaaa                                                                     >  1:429884/1‑101 (MQ=255)


                                  tgcGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.AT.GG.CTATGGCG.G..C.AGT.G.TCAGGT.T..TTC.CAG..CG.GC.GTCGCTCCCCCCGCGGGGGCGTGGATCGaaa                                                                     <  1:180527/99‑1 (MQ=2)


                                  gACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.A..GC.CT.GCGCG.G..C.CGC.A.TCGGCT.TC.CGC.CTG..CG.TG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAAc                                                                    <  1:3771865/101‑1 (MQ=255)


                                  cccGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.T..GC.GT.GCGCG.C..CATGA.ATTCATCG.AG.CGC.CAT..CG.AGCGTCGCTCCCCCCGCGGGGGCGTGGATCGa                                                                       <  1:4788053/99‑1 (MQ=2)


                                   ctgTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC....GC.TG.GCGCGCG..C.CGC.G.CCGGATCTT.TGT.CTG..CG.CG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAAc                                                                    <  2:230965/99‑1 (MQ=9)


                                    ggTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.A...A.CT.GACC.....C.GGC.A.ACGGCC.TA.TGCGCTGGACG.TG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAActa                                                                  >  2:4049441/2‑99 (MQ=2)


                                    ggTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.A...A.CT.GACC.....C.GGC.A.ACGGCC.TA.TGCGCTGGACG.TG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAActa                                                                  <  1:2001456/100‑3 (MQ=2)


                                    ggTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.A...A.CT.GACC.....C.GGC.A.ACGGCC.TA.TGCGCTGGACG.TG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAActa                                                                  <  1:2707310/100‑3 (MQ=2)


                                     gTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.T..GC.GT.GCGCG.C..CATGA.ATTCATCG.AG.CGC.CAT..CG.AGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAc                                                                    >  1:412049/1‑101 (MQ=2)


                                     gTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.T..GC.GT.GCGCG.C..CATGA.ATTCATCG.AG.CGC.CAT..CG.AGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAc                                                                    >  1:440269/1‑101 (MQ=2)


                                     gTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC....GC.TG.GCGCGCG..C.CGC.G.CCGGATCTT.TGT.CTG..CG.CG.GTCGCTCCCCCCGCGGGGGCGTGGGTCGAAActc                                                                  >  1:1057255/1‑99 (MQ=9)


                                     gTCGCCCCCCCCGCGGGGGCGTGGATCGAAAC.A..CC.CT.GCGCC.G..C.AGC.G.AGTGCG.TCTGGA.ACA..GG.AT.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAActa                                                                  <  2:4434227/101‑3 (MQ=2)


                                      tCGCTCCACCCGCGGGGTCGTGGGCCGAAAC.A..ACGCG.GCGCG.G..G.CCT.A.T.GGCTGTC.GCC.CCC..CC.CC.GTCGCTCCCCCCCCGGGGGCGTGGATCGAAActgc                                                                 <  2:710065/101‑4 (MQ=2)


                                      gcGCCCCCCCCGCGGGGGCGTGGATCGAAAC.A..GC.CT.GCGCG.G..C.CGC.A.TCGGCT.TC.CGC.CTG..CG.TG.GTCGCTCCCCCCGCGGGGGCGTTGATCGAAACATCa                                                                <  2:2129897/100‑1 (MQ=255)


                                       cGCTCCCCCCGCGGGGGCGTGGATCGAAAC.T..GC.GT.GCGCG.C..CATGA.ATTCATCG.AG.CGC.CAT..CG.AGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACac                                                                  <  2:1704308/101‑2 (MQ=2)


                                       cGCTCCCCCCGCGGGGGCGTGGATCGAAAC.T..GC.GT.GCGCG.C..CATGA.ATTCATCG.AG.CGC.CAT..CG.AGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACac                                                                  >  1:1221739/1‑100 (MQ=2)


                                       cGCTCCCCCCGCGGGGGCGTGGATCGAAAC....GC.TG.GCGCGCG..C.CGC.G.CCGGATCTT.TGT.CTG..CG.CG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAActcgg                                                                >  1:2176174/1‑97 (MQ=9)


                                       cGCCCCCCCCGCGGGGGCGTGGATCGAAAC.T..TG.AT.GCCCA.GATC.CGCAA.TCGGC...C.GGG.CTC..GA.TC.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAAcctat                                                                <  2:2876833/101‑5 (MQ=0)


                                        gCTCCCCCCGCGGGGGCGTGGATTGAAAC.A..GC.CT.GCGCG.G..C.CGC.A.TCGGCT.TC.CGC.CTG..CG.TG.GTCGATCCCCCCGCGGGGGGGTGGTTCGAAACATAAGc                                                              >  1:4064415/1‑101 (MQ=37)


                                        gCTCCCCCCGCGGGGGCGTGGATCGAAAC.AT.GG.CTATGGCG.G..C.AGT.G.TCAGGT.T..TTC.CAG..CG.GC.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAAcccgcc                                                               <  1:3386612/101‑6 (MQ=2)


                                        gCTCCCCCCGCGGGGGCGTGGATCGAAAC.A..GC.CT.GCGCG.G..C.CGC.A.TCGGCT.TC.CGC.CTG..CG.TG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGc                                                              >  1:3242347/1‑101 (MQ=255)


                                        gCTCCCCCCGCGGGGGCGTGGATCGAAAC....GC.TG.GCGCGCG..C.CGC.G.CCGGATCTT.TGT.CTG..CG.CG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAActcggc                                                               >  1:4218476/1‑96 (MQ=9)


                                        ccTCCCCCCGCGGGGGCGTGGATCGAAAC.T..GC.GT.GCGCG.C..CATGA.ATTCATCG.AG.CGC.CAT..CG.AGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACacc                                                                 <  2:3235949/100‑3 (MQ=2)


                                         ccccccccGCGGGGGCGTGGGTCCAAAC.ATTGC.TT.TGGCG.G..C.AGT.G.TCAGGT.T..TTC.CAG..CG.GC.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAAcccgcca                                                              <  2:2766090/99‑7 (MQ=2)


                                         cTCCCCCCGCGGGGGCGTGGATCGAAAC.T..GC.GT.GCGCG.C..CATGA.ATTCATCG.AG.CGC.CAT..CG.AGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCa                                                                <  1:3411648/101‑1 (MQ=2)


                                         cTCCCCCCGCGGGGGCGTGGATCGAAAC.A..GC.CT.GCGCG.G..C.CGC.A.TCGGCT.TC.CGC.CTG..CG.TG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCATCt                                                             >  2:1133706/1‑101 (MQ=255)


                                          tCCCCCCGCGGGGGCGTGGATCGAAAC.T..GC.GT.GCGCG.C..CATGA.ATTCATCG.AG.CGC.CAT..CG.AGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCaa                                                               <  1:2944103/101‑2 (MQ=2)


                                          tCCCCCCGCGGGGGCGTGGATCGAAAC....GC.TG.GCGCGCG..C.CGC.G.CCGGATCTT.TGT.CTG..CG.CG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAActcggcct                                                             <  2:4739187/101‑8 (MQ=9)


                                          cccccccGCGGGGGCGTGGATCGAAAC.T..GC.GT.GCGCG.C..CATGA.ATTCATCG.AG.CGC.CAT..CG.AGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCaa                                                               <  1:223403/100‑2 (MQ=2)


                                          cccccccGCGGGGGCGTGGATCGAAAC....GC.TG.GCGCGCG..C.CGC.G.CCGGATCTT.TGT.CTG..CG.CG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAActcggcct                                                             <  1:4517929/100‑8 (MQ=9)


                                           ccccccGCGGGGGCGTGGATCGAAAC.A..GC.CT.GCGCG.G..C.CGC.A.TCGGCT.TC.CGC.CTG..CG.TG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCtcg                                                           <  1:2642444/101‑1 (MQ=255)


                                           ccccccGCGGGGGCGTGGATCGAAAC....GC.TG.GCGCGCG..C.CGC.G.CCGGATCTT.TGT.CTG..CG.CG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAActcggcctc                                                            >  1:2809388/1‑93 (MQ=9)


                                            cccccGCGGGGGCGTGGATCGAAAC.A..GC.CT.GCGCG.G..C.CGC.A.TCGGCT.TC.CGC.CTG..CG.TG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCtcgt                                                          <  1:3876262/101‑1 (MQ=255)


                                            cccccGCGGGGGCGTGGATCGAAAC....GC.TG.GCGCGCG..C.CGC.G.CCGGATCTT.TGT.CTG..CG.CG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAActcggcctcg                                                           <  2:4921676/101‑10 (MQ=9)


                                            cccccGCGGGGGCGTGGATCGAAAC....GC.TG.GCGCGCG..C.CGC.G.CCGGATCTT.TGT.CTG..CG.CG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAActcggcctcg                                                           <  1:1301550/101‑10 (MQ=9)


                                            cccccGCGGGGGCGTGGATCGAAAC....GC.TG.GCGCGCG..C.CGC.G.CCGGATCTT.TGT.CTG..CG.CG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAActcggcctcg                                                           <  2:1579696/101‑10 (MQ=9)


                                               ccGCGGGGGCGTGGATCGAAAC.T..GC.GT.GCGCG.C..CATGA.ATTCATCG.AG.CGC.CAT..CG.AGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCaatgccg                                                          <  1:2469531/101‑7 (MQ=0)


                                               ccGCGGGGGCGTGGATCGAAAC.A..GC.CT.GCGCG.G..C.CGC.A.TCGGCT.TC.CGC.CTG..CG.TG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTcgtcgt                                                       >  2:1004960/1‑101 (MQ=255)


                                                cgcgGGGGCGTGGATCGAAAC.T..GC.GT.GCGCG.C..CATGA.ATTCATCG.AG.CGC.CAT..CG.AGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCaatgccga                                                         <  2:3670359/101‑8 (MQ=0)


                                                cgcgGGGGCGTGGATCGAAAC.A..GC.CT.GCGCG.G..C.CGC.A.TCGGCT.TC.CGC.CTG..CG.TG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCGTCGtt                                                      <  1:950904/101‑1 (MQ=255)


                                                cgcgGGGGCGTGGATCGAAAC.A..GC.CT.GCGCG.G..C.CGC.A.TCGGCT.TC.CGC.CTG..CG.TG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCGTCGtt                                                      <  1:210884/101‑1 (MQ=255)


                                                  cgGGGGCGTGGATCGAAAC.A..GC.CT.GCGCG.G..C.CGC.A.TCGGCT.TC.CGC.CTG..CG.GG.GTCGCTCCCCCCGCGGGGGCGTGGATCGGAACATCAGCTCGTCGTTgg                                                    >  1:3792349/1‑101 (MQ=255)


                                                   gggggCGTGGATCGAAAC.A..GC.CT.GCGCG.G..C.CGC.A.TCGGCT.TC.CGC.CTG..CG.TG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCGTCGTTGGt                                                   <  2:4675463/101‑1 (MQ=255)


                                                    ggggCGTGGATCGAAAC.A..GC.CT.GCGCG.G..C.CGC.A.TCGGCT.TC.CGC.CTG..CG.TG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGTCAGCTCGTCGTTGGTc                                                  >  2:4542878/1‑101 (MQ=255)


                                                      ggCGTGGATCGAAAC.A..GC.CT.GCGCG.G..C.CGC.A.TCGGCT.TC.CGC.CTG..CG.TG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCGTCGTTGGTCAg                                                <  2:1098654/101‑1 (MQ=255)


                                                       gCGTGGATCGAAAC.A..GC.CT.GCGCG.G..C.CGC.A.TCGGCT.TC.CGC.CTG..CG.TG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCGTCGTTGGTCAGc                                               >  2:779099/1‑101 (MQ=255)


                                                         gTGGATCGAAAC.A..GC.CT.GCGCG.G..C.CGC.A.TCGGCT.TC.CGC.CTG..CG.TG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCGTCGTTGGTCAGCCg                                             <  1:3623409/101‑1 (MQ=255)


                                                         gTGGATCGAAAC.A..GC.CT.GCGCG.G..C.CGC.A.TCGGCT.TC.CGC.CTG..CG.TG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCCTCGGTGGGCAGCCg                                             >  2:4335797/1‑101 (MQ=255)


                                                          tGGATCGAAAC.A..GC.CT.GCGCG.G..C.CGC.A.TCGGCT.TC.CGC.CTG..CG.TG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCGTCGTTGGTCAGCCgg                                            <  2:3311936/101‑1 (MQ=255)


                                                           ggATCGAAAC.A..GC.CT.GCGCG.G..C.CGC.A.TCGGCT.TC.CGC.CTG..CG.TG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCGTCGTTGGTCAGCCGGa                                           <  2:3755266/101‑1 (MQ=255)


                                                             aTCGAAAC.A..GC.CT.GCGCG.G..C.CGC.A.TCGGCT.TC.CGC.CTG..CG.TG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCGTCGTTGGTCAGCCGGACg                                         >  2:2654078/1‑101 (MQ=255)


                                                                gAAAC.A..GC.CT.GCGCG.G..C.CGC.A.TCGGCT.TC.CGC.CTG..CG.TG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCGTCGTTGGTCAGCCGGACGATg                                      >  1:309201/1‑101 (MQ=255)


                                                                 aaaC.A..GC.CT.GCGCG.G..C.CGC.A.TCGGCT.TC.CGC.CTG..CG.TG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCGTCGTTGGTCAGCCGGACGATGt                                     >  1:1359769/1‑101 (MQ=255)


                                                                 aaaC.A..GC.CT.GCGCG.G..C.CGC.A.TCGGCT.TC.CGC.CTG..CG.TG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCGTCGTTGGTCAGCCGGACGATGt                                     >  1:4963719/1‑101 (MQ=255)


                                                                  aaC.A..GC.CT.GGGCG.G..C.CTC.A.TCGGCT.TC.CGC.CTG..CG.TG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCGTCGTTGGTCAGCCGGACGATGTc                                    <  1:1468078/101‑1 (MQ=255)


                                                                  aaC.A..GC.CT.GCGCG.G..C.CGC.A.TCGGCT.TC.CGC.CTG..CG.TG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCGTCGTTGGTCAGCCGGACGATGTc                                    <  1:1694266/101‑1 (MQ=255)


                                                                   aC.A..GC.CT.GCGCG.G..C.CGC.A.TCGGCT.TC.CGC.CTG..CG.TG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCGTCGTTGGTCAGCCGGACGATGTcc                                   >  2:1913806/1‑101 (MQ=255)


                                                                    c.A..GC.CT.GCGCG.G..C.CGC.A.TCGGCT.TC.CGC.CTG..CG.TG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCGTCGTTGGTCAGCCGGACGATGTCCg                                  >  1:4876284/1‑101 (MQ=255)


                                                                      a..GC.CT.GCGCG.G..C.CGC.A.TCGGCT.TC.CGC.CTG..CG.TG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCGTCGTTGGTCAGCCGGACGATGTCCGt                                 >  1:2400336/1‑101 (MQ=255)


                                                                         gC.CT.GCGCG.G..C.CGC.A.TCGGCT.TC.CGC.CTG..CG.TG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCGTCGTTGGTCAGCCGGACGATGTCCGTc                                <  2:2825696/101‑1 (MQ=255)


                                                                          c.cT.GCGCG.G..C.CGC.A.TCGGCT.TC.CGC.CTG..CG.TG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCGTCGTTGGTCAGCCGGACGATGTCCGTcc                               >  2:2398575/1‑100 (MQ=255)


                                                                               gcgcG.G..C.CGC.A.TCGGCT.TC.CGC.CTG..CG.TG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCGTCGTTGGTCAGCCGGACGATGTCCGTCGCTc                            >  2:1358561/1‑101 (MQ=255)


                                                                                cgcg.G..C.CGC.A.TCGGCT.TC.CGC.CTG..CG.TG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCGTCGTTGGTCAGCCGGACGATGTCCGTCGCTcc                           >  1:3527274/1‑101 (MQ=255)


                                                                                     g..C.CGC.A.TCGGCT.TC.CGC.CTG..CG.TG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCGTCGTTGGTCAGCCGGACGATGTCCGTCGCTcccccc                       <  2:1818639/101‑1 (MQ=255)


                                                                                        c.cGC.A.TCGGCT.TC.CGC.CTG..CG.TG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCGTCGTTGGTCAGCCGGACGATGTCCGTCGCTCCCCCcg                      <  2:309148/101‑1 (MQ=255)


                                                                                          cGC.A.TCGGCT.TC.CGC.CTG..CG.TG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCGTCGTTGGTCAGCCGGACGATGTCCGTCGCTCCCCCcgc                     <  1:4440504/101‑1 (MQ=255)


                                                                                              a.TCGGCT.TC.CGC.CTG..CG.TG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCGTCGTTGGTCAGCCGGACGATGTCCGTCGCTCCCCCCGCggg                  >  2:56684/1‑101 (MQ=255)


                                                                                                 cGGCT.TC.CGC.CTG..CG.TG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCGTCGTTGGTCAGCCGGACGATGTCCGTCGCTCCCCCCGCggggg                >  1:4604600/1‑101 (MQ=255)


                                                                                                     t.tC.CGC.CTG..CG.TG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCGTCGTTGGTCAGCCGGACGATGTCCGTCGCTCCCCCCGCGGGGGCGTg            >  1:3681461/1‑101 (MQ=255)


                                                                                                       tC.CGC.CTG..CG.TG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCGTCGTTGGTCAGCCGGACGATGTCCGTCGCTCCCCCCGCGGGGGCGTgg           <  2:1969976/101‑1 (MQ=255)


                                                                                                           gC.CTG..CG.TG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCGTCGTTGGTCAGCCGGACGATGTCCGTCGCTCCCCCCGCGGGGGCGTGGATc        <  1:4256292/101‑1 (MQ=255)


                                                                                                            c.cTG..CG.TG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCGTCGTTGGTCAGCCGGACGATGTCCGTCGCTCCCCCCGCGGGGGCGTGGATCg       <  1:3211217/101‑1 (MQ=255)


ACCGGTCCAGAGATAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.A..GC.CT.GCGCG.G..C.CGC.A.TCGGCT.TC.CGC.CTG..CG.TG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCGTCGTTGGTCAGCCGGACGATGTCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT  >  NC_014034/1396866‑1397066

Base quality scores:


ATCG

< 3 ≤


ATCG

< 18 ≤


ATCG

< 25 ≤


ATCG

< 33 ≤


ATCG

< 39 ≤


ATCG