BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	= 2185845	92 (0.390)	79 (0.330)	36/194	11.9	0.52	intergenic (+118/‑387)	mtlK/RCAP_rcc02028	mannitol 2‑dehydrogenase/FeoA family protein
*	?	NC_014034	2330182 =	52 (0.210)	79 (0.330)	36/194	11.9	0.52	intergenic (+157/+155)	RCAP_rcc02161/mrcA	hypothetical protein/penicillin‑binding protein 1A
Rejected: Position hash score below cutoff.

Only 100 of 147 total aligned reads displayed.


CCCGGAACAGGCGGCCCCGCTCCCTCCCGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGCGGGGGC.TCCG.CCCCGCAC.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTGTTTTTGATGGCACAAGAAACGCCGAACCG.CCCCTTTCACCTTGG  >  NC_014034/2185745‑2185945


 ccGGAACAGGCGGCCCCGCTCCCTCCCGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGCGGGGGC.TCCG.ccccc                                                                                                       <  1:119697/101‑2 (MQ=255)


 ccGGAACAGGCGGCCCCGCTCCCTCCCGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGCGGGGGC.TCCG.ccccc                                                                                                       <  1:3979770/101‑2 (MQ=255)


 ccGGAACAGGCGGCCCCGCTCCCTCCCGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGCGGGGGC.TCCG.ccccc                                                                                                       <  2:4273354/101‑2 (MQ=255)


 ccGGAACAGGCGGCCCCGCTCCCTCCCGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGCGGGGGC.TCCG.ccccc                                                                                                       <  1:2394035/101‑2 (MQ=255)


 ccGGAACAGGCGGCCCCGCTCCCTCCCGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGCGGGGGC.TCCG.ccccc                                                                                                       <  2:2568996/101‑2 (MQ=255)


 ccGGAACAGGCGGCCCCGCTCCCCCCCGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGCGGGGGC.TCCG.ccccc                                                                                                       <  1:242209/101‑2 (MQ=255)


  cGGAACAGGCGGCCCCGCTCCCTCCCGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGCGGGGGG.GGCG.cccccc                                                                                                      >  2:1283224/1‑99 (MQ=255)


   ggAACAGGCGGCCCCGCTCCCTCCCGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGCGGGGGG.GCCC.ccccccc                                                                                                     >  2:1649273/1‑98 (MQ=255)


       cAGGCGGCCCCGCTCCCTCCCGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGCGGGGGC.TCCGCCCCCGCAc.cc                                                                                                 <  1:4573547/101‑1 (MQ=255)


        aGGCGGCCCCGCTCCCTCCCGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGCGGGGGC.TCCGCCCCCGCAc.ccc                                                                                                <  2:4078286/101‑1 (MQ=255)


         ggcggcCCCGCTCCCTCCCGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGCGGGGGC.TCCGCCCCCGCAc.cccc                                                                                               <  1:2621333/101‑1 (MQ=255)


         ggcgccCCCGCCCCCTCCGGGGCGGGCCCGCCTGATGTGCAAAGCGGTTTCGCCTGGGCGGTGCCGAGGCGACCCTGCGGGGGC.TCCGCCCCCGCAc.cccc                                                                                               <  2:3432327/101‑1 (MQ=25)


          gcggcCCCGCTCCCTCCCGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGCGGGGGC.TCCGCCCCCGCAc.ccccg                                                                                              <  1:3907314/101‑2 (MQ=255)


            ggcCCCGCTCCCTCCCGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGCGGGGGC.TCCGCCCCCGCAc.ccccggc                                                                                            <  2:3206208/101‑4 (MQ=255)


              ccccGCTCCCTCCCGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGCGGGGGC.TCCGCCCCCGCA..CCCCCGGCGt                                                                                         <  2:2388224/101‑1 (MQ=255)


              ccccGCTCCCTCCCGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGCGGGGGC.TCCGCCCCCGCA..CCCCCGGCGt                                                                                         <  1:3222093/101‑1 (MQ=255)


                ccGCTCCCTCCCGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGCGGGGGC.TCCGCCCCCGCA..CCCCCGGCGTAt                                                                                       <  1:1841854/101‑1 (MQ=255)


                ccGCTCCCTCCCGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGCGGGGGC.TCCGCCCCCGCA..CCCCCGGCGTAt                                                                                       <  2:3679457/101‑1 (MQ=255)


                 cGCTCCCTCCCGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTTCGGGTGCGTCGC.CCCCGCA..CCCCCGCCGTAtt                                                                                      >  2:2462156/1‑101 (MQ=37)


                  gCTCCCTCCCGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGCGGGGGC.TCCGCCCCCGCA..CCCCCGGCGTAttt                                                                                     <  1:3517443/101‑1 (MQ=255)


                  gCTCCCTCCCGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGCGGGGGC.TCCGCCCCCGCA..CCCCCGGCGTAttt                                                                                     <  1:730499/101‑1 (MQ=255)


                     ccctcccGGGCGGGGCCCCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGCGGGGGC.TCCGCCCCCGCA..CCCCCGGCGTATTTATc                                                                                  <  2:4537091/101‑1 (MQ=37)


                        tcccGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGCGGGGGC.TCCGCCCCCGCA..CCCCCGGCGTATTTATCCCa                                                                               <  1:4749860/101‑1 (MQ=255)


                        tcccGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGCGGGGGC.TCCGCCCCCGCA..CCCCCGGCGTATTTATCCCa                                                                               <  1:1223768/101‑1 (MQ=255)


                        tcccGGGCGGGGCCGCATGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGCGGGGGC.TCCGCCCCCGCA..CCCCCGGCGTATTTATCCCa                                                                               <  1:859147/101‑1 (MQ=25)


                          ccGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGCGGGGGC.TCCGCCCCCGCA..CCCCCGGCGTATTTATCCCAAg                                                                             <  2:3021215/101‑1 (MQ=255)


                           cgggcgggGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGCGGGGGC.TCCGCCCCCGCA..CCCCCGGCGTATTTATCCCAAGa                                                                            <  1:459671/101‑1 (MQ=255)


                            gggcgggGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGCGGGGGC.TCCGCCCCCGCA..CCCCCGGCGTATTTATCCCAAGaa                                                                           <  1:3739960/101‑1 (MQ=255)


                               cgggGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGCGGGGGC.TCCGCCCCCGCA..CCCCCGGCGTATTTATCCCAAGaaaaa                                                                        <  1:2119488/101‑1 (MQ=255)


                               cgggCCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGCGGGGGC.TCCGCCCCCGCA..CCCCCGGCGTATTTATCCCAAGaaaaa                                                                        <  1:2126203/101‑1 (MQ=37)


                                 gggCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGCGGGGGC.TCCGCCCCCGCA..CCCCCGGCGTATTTATCCCAAGAAAAagc                                                                      <  2:690856/101‑1 (MQ=255)


                                 gggCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGCGGGGGC.TCCGCCCCCGCA..CCCCCGGCGTATTTATCCCAAGAAAAagc                                                                      <  1:3400001/101‑1 (MQ=255)


                                 gggCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGCGGGGGC.TCCGCCCCCGCA..CCCCCGGCGTATTTATCCCAAGAAAAagc                                                                      <  1:1898738/101‑1 (MQ=255)


                                 gggCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGCGGGGGC.TCCGCCCCCGCA..CCCCCGGCGTATTTATCCCAAGAAAAagc                                                                      >  1:2484105/1‑101 (MQ=255)


                                  ggCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGCGGGGGC.TCCGCCCCCGCA..CCCCCGGCGTATTTATCCCAAGAAAAagca                                                                     >  2:4759680/1‑101 (MQ=255)


                                  ggCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGCGGGGGC.TCCGCCCCCGCA..CCCCCGGCGTATTTATCCCAAGAAAAagca                                                                     <  1:3198208/101‑1 (MQ=255)


                                   gccgccTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGCGGGGGC.TCCGCCCCCGCA..CCCCCGGCGTATTTATCCCAAGAAAAagcag                                                                    <  1:1981080/101‑1 (MQ=255)


                                      gccTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGGGACCCTGCGGGGGC.TCCGCCCCCGCA..CCCCCGGCCTATTTATCCCAAGAAAAAGCAGCgc                                                                 >  1:1682943/1‑100 (MQ=25)


                                      gccTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGCGGGGGC.TCCGCCCCCGCA..CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCgg                                                                 <  2:4998861/101‑1 (MQ=255)


                                        cTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGCCCCTGCGGGGGT.TCCG.CCCCCGGA.CCCCCGGCGCATTTATCCCAATAAAAAGCAGCGGCt                                                               >  1:2176644/1‑101 (MQ=25)


                                        cTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGCGGGGGC.TCCGCCCCCGCA..CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCt                                                               <  2:1640060/101‑1 (MQ=255)


                                        cTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGCGGGGGC.ACCG..CTCACACACCCCCGGCCTATTTATTCCAAGAAAAAGGGGCGGCt                                                               >  1:3301980/1‑101 (MQ=255)


                                         tGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGCGGGGGC.TCCGCCCCCGCA..CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCtt                                                              <  1:2896300/101‑1 (MQ=255)


                                         tGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGCGGGGGC.TCCGCCCCCGCA..CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCtt                                                              <  1:4489633/101‑1 (MQ=255)


                                             gtgCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGCGGGGGC.TCCGCCCCCGCA..CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGccc                                                          <  2:1936531/101‑1 (MQ=255)


                                             gtgAAAGGCGGTTTCGCCCCGGCGGTGCCAAGGCGACCCTGCGGGGGC.TCCGCCCCCGCA..CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGccc                                                          <  1:4048547/101‑1 (MQ=25)


                                              tgCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGCGGGGGC.TCCGCCCCCGCA..CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGcccc                                                         <  2:66189/101‑1 (MQ=255)


                                              tgCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGCGGGGGC.TCCGCCCCCGCA..CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGcccc                                                         <  1:490190/101‑1 (MQ=255)


                                              tgCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGCGGGGGC.TCCGCCCCCGCA..CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGcccc                                                         <  1:3584079/101‑1 (MQ=255)


                                               gCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGCGGGGGC.TCCGCCCCCGCA..CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCg                                                        <  2:280206/101‑1 (MQ=255)


                                                cAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGCGGGGGC.TCCG.CCCCCCCA.CCCCCGGCGGATTTATCCCAAGAAAAAGCAGCGGCTTGccccca                                                       >  1:419643/1‑99 (MQ=37)


                                                 aaaGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGCGGGGGC.TCCGCCCCCGCA..CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGaa                                                      <  2:4553257/101‑1 (MQ=255)


                                                   aGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGCGGGGGC.TCCGCCCCCGCA..CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTTCCCCCaaag                                                    >  2:2196765/1‑99 (MQ=25)


                                                       gTTTCGCCTCGGCGGTGCCGAGGCGACCCTGCGGGGGC.TCCGCCCCCGCA..CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCtt                                                <  2:2980386/101‑1 (MQ=255)


                                                        tttCGCCTCGGCGGTGCCGAGGCGACCCTGCGGGGGC.TCCGCCCCCGCA..CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTg                                               <  1:4643577/101‑1 (MQ=255)


                                                        tttCGCCTCGGCGGTGCCGAGGCGACCCTGCGGGGGC.TCCGCCCCCGCA..CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTg                                               <  1:4773584/101‑1 (MQ=255)


                                                         ttCGCCTCGGCGGTGCCGAGGCGCCCCTGCGGGGGC.TCCGCCCCCGCA..CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTGt                                              <  1:2196651/101‑1 (MQ=37)


                                                           cGCCTCGGCGGTGCCGAGGCGACCCTGCGGGGGC.TCCGCCCCCGCA..CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCTAAGGCCTTGttt                                            <  2:2440291/101‑1 (MQ=37)


                                                           cGCCTCGGCGGTGCCGAGGCGACCCTGCGGGGGC.TCCGCCCCCGCA..CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTGttt                                            <  1:1283345/101‑1 (MQ=255)


                                                           cGCCTCGGCGGTGCCGAGGCGACCCTGCGGGGGC.TCCGCCCCCGCA..CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAAGCCCTGttt                                            >  2:2174925/1‑101 (MQ=25)


                                                             ccTCGGCGGTGCCGAGGCGACCCTGCGGGGGC.TCCGCCCCCGCA..CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTGttttg                                          <  2:3075115/101‑2 (MQ=37)


                                                             ccTCGGCGGTGCCGAGGCGACCCTGCGGGGGC.TCCGCCCCCGCA..CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTGttttg                                          <  2:4506832/101‑2 (MQ=37)


                                                             ccTCGGCGGTGCCGAGGCGACCCTGCGGGGGC.TCCGCCCCCGCA..CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTGttttg                                          <  1:3419891/101‑2 (MQ=37)


                                                             ccTCGGCGGTGCCGAGGCGACCCTGCGGGGGC.TCCGCCCCCGCA..CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTGttttg                                          <  1:1452970/101‑2 (MQ=37)


                                                               tCGGCGGTGCCGAGGCGACCCTGCGGGGGC.TCCG.CCCCCCCA.CCCCCCCCGAATTTACCCCAAGAAAAATCAGCGGGTTGCCCCGGAGGCCTTGtttttat                                        >  2:3850357/1‑99 (MQ=25)


                                                                  gcggTGCCGAGGCGACCCTGCGGGGGC.TCCGCCCCCGCA..CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTG.TTTTGATGGc                                    <  2:581207/101‑1 (MQ=37)


                                                                    ggTGCCGAGGCGACCCTGCGGGGGC.TCCGCCCCCGCA..CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTG.TTTTGATGCcac                                  <  2:4277961/101‑1 (MQ=25)


                                                                     gTGGCGAGGCGACCCTGCGGGGGC.TCCGCCCCCGCA..CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCCTG.TTTTGATGGcaca                                 <  1:4255052/101‑1 (MQ=25)


                                                                     gTGCCGAGGCGACCCTGCGGGGGC.TCCGCCCCCGCA..CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTG.TTTTGATGGcaca                                 <  1:900188/101‑1 (MQ=37)


                                                                         cGAGGCGACCCTGCGGGGGC.TCCGCCCCCGCA..CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTG.TTTTGATGGCACAAGaa                             >  2:2302790/1‑101 (MQ=37)


                                                                         cGAGGCGACCCTGCGGGGGC.TCCGCCCCCGCA..CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTG.TTTTGATGGCACAAGaa                             <  2:3221240/101‑1 (MQ=37)


                                                                         cGAGGCGACCCTGCGGGGGC.TCCGCCCCCGCA..CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTG.TTTTGATGGCACAAGaa                             <  2:1144203/101‑1 (MQ=37)


                                                                            ggCGACCCTGCGGGGGC.TCCGCCCCCGCA..CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTG.TTTTGATGGCACAAGAAACg                          <  2:2703467/101‑1 (MQ=37)


                                                                               gACCCTGCGGGGGC.TCCGCCCCCGCA..CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTG.TTTTGATGGCACAAGAAACGCCg                       <  1:1649405/101‑1 (MQ=37)


                                                                               gACCCTGCGGGGGA.TACGCCCCCGCA..CCCCCGGCGTATTTATCCCAAGGAAAAGCAGCGGCTTGCCCCGCAGGCCATG.TTTTAATGGGACCAGAAACGccc                       >  1:847232/1‑100 (MQ=16)


                                                                                aCCCTGCGGGGGC.TCCGCCCCCGCA..CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTG.TTTTGATGGCACAAGAAACGCCGa                      <  1:3169649/101‑1 (MQ=37)


                                                                                  ccTGCGGGGGC.TCCGCCCCCGCA..CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTG.TTTTGATGGCACAAGAAACGCCGAAc                    <  1:4624130/101‑1 (MQ=37)


                                                                                  ccTGCGGGGGC.TACGCCCCCGCA..CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTG.TTTTGATGGCACAAGAAACGCCGAAc                    <  2:3038815/101‑1 (MQ=37)


                                                                                   cTGCGGGGGC.TCCGCCCCCGCA..CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTG.TTTTGATGGCACAAGAAACGCCGAAcc                   <  1:2620239/101‑1 (MQ=37)


                                                                                   cTGCGGGGGC.TCCGCCCCCGCA..CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTG.TTTTGATGGCACAAGAAACGCCGAAcc                   <  2:1368301/101‑1 (MQ=37)


                                                                                      cGGGGGC.TCCGCCCCCGCA..CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTG.TTTTGATGGCACAAGAAACGCCGAACCG.cc               >  2:3062775/1‑101 (MQ=37)


                                                                                       gggggC.TCCGCCCCCGCA..CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTG.TTTTGATGGCACAAGAAACGCCGAACCG.ccc              <  2:4044468/101‑1 (MQ=37)


                                                                                        ggggC.TCCGCCCCCGCA..CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTTCCCCCAAGGCCTTG.TTTTGATGGCACAAGAAACGCCGAACCG.cccc             >  2:1962068/1‑101 (MQ=25)


                                                                                        ggggC.TCCGCCCCCGCA..CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTG.TTTTGATGGCACAAGAAACGCCGAACCG.cccc             <  1:626703/101‑1 (MQ=37)


                                                                                        ggggC.TCCGCCCCCGCA..CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTG.TTTTGATGGCACAAGAAAAGCCGAACCG.cccc             >  2:1354543/1‑101 (MQ=37)


                                                                                         gggC.TCCGCCCCCGCA..CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTG.TTTTGATGGCACAAGAAACGCCGAACCG.ccccc            <  2:1677436/101‑2 (MQ=37)


                                                                                         gggC.TCCGCCCCCGCA..CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTG.TTTTGATGGCACAAGAAACGCCGAACCG.ccccc            <  2:393602/101‑2 (MQ=37)


                                                                                          ggC.TCCGCCCCCGCA..CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTG.TTTTGATGGCACAAGAAAAGCCGAACCG.ccccct           >  2:2714577/1‑99 (MQ=37)


                                                                                           ggcgccgcccccGCA..CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTG.TTTTGATGGCACAAGAAACGCCGAACCG.ccccct           <  1:183810/93‑3 (MQ=37)


                                                                                           gC.TCCGCCCCCGCA..CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTG.TTTTGATGGCACAAGAAACGCCGAACCG.CCCCctt          <  2:4530431/101‑1 (MQ=37)


                                                                                           gC.TCCGCCCCCGCA..CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTG.TTTTGATGGCACAAGAAACGCCGAACCG.CCCCctt          <  1:4525240/101‑1 (MQ=37)


                                                                                           gC.TCCGCCCCCGCA..CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTG.TTTTGATGGCACAAGAAACGCCGAACCG.CCCCctt          <  1:1364705/101‑1 (MQ=37)


                                                                                           gC.TCCGCCCCCGCA..CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTG.TTTTGATGGCACAAGAAACGCCGAACCG.CCCCctt          >  2:1619715/1‑101 (MQ=37)


                                                                                            c.TCCGCCCCCGCA..CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTG.TTTTGATGGCACAAGAAACGCCGAACCG.CCCCcttt         <  1:3259981/101‑2 (MQ=37)


                                                                                            c.TCCGCCCCCGCA..CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTG.TTTTGATGGCACAAGAAACGCCGAACCG.CCCCcttt         <  2:4879063/101‑2 (MQ=37)


                                                                                            c.TCCGCCCCCGCA..CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTG.TTTTGATGGCACAAGAAACGCCGAACCG.CCCCcttt         >  2:3924689/1‑100 (MQ=37)


                                                                                              tccgcccccGCA..CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTG.TTTTGATGGCACAAGAAACGCCGAACCG.CCCCctttc        >  1:4713053/6‑99 (MQ=37)


                                                                                                cgcccccGCA..CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTG.TTTTGATGGCACAAGAAACGCCGAACCGCCCCCTTTCAc       <  2:1283000/98‑1 (MQ=38)


                                                                                                   ccccGCA..CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTG.TTTTGATGGCACAAGAAACGCCGAACCGCCCCCTTTCACCtt    <  2:1166255/101‑1 (MQ=38)


                                                                                                    cccGCA..CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTG.TTTTGATGGCACAAGAAACGCCGAACCGCCCCCTTTCACCTTg   <  1:3678633/101‑1 (MQ=38)


CCCGGAACAGGCGGCCCCGCTCCCTCCCGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGCGGGGGC.TCCG.CCCCGCAC.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTGTTTTTGATGGCACAAGAAACGCCGAACCG.CCCCTTTCACCTTGG  >  NC_014034/2185745‑2185945

Base quality scores:


ATCG

< 3 ≤


ATCG

< 18 ≤


ATCG

< 26 ≤


ATCG

< 33 ≤


ATCG

< 40 ≤


ATCG