New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 = 1562015212 (0.940)132 (0.590) 61/184 5.5 0.54 intergenic (+209/+11) RCAP_rcc01445/RCAP_rcc01446 tonB‑dependent receptor/M20 family peptidase
?NC_014034 1608059 = 14 (0.060)intergenic (+329/‑18) RCAP_rcc01484/murD hypothetical protein/UDP‑N‑acetylmuramoylalanine‑‑D‑glutamate ligase
Rejected: Position hash score below cutoff.

Only 100 of 230 total aligned reads displayed.

CCGGGGCAAAGGGCAGGGAAAAGGGCGCCCGATCCGAGCGCCCTTTGCTTTTATCTTGCCTCAAATATCCCACGGGGGTGCGGGGGTGTGAAA..CCCCC.GCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAATCCGCGCCCAGCTGCGGATGCCCTTGTGGAAGCTCTCAAGGTCATATTTCTCGTTCGGGCTGTGGAT  >  NC_014034/1561916‑1562115
                                                                                                      |                                                                                                    
ccGGGGCAAAGGGCAGGGAAAAGGGCGCCCGATCCGAGCGCCCTTTGCTTTTATCTTGCCTCAAATATCCCACGGGGGTGCGGGGGTGTGAAA..CCCcc.gcc                                                                                                     <  2:3887062/101‑1 (MQ=255)
  ggggCAAAGGGCAGGGAAAAGGGCGCCCGATCCGAGCGCCCTTTGCTTTTATCTTGCCTCAAATATCCCACGGGGGTGCGGGGGTGTGAAA..CCCcc.gccgc                                                                                                   >  1:1454475/1‑101 (MQ=255)
   gggCAAAGGGCAGGGAAAAGGGCGCCCGATCCGAGCGCCCTTTGCTTTTATCTTGCCTCAAATATCCCACGGGGGTGCGGGGGTGTGAAA..CCCcc.gccgcc                                                                                                  >  2:4179539/1‑101 (MQ=255)
      cAAAGGGCAGGGAAAAGGGCGCCCGATCCGAGCGCCCTTTGCTTTTATCTTGCCTCAAATATCCCACGGGGGTGCGGGGGTGTGAAA..CCCCC.gccgccgcc                                                                                               >  2:3923532/1‑101 (MQ=255)
       aaggggCAGGGAAAAGGGCGCCCGATCCGAGCGCCCTTTTCTTTTATCTTGCCTCAAATACCCCACGGGGGGGCGGGGGTGTGAAC..CCCCC.GCCGCCGccc                                                                                              <  2:4150879/98‑1 (MQ=38)
       aaaGGGCAGGGAAAAGGGCGCCCGATCCGAGCGCCCTTTGCTTTTATCTTGCCTCAAATATCCCACGGGGGTGCGGGGGTGTGAAA..CCCCC.GCCGCCGccc                                                                                              >  1:1335754/1‑101 (MQ=255)
        aaGGGCAGGGAAAAGGGCGCCCGATCCGAGCGCCCTTTGCTTTTATCTTGCCTCAAATATCCCACGGGGGTGCGGGGGTGTGAAA..CCCCC.GCCGCCGCCCg                                                                                             >  1:2918874/1‑101 (MQ=255)
        aaGGGCAGGAAAAGGGGCGCCCGATCCGAGCGCCTTTTGCTTTTATCTTGCCTAAAATACCCCGGGGGGGTGGGGGGGTGTAAAC..CCCCC.GCCGCCGCCCg                                                                                             <  2:4631173/101‑1 (MQ=25)
         aggggggggAAAGGGGCCCCCGGCCCGGGC.CTCTTTTTTTTTTTTTTTTCCCAAAAATCCCCCGGGGGGGGGGGGGGGTGAAACCCCCCC.GCCGCCGCCCg                                                                                             <  2:2627034/95‑1 (MQ=255)
         aGGGCAGGGAAAAGGGCGCCCGATCCGAGCGCCCTTTGCTTTTATCTTGCCTCAAATATCCCACGGGGGTGCGGGGGTGTGAAA..CCCCC.GCCGCCGCCCgg                                                                                            >  1:3408908/1‑101 (MQ=255)
          gggCAGGGAAAAGGGCGCCCGATCCGAGCGCCCTTTGCTTTTATCTTGCCTCAAATATCCCACGGGGGTGCGGGGGTGTGAAA..CCCCC.GCCGCCGCCCGGt                                                                                           >  2:984295/1‑101 (MQ=255)
            gCAGGGAAAAGGGCGCCCGATCCGAGCGCCCTTTGCTTTTATCTTGCCTCAAATATCCCACGGGGGTGCGGGGGTGTGAAA..CCCCC.GCCGCCGCCCGGTCa                                                                                         >  2:3746138/1‑101 (MQ=255)
               gggAAAAGGGCGCCCGATCCGAGCGCCCTTTGCTTTTATCTTGCCTCAAATATCCCACGGGGGTGCGGGGGTGTGAAA..CCCCC.GCCGCCGCCCGGTCAGcc                                                                                      >  1:474285/1‑101 (MQ=255)
                ggAAAAGGGCGCCCGATCCGAGCGCCCTTTGCTTTTATCTTGCCTCAAATATCCCACGGGGGTGCGGGGGTGTGAAA..CCCCC.GCCGCCGCCCGGTCAGccc                                                                                     >  1:3114502/1‑101 (MQ=255)
                gaaaagGGGCGCCCGCCCCGAGCCCTCTTTTTTTTTATCTTCCATAAAATACCCCCGGGGGGTGGGGGGGTGGAAAC..CCCCC.GCCGCCGCCCGGTCAGccc                                                                                     <  2:2986079/99‑1 (MQ=255)
                  aaagGGGCCCCCGCCCCGGGCGCTTTTTTTTTTTATCTTGCCTAAAATACCCCGGGGGGGGGGGGGGGTGTGACC..CCCCC.GCCGCCGCCCGGTCAGCCcgc                                                                                   <  2:4944375/101‑1 (MQ=255)
                  aaaaGGGCGCCCGATCCGAGCGCCCTTTGCTTTTATCTTGCCTCAAATATCCCACGGGGGTGCGGGGGTGTGAAA..CCCCC.GCCGCCGCCCGGTCAGCCcgc                                                                                   >  1:1729365/1‑101 (MQ=255)
                  aaaaGGGCGCCCGATCCGAGCGCCCTTTGCTTTTATCTTGCCTCAAATATCCCACGGGGGTGCGGGGGTGTGAAA..CCCCC.GCCGCCGCCCGGTCAGCCcgc                                                                                   >  2:2741672/1‑101 (MQ=255)
                   aaaGGGCGCCCGATCCGAGCGCCCTTTGCTTTTATCTTGCCTCAAATATCCCACGGGGGTGCGGGGGTGTGAAA..CCCCC.GCCGCCGCCCGGTCAGCCcgcg                                                                                  >  1:678526/1‑101 (MQ=255)
                   aaaAGGCGCCCGATCCGTGAGCCGTTTGCTTTTATCTTGCCTCAAATATTCCACGGGGGTGCGGGGGTGCGAAA..CCCCA.GCCGACGCCCGGTCAGCCcgcg                                                                                  >  2:812063/1‑101 (MQ=25)
                    aaGGGCGCCCGATCCGAGCGCCCTTTGCTTTTATCTTGCCTCAAATATCCCACGGGGGTGCGGGGGTGTGAAA..CCCCC.GCCGCCGCCCGGTCAGCCCGCGa                                                                                 >  1:3612623/1‑101 (MQ=255)
                    aaGGGCGCCCGATCCGAGCGCCCTTTGCTTTTATCTTGCCTCAAATATCCCACGGGGGTGCGGGGGTGTGAAA..CCCCC.GCCGCCGCCCGGTCAGCCCGCGa                                                                                 >  2:2729951/1‑101 (MQ=255)
                    aaGGGCGCCCGATCCGAGCGCCCTTTGCTTTTATCTTGCCTCAAATATCCCACGGGGGTGCGGGGGGGTGAAA..CCCCC.GCCGCCGCCCGGTCAGCCCGCGa                                                                                 >  1:632273/1‑101 (MQ=255)
                    aaGGGCGCCCGATCCGAGCGCCCTTTGCTTTTATCTTGCCTCAAATATCCCACGGGGATGCGGGGGTGTGAAA..CCCCC.GCCGCCGCCCGGTCAGCCCGCGa                                                                                 >  1:1944474/1‑101 (MQ=255)
                     aGGGCGCCCGATCCGACCCCCTTTTCCTTTTATCTTGCCTCAAATACCCCGGGGGGGGGCGGGGGTGTGAAC..CCCCC.GCCGCCGCCCGGTCAGCCCGCGAt                                                                                <  2:3220922/101‑1 (MQ=37)
                            ccGATCCGAGCGCCCTTTGCTTTTATCTTGCCTCAAATATCCCACGGGGGTGCGGGGGTGTGAAA..CCCCC.GCCGCCGCCCGGTCAGCCCGCGATGCGGTcc                                                                         >  2:3807155/1‑101 (MQ=255)
                             cGATCCGAGCGCCCTTTGCTTTTATCTTGCCTCAAATATCCCACGGGGGTGCGGGGGTGTGAAA..CCCCC.GCCGCCGCCCGGTCAGCCCGCGATGCGGTCCa                                                                        >  1:2251230/1‑101 (MQ=255)
                             cGACCCGCGCGCCTTTTTTTTTTATCTTCCCCCAAATCCCCCGGGGGGGTGGGGGGGTGTAAAC..CCCCC.GCCGCCGCCCGGTCAGCCCGCGATGCGGTCCa                                                                        <  2:2905330/101‑1 (MQ=255)
                              gctccggccgcCCTTTTTTTTTATCTTGCCGAAAATACCCCGCGGGGGGGGGGGGGTGGGAAC..CCCCC.GCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAg                                                                       <  1:2409873/93‑1 (MQ=255)
                              gATCCGAGCGCCCTTTGCTTTTATCTTGCCTCAAATATCCCACGGGGGTGCGGGGGTGTGAAA..CCCCC.GCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAg                                                                       >  2:3669456/1‑101 (MQ=255)
                              gATCCGAGCGCCCTTTGCTTTTATCTTGCCTCAAATATCCCACGGGGGTGCGGGGGTGTGAAA..CCCCC.GCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAg                                                                       >  1:2854487/1‑101 (MQ=255)
                               aTCCGAGCGCCCTTTGCTTTTATCTTGCCTCAAATATCCCACGGGGGTGCGGGGGTGTGAAA..CCCCC.GCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGa                                                                      >  1:4906412/1‑101 (MQ=255)
                                 ccGAGCGCCCTTTGCTTTTATCTTGCCTCAAATATCCCACGGGGGTGCGGGGGTGTGAAA..CCCCC.GCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAAt                                                                    >  1:4266692/1‑101 (MQ=255)
                                 ccGAGCGCCCTTTGCTTTTATCTTGCCTCAAATATCCCACGGGGGTGCGGGGGTGTGAAA..CCCCC.GCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAAt                                                                    >  2:1974428/1‑101 (MQ=255)
                                   gAGCGCCCTTTGCTTTTATCTTGCCTCAAATATCCCACGGGGGTGCGGGGGTGTGAAA..CCCCC.GCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAATcc                                                                  >  2:1706777/1‑101 (MQ=255)
                                       gcCCTTTGCTTTTATCTTGCCTCAAATATCCCACGGGGGTGCGGGGGTGTGAAA..CCCCC.GCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAATCCgcgc                                                              >  1:2709320/1‑101 (MQ=255)
                                       gcCCTTTGCTTTTATCTTGCCTCAAATATCCCACGGGGGTGCGGGGGTGTGAAA..CCCCC.GCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAATCCgcgc                                                              >  1:4099419/1‑101 (MQ=255)
                                        cccTTTGCTTTTATTTTGCCTAAAATATCCCAGGGCGGTGGGGGGGTTTGAAC..CCCCC.GCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAATCCGCGcc                                                             <  2:3384384/101‑1 (MQ=255)
                                          cTTTGCTTTTATCTTGCCTCAAATATCCCACGGGGGTGCGGGGGTGTGAAA..CCCCC.GCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAATCCGCGCCCa                                                           >  1:4774021/1‑101 (MQ=255)
                                            ttGCTTTTATCTTGCCTCAAATATCCCACGGGGGTGCGGGGGTGTGAAA..CCCCC.GCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAATCCGCGCCCAGc                                                         >  2:4555854/1‑101 (MQ=255)
                                             tGCTTTTATCTTGCCTCAAATATCCCACGGGGGTGCGGGGGTGTGAAA..CCCCC.GCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAATCCGCGCCCAGCt                                                        >  1:3634533/1‑101 (MQ=255)
                                             tGCTTTTATCTTGCCTCAAATATCCCACGGGGGTGCGGGGGTGTGAAA..CCCCC.GCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAATCCGCGCCCAGCt                                                        >  2:4782092/1‑101 (MQ=255)
                                              gCTTTTATCTTGCCTCAAATATCCCACGGGGGTGCGGGGGTGTGAAA..CCCCC.GCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAATCCGCGCCCAGCTg                                                       >  1:1221334/1‑101 (MQ=255)
                                              gCTTTTATCTTGCCTCAAATATCCCACGGGGGTGCGGGGGTGTGAAA..CCCCC.GCCGCCGCCCGGTCAGCCCGCGATGCGGCCCAGAATCCGCGCCCAGCTg                                                       >  1:1548737/1‑101 (MQ=255)
                                               cTTTTATTTTCCCCAAAATCTCCCGGGGGGGGGCGGGGGTGTGAAC..CCCCC.GCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAATCCGCGCCCAGCTGc                                                      <  1:2263417/101‑1 (MQ=255)
                                               cTTTTATCTTGCCTCAAATATCCCACGGGGGTGCGGGGGTGTGAAA..CCCCC.GCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAATCCGCGCCCAGCTGc                                                      >  1:3826324/1‑101 (MQ=255)
                                                 tttATCTTGCCTAAAATACCCCGCGGGGGGGGGGGGGTTGGAAC..CCCCC.GCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAATCCGCGCCCAGCTGCgg                                                    <  1:1558445/101‑1 (MQ=255)
                                                  ttATCTTGCCTCAAATATCCCACGGGGGTGCGGGGGTGTGAAA..CCCCC.GCCGCCGCCCGGTCAGCCCGCGATGCGGTCCCGAATCCGCGCCCAGCTGCggc                                                   >  1:1646456/1‑100 (MQ=255)
                                                   tATCTTGCCTCAAATATCCCACGGGGGTGCGGGGGTGTGAAA..CCCCC.GCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAATCCGCGCCCAGCTGCGGAt                                                  >  1:3843992/1‑101 (MQ=255)
                                                   tATCTTGCCTAAAATACCCCACGGGGGTGGGGGGTTGTGAAC..CCCCC.GCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAATCCGCGCCCAGCTGCGGAt                                                  <  2:2977813/101‑1 (MQ=255)
                                                     tCTTGCCTCAAATATCCCACGGGGGTGCGGGGGTGTGAAA..CCCCC.GCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAATCCGCGCCCAGCTGCGGATGc                                                >  2:901912/1‑101 (MQ=255)
                                                     tCTTGCCTCAAATATCCCACGGGGGTGCGGGGGTGTGAAA..CCCCC.GCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAATCCGCGCCCAGCTGCGGATGc                                                >  2:2417243/1‑101 (MQ=255)
                                                      cTTGCCTCAAATATCCCACGGGGGTGCGGGGGTGTGAAA..CCCCC.GCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAATCCGCGCCCAGCTGCGGATGcc                                               >  2:633472/1‑101 (MQ=255)
                                                        tGCCTCAAATATCCCACGGGGGTGCGGGGGTGTGAAA..CCCCC.GCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAATCCGCGCCCAGCTGCGGATGCCCt                                             >  1:3805633/1‑101 (MQ=255)
                                                             acaacctCCCACGGGGGGGGGGGGGGGTCAAC..CCCCCGGCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAATCCGCGCCCAGCTGCGGATGCCCTtgtg                                         <  2:1144401/95‑1 (MQ=255)
                                                             aaaacaccccAGGGGGGGGGGGGGGTGCCAGC..CCCCC.GCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAATCCGCGCCCAGCTGCGGATGCCCTTGTgg                                        <  2:3067863/94‑1 (MQ=255)
                                                              aaaTATCCCACGGGGGTGCGGGGGTGTGAAA..CCCCC.GCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAATCCGCGCCCAGCTGCGGATGCCCTTGTGGa                                       >  1:362912/1‑101 (MQ=255)
                                                              aaaTATCCCACGGGGGTGCGGGGGTGTGAAA..CCCCC.GCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAATCCGCGCCCAGCTGCGGATGCCCTTGTGGa                                       >  1:2187590/1‑101 (MQ=255)
                                                                atatCCCACGGGGGTGCGGGGGTGTGAAA..CCCCC.GCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAATCCGCGCCCAGGTGCGGATGCCCTTGTGGAAg                                     >  1:3229366/1‑101 (MQ=255)
                                                                 taccccACGGGGGTGCGGGGGTGTGAAC..CCCCC.GCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAATCCGCGCCCAGCTGCGGATGCCCTTGTGGAAGc                                    <  2:678437/98‑1 (MQ=255)
                                                                  atCCCACGGGGGTGCGGGGGTGTGAAA..CCCCC.GCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAATCCGCGCCCAGCTGCGGATGCCCTTGTGGAAGct                                   >  1:102125/1‑101 (MQ=255)
                                                                    cccggggggttgcggggtggTAACC..CCCCC.GCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAATCCGCGCCCAGCTGCGGATGCCCTTGTGGAAGctct                                 <  2:4075548/96‑1 (MQ=255)
                                                                     cggggggggggggggggggAGACC..CCCCC.GCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAATCCGCGCCCAGCTGCGGATGCCCTTGTGGAAGCtctc                                <  1:567690/97‑1 (MQ=255)
                                                                     ccAGGGGGGTGCGGGGGTGTGACC..CCCCC.GCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAATCCGCGCCCAGCTGCGGATGCCCTTGTGGAAGCtctc                                <  2:1550350/101‑1 (MQ=255)
                                                                     ccACGGGGGTGCGGGGGTGTGAAA..CCCCC.GCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAATCCGCGCCCAGCTGCGGATGCCCTTGTGGAAGCtctc                                >  1:2596342/1‑101 (MQ=255)
                                                                      cACGGGGGTGCGGGGGTGTGAAA..CCCCC.GCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAATCCGCGCCCAGCTGCGGATGCCCTTGTGGAAGCTCTCa                               >  1:1476893/1‑101 (MQ=255)
                                                                       ggggggcgggggggggtTGAAC..CCCCCTCCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAATCCGCGCCCAGCTGCGGATGCCCTTGTGGAAGCTCTCa                               <  1:4173309/91‑1 (MQ=255)
                                                                        cgggggtgcgggggtgTGAAA..CCCCC.GCCGCCGCCCGGTCAGCCCGCGCTGCGGTCCAGAATCCGCGCCCAGCTGCGGATGCCCTTGTGGAAGCTCTCAAg                             >  2:3976185/1‑101 (MQ=255)
                                                                        cgggggtgcgggggtgTGAAA..CCCCC.GCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAATCCGCGCCCAGCTGCGGATGCCCTTGTGGAAGCTCTCAAg                             >  2:1352099/1‑101 (MQ=255)
                                                                        atctggtgcgggggtgTGAAA..CCCCC.GCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAATCCGCGCCCAGCTGCGGATGCCCTTGTGGAAGCTCTCAAg                             <  2:3497051/97‑1 (MQ=255)
                                                                           gggtgcgggggtgTGAAA..CCCCC.GCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAATCCGCGCCCAGCTGCGGATGCCCTTGTGGAAGCTCTCAAGGTc                          >  1:788088/1‑101 (MQ=255)
                                                                            gttgcgggggtgTGACC..CCCCC.GCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAATCCGCGCCCAGCTGCGGATGCCCTTGTGGAAGCTCTCAAGGTCa                         <  2:3408645/99‑1 (MQ=255)
                                                                             gtgcgggggtgTGAAA..CCCCC.GCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAATCCGCGCCCAGCTGCGGATGCCCTTGTGGAAGCTCTCAAGGTCat                        >  2:507086/1‑101 (MQ=255)
                                                                             gggggggggttTAAAC..CCCCC.GCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAATCCGCGCCCAGCTGCGGATGCCCTTGTGGAAGCTCTCAAGGTCat                        <  1:830258/97‑1 (MQ=255)
                                                                               ggggggttgTGAAC..CCCCC.GCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAATCCGCGCCCAGCTGCGGATGCCCTTGTGGAAGCTCTCAAGGTCatat                      <  2:2995421/99‑1 (MQ=255)
                                                                                gggttggctgAAC..CCCCC.GCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAATCCGCGCCCAGCTGCGGATGCCCTTGTGGAAGCTCTCAAGGTCATAtt                     <  1:1603899/93‑1 (MQ=255)
                                                                                cgggggtgTGAAA..CCCCC.GCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAATCCGCGCCCAGCTGCGGATGCCCTTGTGGAAGCTCTCAAGGTCATAtt                     >  1:4622045/1‑101 (MQ=255)
                                                                                 gggggtgTGAAA..CCCCC.GCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAATCCGCGCCCAGCTGCGGATGCCCTTGTGGAAGCTCTCAAGGTCATAttt                    >  2:1286676/1‑101 (MQ=255)
                                                                                 gggggtgTAACC..CCCCC.GCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAATCCGCGCCCAGCTGCGGATGCCCTTGTGGAAGCTCTCAAGGTCATAttt                    <  2:4499255/101‑1 (MQ=255)
                                                                                  ggggtgTGAAA..CCCCC.GCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAATCCGCGCCCAGCTGCGGATGCCCTTGTGGAAGCTCTCAAGGTCATATTtc                   >  1:2476071/1‑101 (MQ=255)
                                                                                  ggggtgTGAAA..CCCCC.GCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAATCCGCGCCCAGCTGCGGATGCCCTTGTGGAAGCTCTCAAGGTCATATTtc                   <  2:787986/101‑1 (MQ=255)
                                                                                   gggtgTGAAA..CCCCC.GCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAATCCGCGCCCAGCTGCGGATGCCCTTGTGGAAGCTCTCAAGGTCATATTtct                  >  2:1483354/1‑101 (MQ=255)
                                                                                     ggatgaaaacccccc.GCCGCCGCCCGGTCAGCCCGCGATGCGGACCAGAATCCGCGCCCAGCTGCGGATGCCCTTGTGGAAGCTCTCAAGGTCATATTtct                  <  2:4525902/91‑1 (MQ=255)
                                                                                      tgtgAAA..CCCCC.GCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAATCCGCGCCCAGCTGCGGATGCCCTTGTGGAAGCTCTCAAGGTCATATTTCTCGt               >  2:2242346/1‑101 (MQ=255)
                                                                                       gtgAAC..CCCCC.GCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAATCCGCGCCCAGCTGCGGATGCCCTTGTGGAAGCTCTCAAGGTCATATTTCTCGtt              <  1:3453595/101‑1 (MQ=255)
                                                                                       gtgAAA..CCCCC.GCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAATCCGCGCCCAGCTGCGGATGCCCTTGTGGAAGCTCTCAAGGTCATATTTCTCGtt              >  2:1825990/1‑101 (MQ=255)
                                                                                        tgAAA..CCCCC.GCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAATCCGCGCCCAGCTGCGGATGCCCTTGTGGAAGCTCTCAAGGTCATATTTCTCGTTc             >  2:2297612/1‑101 (MQ=255)
                                                                                        tgAAA..CCCCC.GCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAATCCGCGCCCAGCTGCGGATGCCCTTGTGGAAGCCCTCAAGGTCATATTTCTCGTTc             >  2:3143579/1‑101 (MQ=255)
                                                                                         ccccgcccccc.CCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAATCCGCGCCCAGCTGCGGATGCCCTTGTGGAAGCTCTCAAGGTCATATTTCTCGtt              <  1:986603/95‑1 (MQ=255)
                                                                                          aaa..CCCCC.GCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAATCCGCGCCCAGCTGCGGATGCCCTTGTGGAAGCTCTCAAGGTCATATTTCTCGTTCgg           >  2:4220894/1‑101 (MQ=255)
                                                                                           caccccccc.GCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAATCCGCGCCCAGCTGCGGATGCCCTTGTGGAAGCTCTCAAGGTCATATTTCTCGTTCg            <  1:3576909/97‑1 (MQ=255)
                                                                                            accccccc.GCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAATCCGCGCCCAGCTGCGGATGCCCTTGTGGAAGCTCTCAAGGTCATATTTCTCGTTCgg           <  1:299443/98‑1 (MQ=255)
                                                                                            accccccc.GCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAATCCGCGCCCAGCTGCGGATGCCCTTGTGGAAGCTCTCAAGGTCATATTTCTCGTTCgg           <  1:1974572/98‑1 (MQ=255)
                                                                                             acccccc.GCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAATCCGCGCCCAGCTGCGGATGCCCTTGTGGAAGCTCTCAAGGTCATATTTCTCGTTCggg          <  1:507151/99‑1 (MQ=255)
                                                                                              cccccg.GCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAATCCGCGCCCAGCTGCGGATGCCCTTGTGGAAGCTCTCAAGGTCATATTTCTCGTTCGGGc         <  2:23160/100‑1 (MQ=255)
                                                                                               ccccc.GCCGCCGCCCGGGCAGCCCGCGATGCGGTCCAGAATCCGCGCCCAGCTGCGGATGCCCTTGTGGAAGCTCTCAAGGTCATATTTCTCGTTCGGGCt        <  1:2730152/101‑1 (MQ=255)
                                                                                                cccc.GCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAATCCGCGCCCAGCTGCGGATGCCCTTGTGGAAGCTCTCAAGGTCATATTTCTCGTTCGGGCtg       >  1:3048218/1‑101 (MQ=255)
                                                                                                cccc.CCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAATCCGCGCCCAGCTGCGGATGCCCTTGTGGAAGCTCTCAAGGTCATATTTCTCGTTCGGGCtg       <  2:1208273/101‑1 (MQ=255)
                                                                                                  cc.gccgccgCCCGGTCAGCCCGCGATGCGGTCCAGAATCCGCGCCCAGCTGCGGATGCCCTTGTGGAAGCTCTCAAGGTCATATTTCTCGTTCGGGCtgtg     <  1:1504013/101‑1 (MQ=255)
                                                                                                   cccccgccgccCGGTCAGCCCGCGATGCGGTCCAGAATCCGCGCCCAGCTGCGGATGCCCTTGTGGAAGCTCTCAAGGTCATATTTCTCGTTCGGGCtgtg     <  1:1316288/98‑1 (MQ=255)
                                                                                                      |                                                                                                    
CCGGGGCAAAGGGCAGGGAAAAGGGCGCCCGATCCGAGCGCCCTTTGCTTTTATCTTGCCTCAAATATCCCACGGGGGTGCGGGGGTGTGAAA..CCCCC.GCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAATCCGCGCCCAGCTGCGGATGCCCTTGTGGAAGCTCTCAAGGTCATATTTCTCGTTCGGGCTGTGGAT  >  NC_014034/1561916‑1562115

Base quality scores:  ATCG  < 3 ≤  ATCG  < 18 ≤  ATCG  < 27 ≤  ATCG  < 34 ≤  ATCG  < 41 ≤  ATCG