New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	744786 =	25 (0.110)	10 (0.040)	5/182	25.5	0.26	intergenic (+171/+41)	idi2/bchO	isopentenyl‑diphosphate delta‑isomerase/magnesium‑chelatase BchO
	?	NC_014034	= 1732858	31 (0.130)					intergenic (‑282/‑121)	RCAP_rcc01601/tgt	FeS assembly SUF system protein/queuine tRNA‑ribosyltransferase
Rejected: Position hash score below cutoff.

TGGGGCAAGATGAAATGAATGACTTTCCGTCTGCGGCGGTACAGCCTGTCCCACCCCTGCTTTTCCTTGGCAAAATACGCCGGGGGGTGCGGGGGGCGGAGCCCCCCGCGGGTCGCCTCGGGCCTGCCCGAGGCGAAATCTCACCCCTCGAGCCAGTCCAGAATCATCCCTGAAAGCCCATCCGCGGCAACCTCGTGGAT  >  NC_014034/744687‑744886                                                                                                    |                                                                                                     tGGGGCAAGATGAAATGAACGACTTTCCGTCTGCGGCGGTACAGCCTGTCCCACCCCTGCTTTTCCTTGGCAAAATACGCCGGGGGGTGCAGGGGGCGGAg                                                                                                     <  2:1552753/101‑1 (MQ=255)  ggggCAAGATGAAATGAATGACTTTCCGTCTGCGGCGGTACAGCCTGTCCCACCCCTGCTTTTCCTTTGCAAAATACGCCGGGGGGGGCGGGGGGCAGatc                                                                                                    >  1:366550/1‑99 (MQ=255)  ggggCAAGATGAAATGAATGACTTTCCGTCTGCGGCGGTACAGCCTGTCCCACCCCTGCTTTTCCTTGGCAAAATACGCCGGGGGGTGCGGGGGGCGGAGc                                                                                                    <  1:1824142/101‑1 (MQ=255)  ggggCAAGATGAAATGAATGACTTTCCGTCTGCGGCGGTACAGCCTGTCCCACCCCTGCTTTTCCTTGGCAAAATACGCCGGGGGGTGCGGGGGGCGGAGc                                                                                                    <  2:4699319/101‑1 (MQ=255)  ggggCAAGATGAAATGAATGACTTTCCGTCTGCGGCGGTACAGCCTGTCCCACCCCTGCTTTTCCTTGGCAAAATACGCCGGGGGGTGCGGGGGGCGGAGc                                                                                                    <  1:2024239/101‑1 (MQ=255)    ggCAAGATGAAATGAATGACTTTCCGTCTGCGGCGGTACAGCCTGTCCCACCCCTGCTTTTCCTTGGCAAAATACGCCGGGGGGTGCGGGGGGCGGAGccc                                                                                                  <  1:4770524/101‑1 (MQ=255)      cAAGATGAAATGAATGACTTTCCGTCTGCGGCGGTACAGCCTGTCCCACCCCTGCTTTTCCTTGGCAAAATACGCCGGGGGGTGCGGGGGGCGGAGccccc                                                                                                <  1:4547622/101‑1 (MQ=255)                  aatgaCTTTCCGTCTGCGGCGGTACAGCCTGTCCCACCCCTGCTTTTCCTTGGCAAAATACGCCGGGGGGTGCGGGGGGCGGAGCCCCCCGCGGGGCGccc                                                                                    >  1:1181757/1‑100 (MQ=255)                        tttCCGTCTGCGGCGGTACAGCCTGTCCCACCCCTGCTTTTCCTTGGCAAAATACGCCGGGGGGTGCGGGGGGCGGAGCCCCCCGCGGGGCGCCTCGGGcc                                                                              >  2:540863/1‑101 (MQ=255)                              tCTGCGGCGGTACAGCCTGTCCCACCCCTGCTTTTCCTTGGCAAAATACGCCGGGGGGTGCGGGGGGCGGAGCCCCCCGCGGGGCGCCTCGGGCCCGcccc                                                                        >  2:3005217/1‑100 (MQ=255)                              tCTGCGGCGGTACAGCCTGTCCCACCCCTGCTTTTCCTTGGCAAAATACGCCGGGGGGTGCGGGGGGCGGAGCCCCCCGCGGGGCGCCCCGGGCCTGcccc                                                                        >  1:4786631/1‑100 (MQ=255)                                     cggTACAGCCTGTCCCACCCCTGCTTTTCCTTGGCAAAATACGCCGGGGGGTGCGGGGGGCGGAGCCCCCCGCGGGGCGCCCCGGGCCTGCCCCCGGCgga                                                                 >  1:3536043/1‑99 (MQ=18)                                           aGCCTGTCCCACCCCTGCTTTTCCTTGGCAAAATACGCCGGGGGGTGCGGGGGGCGGAGCCCCCCGCGGGGCGCCCCGGGCCTGCCCGAGGCGAAATCTCa                                                           >  1:1976687/1‑101 (MQ=255)                                              cTGTCCCACCCCTGCTTTTCCTTGGCAAAATACGCCGGGGGGTGCGGGGGGCGGAGCCCCCCGCGGGCCGCCCCGGGGCTGCCCGCGGGGGAAACCCAccc                                                        >  1:4334138/1‑101 (MQ=14)                                                        ccTGCTTTTCCTTGGCAAAATACGCCGGGGGGTGCGGGGGGCGGAGCCCCCCGCGGGTCGCCTCGGGCCTGCCCGAGGCGAAATCTCAACCCTCGAGCCAg                                              >  2:3240133/1‑101 (MQ=255)                                                                   ttGGCAAAATACGCCGGGGGGTGCGGGGGGCGGAGCCCCCCGCGGGGCGCCCCGGGCCTGCCCGAGGCGAAATCTCACCCCTCCAGCCCGTCCCGAatcat                                   >  2:115537/1‑101 (MQ=21)                                                                          aaTACGCCGGGGGGTGCGGGGGGCGGAGCCCCCCGCGGGGCGCCTCGGGCCTGCCCGAGGCGAAATCTCACCCCTCGAGCCAGTCCAGAATCATCCCTGaa                            >  1:3563856/1‑101 (MQ=255)                                                                                 cGGGGGGTGCGGGGGGCGGAGCCCCCCGCGGGTCGCCTCGGGCCTGCCCGAGGGGAAATCTCACCCCTCGAGCCAGTCCAGAATCATCCCTGAAAGCCCac                     >  2:4712632/1‑100 (MQ=255)                                                                                 cGGGGGGTGCGGGGGGCGGAGCCCCCCGCGGGTCGCCTCGGGCCTGCCCGAGGCGAAATCTCACCCCTCGAGCCAGTCCAGAATCATCCCTGAAAGCCCAt                     >  1:4945669/1‑101 (MQ=255)                                                                                   gggggTGCGGGGGGCGGAGCCCCCCGCGGGCCGCCTCGGGGCCGCCCGTGGCGGAATTCCCCCCCTCGAGCCAGGCCAGAATCACTCCTGACAGCCCAtgc                   >  2:321701/1‑99 (MQ=16)                                                                                    ggggTGCGGGGGGCGGAGCCCCCCGCGGGTCGCCTCGGGCCTGCCCGAGGCGAAATCTCACCCCTCGAGCCCGTCCAGAATCATCCCTGAAAGCCCATCcg                  >  2:1520827/1‑101 (MQ=255)                                                                                     gggTGCGGGGGGCGGAGCCCCCCGCGGGTCGCCTCGGGCCTGCCCGAGGCGAAATCTCACCCCTCGAGCCAGTCCAGAATCATCCCTGAAAGCCCATCcgc                 >  1:2812681/1‑101 (MQ=255)                                                                                       gTGCGGGGGGCGGAGCCCCCCGCGGGGCGCCTCCGGCCTGCCCGAGGCGAAATCTCACCCCTCGAGCCAGTCCAGAATCATCCCTGAAAGCCCATCCGCgg               >  2:2862975/1‑101 (MQ=255)                                                                                          cGGGGGGCGGAGCCCCCCGCGGGTCGCCTCGGGCCTGCCCGAGGCGAAATCTCACCCCTCGAGCCAGTCCAGAATCATCCCTGAAAGCCACTCCGCGGAaa            >  2:1526298/1‑101 (MQ=255)                                                                                           ggggggCGGAGCCCCCCGCGGGTCGCCTCGGGCCTGCCCGAGGCGAAATCTCACCCCTCGAGCCAGTCCAGAATCATCCCTGAAAGCCCATCCGCGGCAAc           >  2:2998049/1‑101 (MQ=255)                                                                                            gggggCGGAGCCCCCCGCGGGTCGCCTCGGGCCTGCCCGAGGCGAAATCTCACCCCTCGAGCCAGTCCAGAATCATCCCTGAAAGCCCATCCGCGGCAAcc          >  2:4098732/1‑101 (MQ=255)                                                                                            gggggCGGAGCCCCCCGCGGGTCGCCTCGGGCCTGCCCGAGGCGAAATCTCACCCCTCGAGCCAGTCCAGAATCATCCCTGAAAGCCCATCCGCGGCAAcc          >  1:3942920/1‑101 (MQ=255)                                                                                             ggggCGGAGCCCCCCGCGGGTCGCCCCCGGCCTGCCCGAGGCGAAATCTCACCCCCCGAGCCCGTCCAGAATCAACCCTGAAAGCCCCTCCGCGGCCAccc         >  2:2440555/1‑100 (MQ=25)                                                                                              gggCGGAGCCCCCCGCGGGTCGCCTCGGGCCTGCCCGAGGCGAAATCTCACCCCTCGAGCCAGTCCAGAATCATCCCTGAAAGCCCATCCGCGGCAACCTc        >  1:617768/1‑101 (MQ=255)                                                                                                 cGGAGCCCCCCGCGGGTCGCCTCGGGCCTGCCCGAGGCGAAATCTCACCCCTCGAGCCAGTCCAGAATCATCCCTGAAAGCCCATCCGCGGCAACCTCGTg     >  2:3974515/1‑101 (MQ=255)                                                                                                  ggAGCCCCCCGCGGGTCGCCTCGGGCCTGCCCGAGGCGAAATCTCACCCCTCGAGCCAGTCCAGAATCATCCCTGAAAGCCCATCCGCGGCAACCTCGTgg    >  2:2867246/1‑101 (MQ=255)                                                                                                   gAGCCCCCCGCGGGTCGCCTCGGGCCTGCCCGAGGCGAAATCTCACCCCTCGAGCCAGTCCAGAATCATCCCTGAAAGCCCATCCGCGGCAACCTCGTGGa   >  2:3480498/1‑101 (MQ=255)                                                                                                    aGCCCCCCGCGGGTCGCCTCGGGCCTGCCCGAGGCGAAATCTCACCCCTCGAGCCAGTCCAGAATCATCCCTGAAAGCCCATCCGCGGCAACCTCGTGGAt  >  2:843148/1‑101 (MQ=255)                                                                                                    |                                                                                                     TGGGGCAAGATGAAATGAATGACTTTCCGTCTGCGGCGGTACAGCCTGTCCCACCCCTGCTTTTCCTTGGCAAAATACGCCGGGGGGTGCGGGGGGCGGAGCCCCCCGCGGGTCGCCTCGGGCCTGCCCGAGGCGAAATCTCACCCCTCGAGCCAGTCCAGAATCATCCCTGAAAGCCCATCCGCGGCAACCTCGTGGAT  >  NC_014034/744687‑744886 Base quality scores:  ATCG  < 3 ≤  ATCG  < 12 ≤  ATCG  < 19 ≤  ATCG  < 31 ≤  ATCG  < 39 ≤  ATCG