New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 1397499 =166 (1.040)94 (0.590) 43/130 5.0 0.41 coding (1381/1578 nt) RCAP_rcc01307 hypothetical protein
?NC_014034 = 1397797 108 (0.440)intergenic (+101/+1797) RCAP_rcc01307/RCAP_rcc01309 hypothetical protein/IS66 family transposase
Rejected: Position hash score below cutoff.

Only 100 of 286 total aligned reads displayed.

CTCTTCAATGGATATGGCAAAACCGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGC...CCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGG.CCCGCCTCAGCGCCGCGCT.GA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA  >  NC_014034/1397399‑1397599
                                                                                                          |                                                                                                       
   ttCAATGGATATGGCAAAACCGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGC...CCTGCACCACCGGTc                                                                                                      <  2:1676847/101‑1 (MQ=255)
    tCAATGGATATGGCAAAACCGTCCGCGACATGTGGCTCCCCCCGCGGAGGCGTGGATCGAAACACCG.TCCTC.ACCACGCAA.CCGC...CCTGCACCACCggcgc                                                                                                     >  2:2840883/1‑98 (MQ=38)
     cAATGGATATGGCAAAACCGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGC...CCTGCACCACCGGTCGc                                                                                                    >  1:3183436/1‑101 (MQ=255)
        tGGATATGGCAAAACCGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGC...CCTGCACCACCGGTCGCTcc                                                                                                 <  1:2370702/101‑1 (MQ=255)
        tGGATATGGCAAAACCGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGC...CCTGCACCACCGGTCGCTcc                                                                                                 >  2:2079403/1‑101 (MQ=255)
         ggATATGGCAAAACCGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAATACCG.TCATC.ACCCCCCAA.CCGC...CCTGCACCACCGGTCGCTccc                                                                                                >  1:3763221/1‑101 (MQ=255)
         ggATATGGCAAAACCGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGC...CCTGCACCACCGGTCGCTccc                                                                                                >  2:54314/1‑101 (MQ=255)
            tatGGCAAAACCGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGC...CCTGCACCACCGGTCGCTcccccc                                                                                             <  2:3850787/101‑1 (MQ=255)
            tatGGCAAAACCGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGC...CCTGCACCACCGGTCGCTcccccc                                                                                             <  1:2849634/101‑1 (MQ=255)
             atGGCAAACCCGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGC...CCTGCACCACCGGTCGCTCCCCCcg                                                                                            <  2:4002132/101‑1 (MQ=255)
             atGGCAAAACCGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGC...CCTGCACCACCGGTCGCTCCCCCcg                                                                                            >  1:2543661/1‑101 (MQ=255)
                 cAAAACCGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGC...CCTGCACCACCGGTCGCTCCCCCCGCggg                                                                                        >  1:664742/1‑101 (MQ=255)
                  aaaaCCGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGC...CCTGCACCACCGGTCGCTCCCCCCGCgggg                                                                                       >  1:3298553/1‑101 (MQ=255)
                         ccgataccgcgTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCGATGATCAAATCCGCAATCGGC...CGGGCTCGATC.GTCGCTCCCCCCGCGGGGGCGTg                                                                                  <  2:466566/91‑1 (MQ=0)
                          cgataccgcgTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCGATGATCAAATCCGCAATCGGC...CGGGCTCGATC.GTCGCTCCCCCCGCGGGGGCGTgg                                                                                 <  2:3940118/92‑1 (MQ=0)
                          ccGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGC...CCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGAt                                                                               <  1:2604658/101‑1 (MQ=255)
                          ccGCGACATGTCGCCCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCCCGCAA.CCGC...CCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGAt                                                                               <  2:194929/101‑1 (MQ=255)
                           cgcgACATGTCGCTCCCCCCGCGGGGGCGTGGAACGATACACCG.TCATC.ACCACGCAT.CCGC...CCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATc                                                                              <  1:4319148/101‑1 (MQ=255)
                            gcgACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGC...CCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCg                                                                             <  1:1448151/101‑1 (MQ=255)
                              gACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGC...CCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGaa                                                                           >  1:1581913/1‑101 (MQ=255)
                              accgcgTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCGATGATCAAATCCGCAATCGGC...CGGGCTCGATC.GTCGCTCCCCCCGCGGGGGCGTGGATCg                                                                             <  1:4740235/96‑1 (MQ=2)
                                ggcgTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.CCG.CCA.C.GTCTTGGAA.CCGCGTGCCATTGGCCCCGGTCGCTCCCCCCGCGGGGGCGCGGGTCGaaa                                                                          >  1:2183431/4‑101 (MQ=2)
                                cgcgTCGCTCCCCCCACGGGGGCGTGGATCGAAACATCGATGATCAAATCCGCAATCGGC...CGGGCTCGATC.GTCGCTCCCCCCGCGGGGGCGTGGATCGaa                                                                           >  1:4868913/4‑101 (MQ=2)
                                 gcgTCGCTTCCCCCGCGGGGGCGTGGATCGAAACATCGATGATCAAATCCGCAATCGGC...CGGGCTCGATC.GTCGCTCCCCCCGCGGGGGCGTGGATCGaaa                                                                          <  2:2291891/99‑1 (MQ=2)
                                   gTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGC...CCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAaacaac                                                                      >  1:3439209/1‑101 (MQ=255)
                                    tCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGC...CCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAAcc                                                                     >  2:5039003/1‑101 (MQ=255)
                                     cGCTCCTCCCGCGGGGGCGTGGATCGAAACACCG.TCGTC.ACCACGCAA.CCGC...GCTGCAACACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAAccc                                                                    >  2:3383640/1‑101 (MQ=37)
                                     cGCTCCCCCCGCGGGGGCGTGGATCGAAACATCGATGATCAAATCCGCAATCGGC...CGGGCTCGATC.GTCGCTCCCCCCGCGGGGGCGTGGATCGAaacggt                                                                      >  1:3082031/1‑98 (MQ=2)
                                     cGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGC...CCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAAccc                                                                    <  2:820631/101‑1 (MQ=255)
                                     cGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGC...CCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAAccc                                                                    <  2:410999/101‑1 (MQ=255)
                                      gCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGC...CCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCg                                                                   <  1:3985309/101‑1 (MQ=255)
                                      gCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGC...CCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCg                                                                   <  1:4220434/101‑1 (MQ=255)
                                       cTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGC...CCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGa                                                                  >  2:4059335/1‑101 (MQ=255)
                                        tCCCCCCGCGGGGGCGTGGATCGAAACATCGATGATCAAATCCGCAATCGGC...CGGGCTCGATC.GTCGCTCCCCCCGCGGGGGCGTGGATCGAaacggtgtc                                                                   >  1:3041637/1‑95 (MQ=2)
                                        tCCCCCCGCGGGGGCGTGGATCGAAACATCGATGATCAAATCCGCAATCGGC...CGGGCTCGATC.GTCGCTCCCCCCGCGGGGGCGTGGATCGAaacggtgtc                                                                   >  1:1614679/1‑95 (MQ=2)
                                        tCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGC...CCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGAt                                                                 >  1:3614242/1‑101 (MQ=255)
                                        tCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGC...CCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGAt                                                                 >  1:3843188/1‑101 (MQ=255)
                                         ccccccGCGGGGGCGTGGATCGAAACATCGATGATCAAATCCGCAATCGGC...CGGGCTCGATC.GTCGCTCCCCCCGCGGGGGCGTGGATCGAaacggtgtcc                                                                  <  2:2623123/101‑8 (MQ=2)
                                         ccccccGCGGGGGCGTGGATCGAAACATCGATGATCAAATCCGCAATCGGC...CGGGCTCGATC.GTCGCTCCCCCCGCGGGGGCGTGGATCGAaacggtgtcc                                                                  >  2:4476684/1‑94 (MQ=2)
                                         ccccccGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGC...CCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATc                                                                <  1:1980732/101‑1 (MQ=255)
                                         ccccccGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGC...CCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATc                                                                <  1:119292/101‑1 (MQ=255)
                                          cccccGCGGGGGCGTGGATCGAAACATCGATGATCAAATCCGCAATCGGC...CGGGCTCGATC.GTCGCTCCCCCCGCGGGGGCGTGGATCGAaacggtgtcca                                                                 <  2:4814664/101‑9 (MQ=2)
                                          cccccGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGC...CCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCa                                                               <  1:2929011/101‑1 (MQ=255)
                                          cccccGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGC...CCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCa                                                               <  2:3689059/101‑1 (MQ=255)
                                           ccccGCGGGGGCGTGGATCGAAACATCGATGATCAAATCCGCAATCGGC...CGGGCTCGATC.GTCGCTCCCCCCGCGGGGGCGTGGATCGAaacggcgtccag                                                                >  2:2467617/1‑92 (MQ=2)
                                               gcgGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGC...CCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGG.cc                                                         <  1:2505843/101‑1 (MQ=255)
                                                 gggggCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGC...CCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGG.CCCg                                                       <  2:530805/101‑1 (MQ=255)
                                                   gggCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGC...CCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGG.CCCGcc                                                     <  2:1066119/101‑1 (MQ=255)
                                                    ggCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGC...CCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGG.CCCGCCt                                                    <  2:296653/101‑1 (MQ=255)
                                                    ggCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGC...CCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGG.CCCGCCt                                                    <  2:945070/101‑1 (MQ=255)
                                                    ggCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGC...CCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGG.CCCGCCt                                                    <  1:1399604/101‑1 (MQ=255)
                                                     gCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGC...CCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGG.CCCGCCTc                                                   <  1:4398254/101‑1 (MQ=255)
                                                     gCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGC...CCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGG.CCCGCCTc                                                   <  2:713565/101‑1 (MQ=255)
                                                      cGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGC...CCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGG.CCCGCCTCa                                                  >  1:4687238/1‑101 (MQ=255)
                                                       gTGGATCGAAACACCG.TCATC.ACCACGCAC.CCGC...CCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGG.CCCGCCTCAg                                                 <  2:1082396/101‑1 (MQ=255)
                                                        tGGATCGAAACACCG.TCATC.ACCACGCAA.CCGC...CCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGG.CCCGCCTCAgc                                                >  1:4577032/1‑101 (MQ=255)
                                                         ggATCGAAACACCG.TCATC.ACCACGCAA.CCGC...CCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGG.CCCGCCTCAgcg                                               >  2:3144670/1‑101 (MQ=255)
                                                         ggATCGAAACACCG.TCATC.ACCACGCAA.CCGC...CCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGG.CCCGCCTCAgcg                                               <  2:2544071/101‑1 (MQ=255)
                                                             cGAAACACCG.TCATC.ACCACGCAA.CCGC...CCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGG.CCCGCCTCAgcggccg                                           >  2:2889924/1‑97 (MQ=255)
                                                               aaaCACCG.TCATC.ACCACGCAA.CCGC...CCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGG.CCCGCCTCAGCGCCgcgc                                         >  2:1253233/1‑101 (MQ=255)
                                                               aaaCACCG.TCATC.ACCACGCAA.CCGC...CCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGG.CCCGCCTCAGCGCCgcgc                                         >  1:1118678/1‑101 (MQ=255)
                                                                 acacCG.TCATC.ACCACGCAA.CCGC...CCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGG.CCCGCCTCAGCGCCGCGCta                                       >  1:1481194/1‑100 (MQ=255)
                                                                 acacCG.TCATC.ACCACGCAA.CCGC...CCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGG.CCCGCCTCAGCGCCGCGCT.g                                      <  2:1581781/101‑1 (MQ=255)
                                                                   acCG.TCATC.ACCACGCAA.CCGC...CCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGG.CCCGCCTCAGCGCCGCGCT.GA.c                                   <  2:1397660/101‑1 (MQ=255)
                                                                        tcatc.aCCACGCAA.CCGC...CCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGG.CCCGCCTCAGCGCCGCGCT.GA.CGTcc                               >  1:137353/1‑100 (MQ=255)
                                                                          atc.aCCACGCAA.CCGC...CCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGG.CCCGCCTCAGCGCCGCGCT.GA.CGTCCCt                             >  1:1037019/1‑101 (MQ=255)
                                                                          atc.aCCACGCAA.CCGC...CCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGG.CCCGCCTCAGCGCCGCGCT.GA.CGTCACt                             >  2:4257180/1‑101 (MQ=255)
                                                                           tc.aCCACGCAA.CCGC...CCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGG.CCCGCCTCAGCGCCGCGCT.GA.CGTCGCTc                            >  1:3570757/1‑101 (MQ=255)
                                                                              accacGCAA.CCGC...CCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGG.CCCGCCTCAGCGCCGCGCT.GA.CGTCGCTccc                          >  1:1000175/1‑101 (MQ=255)
                                                                               ccacGCAC.CCGC...CCTGCCCCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGG.CCCGCCTCAGCGCCGCGCT.CA.CGTCGCTcccc                         <  1:2733781/101‑1 (MQ=255)
                                                                               ccacGCAA.CCGC...CCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGG.CCCGCCTCAGCGCCGCGCT.GA.CGTCGCTcccc                         >  2:3326312/1‑101 (MQ=255)
                                                                               ccacGCAA.CCGC...CCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGG.CCCGCCTCAGCGCCGCGCT.GA.CGTCGCTcccc                         >  1:877460/1‑101 (MQ=255)
                                                                                 acGCAA.CCGC...CCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGG.CCCGCCTCAGCGCCGCGCT.GA.CGTCGCTcccccc                       <  1:2079551/101‑1 (MQ=255)
                                                                                   gCAC.CCGC...CCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGG.CCCGCCTCAGCGCCGCGCT.GA.CGTCGCTCCCCCcgc                     <  2:786732/101‑1 (MQ=255)
                                                                                   gCAA.CCGC...CCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGG.CCCGCCTCAGCGCCGCGCT.GA.CGTCGCTCCCCCcgc                     >  1:1849373/1‑101 (MQ=255)
                                                                                   gCAA.CCGC...CCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGG.CCCGCCTCAGCGCCGCGCT.GA.CGTCGCTCCCCCcgc                     >  1:498381/1‑101 (MQ=255)
                                                                                   ccAA.CCGC...CCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGG.CCCGCCTCAGCGCCGCGCT.GA.CGTCGCTCCCCCcgc                     <  2:109327/100‑1 (MQ=255)
                                                                                     aa.CCGC...CCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGG.CCCGCCCCAGCGCCGCGCT.GA.CGTCGCTCCCCCCGCgg                   >  1:3122509/1‑101 (MQ=255)
                                                                                      a.CCGC...CCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGG.CCCGCCTCAGCGCCGCGCT.GA.CGTCGCTCCCCCCGCggg                  >  1:1521298/1‑101 (MQ=255)
                                                                                      a.CCGC...CCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGG.CCCGCCTCAGCGCCGCGCT.GA.CGTCGCTCCCCCCGCggg                  >  2:323002/1‑101 (MQ=255)
                                                                                           c...ccTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGG.CCCGCCTCAGCGCCGCGCT.GA.CGTCGCTCCCCCCGCGGGGGCg              >  2:2224874/1‑101 (MQ=255)
                                                                                               ccTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGG.CCCGCCTCAGCGCCGCGCT.GA.CGTCGCTCCCCCCGCGGGGGCGt             >  2:3485924/1‑101 (MQ=255)
                                                                                               ccTGCACCACCGGTCGCTCCCCCCGCGGGGGCGGCGATCGAAACAACCCGATCATGG.CCCGCCTCAGCGCCGCGCT.GA.CGTCGCTCCCCCCGCGGGGGCGt             <  1:4336114/101‑1 (MQ=255)
                                                                                                cTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGG.CCCGCCTCAGCGCCGCGCT.GA.CGTCGCTCCCCCCGCGGGGGCGTg            <  2:3298291/101‑1 (MQ=255)
                                                                                                 tGCCCCCCCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGG.CCCGCCTCAGCGCCGCGCT.GA.CGTCGCTCCCCCCGCGGGGGCGTgg           <  2:4029035/101‑1 (MQ=255)
                                                                                                 tGCCCCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGG.CCCGCCTCAGCGCCGCGCT.GA.CGTCGCTCCCCCCGCGGGGGCGTgg           <  2:441107/101‑1 (MQ=255)
                                                                                                    accaccGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGG.CCCGCCTCAGCGCCGCGCT.GA.CGTCGCTCCCCCCGCGGGGGCGTGGATc        >  2:636996/1‑101 (MQ=255)
                                                                                                    accaccGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGG.CCCGCCTCAGCGCCGCGCT.GA.CGTCGCTCCCCCCGCGGGGGCGGGGATc        >  1:4815320/1‑101 (MQ=255)
                                                                                                    accaccGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGG.CACGCCTCAGCGCCGCGCT.GA.CGTCGCTCCCCCCGCGGGGGCGTGGATc        <  1:591651/101‑1 (MQ=255)
                                                                                                     gcgctggTCGCTCCACCCGCGGGGGCGTGGATCGAAACTTGATGACCA.GA.TCCGCAATCG.GCCGGGCTCGATCGTCGCTCCCCCCGCGGGGGCGTGGATCg       <  1:4358757/96‑1 (MQ=0)
                                                                                                     ccaccGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGG.CCCGCCTCAGCGCCGCGCT.GA.CGTCGCTCCCCCCGCGGGGGCGTGGATCg       <  2:59962/101‑1 (MQ=255)
                                                                                                     ccaccGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGG.CCCGCCTCAGCGCCGCGCT.GA.CGTCGCTCCCCCCGCGGGGGCGTGGATCg       <  1:4023952/101‑1 (MQ=255)
                                                                                                      caccGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGG.CCCGCCTCAGCGCCGCGCT.GA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGa      <  2:3088297/101‑1 (MQ=255)
                                                                                                      caccGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCAGGG.CCCGCCTCAGCGCCGGGCT.GA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGa      >  2:223573/1‑101 (MQ=255)
                                                                                                       cccGGTCGCCCCCCCCGCGGGGGCGTGGATCGAAACAACCCGCTCCTGG.CCCGCCTCAGCGCCGCGCT.GA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGaa     <  1:5039333/100‑1 (MQ=255)
                                                                                                       accGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGG.CCCGCCTCAGCGCCGCGCT.GA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGaa     >  2:3196296/1‑101 (MQ=255)
                                                                                                        ccGGTCCCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGG.CCCGCCTCAGCGCCGCGCT.GA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGaaa    <  2:4332163/101‑1 (MQ=255)
                                                                                                         cGGTCGCTCCCCCGGGGGGGGCGTGGATCGAAACAA.CTGACCCGGGAACGGCCTGTGCGCTG.GAC.GT.GTTCGCTCCCCCCGCGGGGGCGTGGATCGAAAct  <  2:1815864/101‑2 (MQ=2)
                                                                                                          ggTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGG.CCCGCCTCAGCGCCGCGCT.GA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACa  >  2:4316758/1‑101 (MQ=255)
                                                                                                          ggTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGG.CCCGCCTCAGCGCCGCGCT.GA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACa  >  1:2937739/1‑101 (MQ=255)
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CTCTTCAATGGATATGGCAAAACCGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGC...CCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGG.CCCGCCTCAGCGCCGCGCT.GA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA  >  NC_014034/1397399‑1397599

Base quality scores:  ATCG  < 3 ≤  ATCG  < 16 ≤  ATCG  < 24 ≤  ATCG  < 33 ≤  ATCG  < 39 ≤  ATCG