New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 2185833 =148 (0.610)23 (0.090) 2/198 29.6 0.19 intergenic (+106/‑399) mtlK/RCAP_rcc02028 mannitol 2‑dehydrogenase/FeoA family protein
?NC_014034 = 2330174 46 (0.190)intergenic (+149/+163) RCAP_rcc02161/mrcA hypothetical protein/penicillin‑binding protein 1A
Rejected: Position hash score below cutoff.

Only 100 of 151 total aligned reads displayed.

CACCCTCCGCCCCGGAACAGGCGGCCCCGCTCCCTCCCGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGCGGGGGC.TCCG.C.CCCGCAC.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTGTTTTTGATGGCACAAGAAACGCCGAACCGCCCC  >  NC_014034/2185735‑2185934
                                                                                                  |                                                                                                         
cccccTCCGCCCCGGAACAGGCGGCCCCGCTCCCTACCGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGCgggg                                                                                                         <  1:3747252/99‑1 (MQ=255)
  cccTCCGCCCCGGAACAGGCGGCCCCGCTCCCTCCCGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGCcggggg                                                                                                       >  2:1223651/1‑100 (MQ=255)
  cccTCCGCCCCGGAACAGGCGGCCCCGCTCCCTCCCGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGCGGGGGc                                                                                                       <  1:442568/101‑1 (MQ=255)
  cccTCCGCCCCGGAACAGGCGGCCCCGCTCCCTCCCGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGCGGGGGc                                                                                                       <  2:2799235/101‑1 (MQ=255)
  cccTCCGCCCCGGAACAGGCGGCCCCGCTCCCTCCCGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGCGGGGGc                                                                                                       <  1:2120105/101‑1 (MQ=255)
   ccTCCGCCCCGGAACAGGCGGCCCCGCCCCCTCCCGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGCGGGGGC.t                                                                                                     <  1:3151248/101‑1 (MQ=255)
    cTCCGCCCCGGAACAGGCGGCCCCGCTCCCTCCCGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGCgggggggg                                                                                                     >  2:490125/1‑98 (MQ=255)
    cTCCGCCCCGGAACAGGCGGCCCCGCTCCCTCCCGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGCGGGGGC.Tc                                                                                                    >  1:4078589/1‑101 (MQ=255)
     tCCGCCCCGGAACAGGCGGCCCCGCTCCCTCCCGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGCGGGGGC.Tcc                                                                                                   <  1:3894361/101‑1 (MQ=255)
     tCCGCCCCGGAACAGGCGGCCCCGCTCCCTCCCGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGCGGGGGC.Tcc                                                                                                   <  1:989611/101‑1 (MQ=255)
     tCCGCCCCGGAACAGGCGGCCCCGCTCCCTCCCGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGCGGGGGC.Tcc                                                                                                   <  1:3362444/101‑1 (MQ=255)
     tCCGCCCCGGAACAGGCGGCCCCGCTCCCTCCCGGGCAGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGCGGGGGC.Tcc                                                                                                   <  2:4169769/101‑1 (MQ=255)
        gCCCCGGAACAGGCGGCCCCGCTCCCTCCCGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGCcgggggggggcc                                                                                                 >  1:2164628/1‑94 (MQ=255)
        gCCCCGGAACAGGCGGCCCCGCCCCCTCCCGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGCGGGGGC.TCCG.c.c                                                                                              <  1:4423112/101‑1 (MQ=255)
         ccccGGAACAGGCGGCCCCGCTCCCTCCCGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGCGGGGGC.TCCG.c.cc                                                                                             <  1:4046182/101‑1 (MQ=255)
           ccGGAACAGGCGGCCCCGCTCCCTCCCGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGCGGGGGC.TCCG.c.cccc                                                                                           <  2:1327379/101‑2 (MQ=255)
           ccGGAACAGGCGGCCCCGCTCCCTCCCGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGCGGGGGC.TCCG.c.cccc                                                                                           <  2:45824/101‑2 (MQ=255)
           ccGGAACAGGCGGCCCCGCTCCCTCCCGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGCGGGGGC.TCCG.c.cccc                                                                                           <  2:2568996/101‑2 (MQ=255)
           ccGGAACAGGCGGCCCCGCTCCCTCCCGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGCGGGGGC.TCCG.c.cccc                                                                                           <  1:2394035/101‑2 (MQ=255)
           ccGGAACAGGCGGCCCCGCTCCCTCCCGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGCGGGGGC.TCCG.c.cccc                                                                                           <  2:4273354/101‑2 (MQ=255)
           ccGGAACAGGCGGCCCCGCTCCCTCCCGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGCGGGGGC.TCCG.c.cccc                                                                                           <  1:119697/101‑2 (MQ=255)
             ggAACAGGCGGCCCCGCTCCCTCCCGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGCGGGGGG.GCCC.c.cccccc                                                                                         >  2:1649273/1‑98 (MQ=255)
             ggAACAGGCGGCCCCGCGCCCTCCCGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGCGGGGGC.TCCG.c.ccccgc                                                                                         <  2:1587254/101‑4 (MQ=255)
                aCAGGCGGCCCCGCTCCCTCCCGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGCGGGGGC.TCCGCC.CCCGCAc.c                                                                                      <  1:5048947/101‑1 (MQ=255)
                 cAGGCGGCCCCGCTCCCTCCCGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGCGGGGGG.GTCG.c.ccccccgacc                                                                                     >  2:4142914/1‑94 (MQ=255)
                  aGGCGGCCCCGCTCCCTCCCGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGCGGGGGC.TCCGCC.CCCGCAc.ccc                                                                                    <  2:1221750/101‑1 (MQ=255)
                   ggcggcCCCGCTCCCTCCCGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGCGGGGGC.TCCGCC.CCCGCAc.cccc                                                                                   <  1:2621333/101‑1 (MQ=255)
                   ggcgccCCCGCCCCCTCCGGGGCGGGCCCGCCTGATGTGCAAAGCGGTTTCGCCTGGGCGGTGCCGAGGCGACCCTGCGGGGGC.TCCGCC.CCCGCAc.cccc                                                                                   <  2:3432327/101‑1 (MQ=25)
                    gcggcCCCGCTCCCTCCCGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGCGGGGGC.TCCGCC.CCCGCAc.ccccg                                                                                  <  1:3907314/101‑2 (MQ=255)
                    gcggcCCCGCCCCCTCCCGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGCGGGGGC.TCCGCC.CCCGCAc.ccccg                                                                                  <  2:4983117/101‑2 (MQ=255)
                      ggcCCCGCTCCCTCCCGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGCGGGGGC.TCCGCC.CCCGCAc.ccccggc                                                                                <  2:3206208/101‑4 (MQ=255)
                      ggcCCCGCTCCCTCCCGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGCCGGGGG.GCCG.C.CCCCCCc.cccccccc                                                                               >  2:2093032/1‑98 (MQ=255)
                        ccccGCTCCCTCCCGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGCGGGGGC.TCCGCC.CCCGCA..CCCCCGGCGt                                                                             <  1:3222093/101‑1 (MQ=255)
                        ccccGCTCCCTCCCGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGCGGGGGC.TCCGCC.CCCGCA..CCCCCGGCGt                                                                             <  2:2388224/101‑1 (MQ=255)
                          ccGGTCCCTCCCGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGCGGGGGC.TCCGCC.CCCGCA..CCCCCGGCGTAt                                                                           <  2:4036619/101‑1 (MQ=37)
                          ccGCTCCCTCCCGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGCGGGGGC.TCCGCC.CCCGCA..CCCCCGGCGTAt                                                                           <  2:3679457/101‑1 (MQ=255)
                          ccGCTCCCTCCCGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGCGGGGGC.TCCGCC.CCCGCA..CCCCCGGCGTAt                                                                           <  1:1841854/101‑1 (MQ=255)
                           cGCTCCCTCCCGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTTCGGGTGCGTCGC.C.CCCGCA..CCCCCGCCGTAtt                                                                          >  2:2462156/1‑101 (MQ=37)
                            gCTCCCTCCCGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGCGGGGGC.TCCGCC.CCCGCA..CCCCCGGCGTAttt                                                                         <  1:95148/101‑1 (MQ=255)
                            gCTCCCTCCCGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGCGGGGGC.TCCGCC.CCCGCA..CCCCCGGCGTAttt                                                                         <  1:730499/101‑1 (MQ=255)
                            gCTCCCTCCCGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGCGGGGGC.TCCGCC.CCCGCA..CCCCCGGCGTAttt                                                                         <  1:228923/101‑1 (MQ=255)
                            gCTCCCTCCCGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGCGGGGGC.TCCGCC.CCCGCA..CCCCCGGCGTAttt                                                                         <  1:3517443/101‑1 (MQ=255)
                               ccctcccGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGCGGGGGC.TCCGCC.CCCGCA..CCCCCGGCGTATTTATc                                                                      <  1:1868562/101‑1 (MQ=255)
                                ccacccGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGCGGGGGC.TCCGCC.CCCGCA..CCCCCGGCGTATTTATcc                                                                     <  1:4759399/98‑1 (MQ=25)
                                 ctcccGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGCGGGGGC.TCCG.CACCCGCA..CCCCCGGCGTATTTATccc                                                                    >  2:228241/1‑101 (MQ=255)
                                  tcccGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGCGGGGGC.TCCGCC.CCCGCA..CCCCCGGCGTATTTATCCCa                                                                   <  1:1223768/101‑1 (MQ=255)
                                  tcccGGGCGGGGCCGCATGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGCGGGGGC.TCCGCC.CCCGCA..CCCCCGGCGTATTTATCCCa                                                                   <  1:859147/101‑1 (MQ=25)
                                    ccGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGCGGGGGC.TCCGCC.CCCGCA..CCCCCGGCGTATTTATCCCAAg                                                                 <  1:46104/101‑1 (MQ=255)
                                    ccGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGCGGGGGC.TCCGCC.CCCGCA..CCCCCGGCGTATTTATCCCAAg                                                                 <  2:3021215/101‑1 (MQ=255)
                                     cgggcgggGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGCGGGGGC.TCCGCC.CCCGCA..CCCCCGGCGTATTTATCCCAAGa                                                                <  1:459671/101‑1 (MQ=255)
                                      gggcgggGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGCGGGGGC.TCCGCC.CCCGCA..CCCCCGGCGTATTTATCCCAAGaa                                                               <  1:3739960/101‑1 (MQ=255)
                                         cgggCCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGCGGGGGC.TCCGCC.CCCGCA..CCCCCGGCGTATTTATCCCAAGaaaaa                                                            <  1:2126203/101‑1 (MQ=37)
                                           gggCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGCGGGGGC.TCCGCC.CCCGCA..CCCCCGGCGTATTTATCCCAAGAAAAagc                                                          <  2:690856/101‑1 (MQ=255)
                                           gggCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGCGGGGGC.TCCGCC.CCCGCA..CCCCCGGCGTATTTATCCCAAGAAAAagc                                                          >  1:2484105/1‑101 (MQ=255)
                                           gggCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGCGGGGGC.TCCGCC.CCCGCA..CCCCCGGCGTATTTATCCCAAGAAAAagc                                                          <  1:3400001/101‑1 (MQ=255)
                                            ggCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGCGGGGGC.TCCGCC.CCCGCA..CCCCCGGCGTATTTATCCCAAGAAAAagca                                                         >  2:3292261/1‑101 (MQ=255)
                                            ggCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGCGGGGGC.TCCGCC.CCCGCA..CCCCCGGCGTATTTATCCCAAGAAAAagca                                                         <  1:3198208/101‑1 (MQ=255)
                                             gccgccTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGCGGGGGC.TCCGCC.CCCGCA..CCCCCGGCGTATTTATCCCAAGAAAAagcag                                                        <  1:1981080/101‑1 (MQ=255)
                                                gccTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGGGACCCTGCGGGGGC.TCCGCC.CCCGCA..CCCCCGGCCTATTTATCCCAAGAAAAAGCAGCgc                                                     >  1:1682943/1‑100 (MQ=25)
                                                  cTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGCCCCTGCGGGGGT.TCCG.C.CCCCGGA.CCCCCGGCGCATTTATCCCAATAAAAAGCAGCGGCt                                                   >  1:2176644/1‑101 (MQ=25)
                                                  cTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGCGGGGGC.TCCGCC.CCCGCA..CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCt                                                   <  2:1640060/101‑1 (MQ=255)
                                                  cTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGCGGGGGC.ACCG...CTCACACACCCCCGGCCTATTTATTCCAAGAAAAAGGGGCGGCt                                                   >  1:3301980/1‑101 (MQ=255)
                                                   tGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGCGGGGGC.TCCGCC.CCCGCA..CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCtt                                                  <  1:4489633/101‑1 (MQ=255)
                                                       gtgAAAGGCGGTTTCGCCCCGGCGGTGCCAAGGCGACCCTGCGGGGGC.TCCGCC.CCCGCA..CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGccc                                              <  1:4048547/101‑1 (MQ=25)
                                                        tgCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGCGGGGGC.TCCGCC.CCCGCA..CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGcccc                                             <  1:3584079/101‑1 (MQ=255)
                                                         gCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGCGGGGGC.TCCGCC.CCCGCA..CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCg                                            <  2:280206/101‑1 (MQ=255)
                                                          taaaGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGCGGGGGC.TCCGCC.CCCGCA..CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGa                                           <  2:177480/100‑1 (MQ=37)
                                                          cAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGCGGGGGC.TCCG.C.CCCCCCA.CCCCCGGCGGATTTATCCCAAGAAAAAGCAGCGGCTTGccccca                                           >  1:419643/1‑99 (MQ=37)
                                                           aaaGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGCGGGGGC.TCCGCC.CCCGCA..CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGaa                                          <  2:4553257/101‑1 (MQ=255)
                                                             aGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGCGGGGGC.TCCGCC.CCCGCA..CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTTCCCCCaaag                                        >  2:2196765/1‑99 (MQ=25)
                                                               cGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGCGGGGGC.TCCGCC.CCCGCA..CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGcc                                      <  1:4572414/101‑1 (MQ=255)
                                                                  tttCGCCTCGGCGGTGCCGAGGCGACCCTGCGGGGGC.TCCGCC.CCCGCA..CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTg                                   <  1:4643577/101‑1 (MQ=255)
                                                                  tttCGCCTCGGCGGTGCCGAGGCGACCCTGCGGGGGC.TCCGCC.CCCGCA..CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTg                                   <  1:4773584/101‑1 (MQ=255)
                                                                     cGCCTCGGCGGTGCCGAGGCGACCCTGCGGGGGC.TCCGCC.CCCGCA..CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCTAAGGCCTTGttt                                <  2:2440291/101‑1 (MQ=37)
                                                                      gCCTCGGCGGTGCCGAGGCGACCCTGCGGGGGC.TCCGCC.CCCGCA..CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTGtttt                               <  1:2871970/101‑1 (MQ=255)
                                                                       ccTCGGCGGTGCCGAGGCGACCCTGCGGGGGC.TCCGCC.CCCGCA..CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTGttttg                              <  1:1452970/101‑2 (MQ=37)
                                                                       ccTCGGCGGTGCCGAGGCGACCCTGCGGGGGC.TCCGCC.CCCGCA..CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTGttttg                              <  2:4506832/101‑2 (MQ=37)
                                                                       ccTCGGCGGTGCCGAGGCGACCCTGCGGGGGC.TCCGCC.CCCGCA..CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTGttttg                              <  1:3419891/101‑2 (MQ=37)
                                                                        cTCGGCGGTGCCGAGGCGACCCTGCGGGGGC.TCCGCC.CCCGCA..CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCCCAAGCCCTGttttgt                             >  2:4533735/1‑99 (MQ=21)
                                                                         tCGGCGGTGCCGAGGCGACCCTGCGGGGGC.TCCG.C.CCCCCCA.CCCCCCCCGAATTTACCCCAAGAAAAATCAGCGGGTTGCCCCGGAGGCCTTGtttttat                            >  2:3850357/1‑99 (MQ=25)
                                                                            gcggTGCCGAGGCGACCCTGCGGGGGC.TCCGCC.CCCGCA..CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTG.TTTTGATGGc                        <  2:581207/101‑1 (MQ=37)
                                                                              ggTGCCGAGGCGACCCTGCGGGGGC.TCCGCC.CCCGCA..CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTG.TTTTGATGCcac                      <  2:4277961/101‑1 (MQ=25)
                                                                               gTGCCGAGGCGACCCTGCGGGGGC.TCCGCC.CCCGCA..CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTG.TTTTGATGGcaca                     <  2:2665562/101‑1 (MQ=37)
                                                                                tGCCGAGGCGACCCTGCGGGGGC.TCCGCC.CCCGCA..CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTG.TTTTGATGGCACaa                    <  2:3187750/101‑1 (MQ=37)
                                                                                 gCCGAGGCGCCCCTGCGGGGGC.TCCGCC.CCCGCA..CCCCCGGCGTATTTATCCCAAGAAAAAGTAGCGGCTTGCCCCGAAGGCCTTG.TTTTGATGGCACAAg                   <  1:2084202/101‑1 (MQ=25)
                                                                                      ggCGACCCTGCGGGGGC.TCCGCC.CCCGCA..CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTG.TTTTGATGGCACAAGAAACg              <  2:2703467/101‑1 (MQ=37)
                                                                                      ggCGACCCTGCGGGGGC.TCCGCC.CCCGCA..CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTG.TTTTGATGGCACAAGAAACg              <  1:1311180/101‑1 (MQ=37)
                                                                                         gACCCTGCGGGGGC.TCCGCC.CCCGCA..CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTG.TTTTGATGGCACAAGAAACGCCg           <  1:1649405/101‑1 (MQ=37)
                                                                                         gACCCTGCGGGGGA.TACGCC.CCCGCA..CCCCCGGCGTATTTATCCCAAGGAAAAGCAGCGGCTTGCCCCGCAGGCCATG.TTTTAATGGGACCAGAAACGccc           >  1:847232/1‑100 (MQ=16)
                                                                                          aCCCTGCGGGGGC.TCCGCC.CCCGCA..CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTG.TTTTGATGGCACAAGAAACGCCGa          <  1:3169649/101‑1 (MQ=37)
                                                                                             cTGCGGGGGC.TCCGCC.CCCGCA..CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTG.TTTTGATGGCACAAGAAACGCCGAAcc       <  1:4683533/101‑1 (MQ=37)
                                                                                             cTGCGGGGGC.TCCGCC.CCCGCA..CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTG.TTTTGATGGCACAAGAAACGCCGAAcc       <  1:2506410/101‑1 (MQ=37)
                                                                                               gCGGGGGC.TCCGCC.CCCGCAC.CCCCC.GCGTATTTATCCCAAGAAAAAGCAGCAGCTTGACCCCCAAGCCCTG.TTTTGCTGGCACAAAGAAAGCGGAAACGc     >  2:3049471/1‑101 (MQ=9)
                                                                                               gCGGGGGC.TCCGCC.CCCGCA..CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTG.TTTTGATGGCACAAGAAACGCCGAACCGc     <  2:618519/101‑1 (MQ=37)
                                                                                                cGGGGGC.TCCGCC.CCCGCA..CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTG.TTTTGATGGCACAAGAAACGCCGAACCGcc    >  2:3062775/1‑101 (MQ=37)
                                                                                                cGGGGGC.TCCGCC.CCCGCA..CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTG.TTTTGATGGCACAAGAAACGCCCAACCGcc    >  2:2986263/1‑101 (MQ=25)
                                                                                                 gggggC.TCCGCC.CCCGCA..CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTG.TTTTGATGGCACAAGAAACGCCGAACCGccc   <  2:4044468/101‑1 (MQ=37)
                                                                                                  ggggC.TCCGCC.CCCGCA..CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTTCCCCCAAGGCCTTG.TTTTGATGGCACAAGAAACGCCGAACCGcccc  >  2:1962068/1‑101 (MQ=25)
                                                                                                  ggggC.TCCGCC.CCCGCA..CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTG.TTTTGATGGCACAAGAAACGCCGAACCGcccc  <  1:626703/101‑1 (MQ=37)
                                                                                                  ggggC.TCCGCC.CCCGCA..CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTG.TTTTGATGGCACAAGAAAAGCCGAACCGcccc  >  2:1354543/1‑101 (MQ=37)
                                                                                                  |                                                                                                         
CACCCTCCGCCCCGGAACAGGCGGCCCCGCTCCCTCCCGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGCGGGGGC.TCCG.C.CCCGCAC.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTGTTTTTGATGGCACAAGAAACGCCGAACCGCCCC  >  NC_014034/2185735‑2185934

Base quality scores:  ATCG  < 3 ≤  ATCG  < 15 ≤  ATCG  < 24 ≤  ATCG  < 33 ≤  ATCG  < 40 ≤  ATCG