BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	= 408473	156 (0.780)	115 (0.570)	44/164	7.6	0.60	intergenic (+91/+57)	glnA1/dapA	glutamine synthetase/dihydrodipicolinate synthase
*	?	NC_014034	= 2600949	0 (0.000)	115 (0.570)	44/164	7.6	0.60	intergenic (+11/‑130)	RCAP_rcc02424/surE	short‑chain dehydrogenase/reductase family oxidoreductase/5'‑nucleotidase SurE
Rejected: Position hash score below cutoff.

Only 100 of 205 total aligned reads displayed.


AACGTCTGAGAGGCTGGGGGCTCTGCCCCCAGACCCCCGGGATATTTGCGGCAAGATGAAGCCGATGTCCTTCATCTTGCCG.CAAATATCCCGGGGGGAGGCTT.GCTGAAAGCAAAGACGGGGG.....G.....C....CCC.CCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATCGCGGCGTCAAGCGCG  >  NC_014034/408374‑408569


 aCGTCTGAGAGGCTGGGGGCTCTGCCCCCAGACCCCCGGGATATTTGCGGCAAGATGAAGCCGATGTCCTTCATCTTGCCG.CAAATATCCCGGGGGGAGGc                                                                                                                <  1:551313/101‑1 (MQ=255)


  cGTCTGAGAGGCTGGGGGCTCTGCCCCCAGACCCCCGGGATATTTTCTGCAAGATGAAGCCGATGTCCTTCCTCTTTCCG.CAAATATCCCCGGGGGAGGCt                                                                                                               >  2:862172/1‑101 (MQ=25)


  cGTCTGAGAGGCTGGGGGCTCTGCCCCCAGACCCCCGGGATATTTGCGGCAAGATGAAGCCGATGTCCTTCATCTTGCCG.CAAATATCCCGGGGGGAGGCt                                                                                                               <  2:3293440/101‑1 (MQ=255)


   gTCTGAGAGGCTGGGGGCTCTGCCCCCAGACCCCCGGGATATTTGCGGCAAGATGAAGCCGATGTCCTTCATCTTGCCG.CAAATATCCCGGGGGGAGGCtt                                                                                                              <  2:1162020/101‑1 (MQ=255)


    tCTGAGAGGCTGGGGGGTCTGCCCCCCGACCCCCCGGGGATTTTCCGCGAAAAGAAACCGCAGTCCTTCTTCTTTCCGCCAAAAATCCCGGGGGGGgggtg                                                                                                              >  2:2532787/1‑98 (MQ=255)


    tCTGAGAGGCTGGGGGCTCTGCCCCCAGACCCCCGGGATATTTGCGGCAAGATGAAGCCGATGTCCTTCATCTTGCCG.CAAATATCCCGGGGGGAGGCTT.g                                                                                                            <  1:1468896/101‑1 (MQ=255)


      tGAGAGGCGGGGGGCTCTCCCCCCAGCCCCCGGGGATATTGGCGGCAAGATGAAGCCGATGTCCTTCATTTTGCCG.CAAATATCCCGGGGGGAGGCTT.GCt                                                                                                          <  1:214292/101‑1 (MQ=25)


       gagaGGCTGGGGGCTCTGCCCCCAGACCCCCGGGATCTTTGTGGGAAGATGAAGGCGAAGTCCCTGCTCCTGCCG.CACACATCTCCGGGGGAGGCGT.Gcgg                                                                                                         >  2:3096610/1‑99 (MQ=12)


       gagaGGCTGGGGGCTCTGCCCCCAGACCCCCGGGATATTTTCGGGAAAATGAAGCCGATGTCCTTTATTTTGCCG.CAAATATCCCGGGGGGGGGGTT.GCTg                                                                                                         >  2:4516508/1‑101 (MQ=21)


       gagaGGCTGGGGGCTCTGCCCCCAGACCCCCGGGATATTTGCGGCAAGATGAAGCCGATGTCCTTCATCTTGCCG.CAAATATCCCGGGGGGAGGCCT.GCTg                                                                                                         >  2:4755155/1‑101 (MQ=255)


        agagGCTGGGGGCTCTGCCCCCAGACCCCCGGGATATTTGCGGCAAGATGAAGCCGATGTCCTTCATCTTGCCG.CAAATATCCCGGGGGGAGGCTT.GCTGa                                                                                                        <  1:2406316/101‑1 (MQ=255)


         gagGCTGGGGGCTCTGCCCCCAGACCCCCGGGGTATTTTCGGGAAAAAGAAACCGATGTCCTTCCACTTTCCC.CCAAAAACCCCGGGGGGGGGGT.GCTgga                                                                                                       >  1:4372654/1‑99 (MQ=12)


            gtgggggcCTCCCCCCCCACCCCCCGGGGATTTTGGCGGAAAGATGAACCCGATTTCCTTCATCTTGCCT.CAATTATCCCGGGGGGAGGCTT.GCTGAAAGc                                                                                                    <  1:2575253/98‑1 (MQ=16)


             gggggggCTCTCCCCCCAGCCCCCCGGGATATTTGCGGCAAGATGAAGCCGATGTCCTTCATCTTGCCG.CAAATATCCCGGGGGGAGGCTT.GCTGAAAGCa                                                                                                   <  1:1819052/99‑1 (MQ=255)


             cTGGGGGCTCTGCCCCCAGACCCCCGGGATATTTGCGGCAAGATGAAGCCGATGTCCTTCCTCTTGCCG.CAAATATCCCGGGGGGCGGCGT.CTTGAAAACa                                                                                                   >  1:2283138/1‑101 (MQ=18)


             cTGGGGGCTCTGCCCCCAGACCCCCGGGATATTTGCGGCAAGATGAAGCCGATGTCCTTCATCTTGCCG.CAAATATCCCGGGGGGAGGCTT.GCTGAAAGCa                                                                                                   <  2:362132/101‑1 (MQ=255)


             cTGGGGGCTCTGCCCCCAGACCCCCGGGATATTTGCGGCAAGATGAAGCCGATGTCCTTCATCTTGCCG.CAAATATCCCGGGGGGAGGCTT.GCTGAAAGCa                                                                                                   >  2:885669/1‑101 (MQ=255)


              tGGGGGCTCTGCCCCCAGACCCCCGGGATATTTGCGGCAAGATGAAGCCGATGTCCTTCATCTTGCCG.CAAATATCCCGGGGGGAGGCTT.GCTGAAAGCaa                                                                                                  <  2:2694303/101‑1 (MQ=255)


              gtggggCGCTGCCCCCAGCCCCCCGGGATATTTGCAGCAAGATGAAGCCGATGTCCTTCATCTTGCCG.CAAATATCCCGGGGGGAGGCTT.GCTGAAAGCaa                                                                                                  <  2:4158396/99‑1 (MQ=255)


                 gggCTCTGCCCCCTGACCGCGGGGATATTTGCGGCAAGATGAAGCCGATGTCCTTCATCTTGCCG.CAAATATCCCGGGGGGAGGCTT.GCTGACAGCaagac                                                                                               <  2:2958095/101‑4 (MQ=21)


                 gggCTCTGCCCCCAGCCCCCCGGGATATTTGCGGCAAGATGAAGCCGATGTCCTTCATCTTGCCG.CAAATATCCCGGGGGGAGGCTT.GCTGAAAGCaagac                                                                                               <  2:2288544/101‑4 (MQ=255)


                 gggCTCTGCCCCCAGACCCCCGGGATATTTGCGGCAAGATGAAGCCGATGTCCTTCATCTTGCCG.CAAATATCCCGGGGGGAGGCTT.GCTGAAAGCaagac                                                                                               <  1:2331964/101‑4 (MQ=255)


                 gggCTCTGCCCCCAGACCCCCGGGATACTTGCGGCAAGATGAAGCCGATGTCCTTCATCTTGCCG.CAAATATCCCGGGGGGAGGCTT.GCTGAAAGCaagac                                                                                               >  1:3312949/1‑98 (MQ=255)


                  ggCTCTGCCCCCAGACCCCCGGGATATTTGCGGCAAGATGAAGCCGATGTCCTTCATCTTGCCG.CAAATATCCCGGGGGGAGGCTT.GCTGAAAGCaagacg                                                                                              >  2:3819635/1‑97 (MQ=255)


                   gCTCTGCCCCGAGACCCCCGGGATATTTGCGGCAAGATGAAGCCGATGTCCTTCATCTTGCCG.CAAATATCCCGGGGGGAGGCTT.GCTGAAAGC.AAGACgg                                                                                            <  1:611952/101‑1 (MQ=255)


                    ctctGCCCCCAGACCCCCGGGATATTTGCGGCAAGATGAAGCCGATGTCCTTCATCTTGCCG.CAAATATCCCGGGGGGAGGCTT.GCTGAAAGC.AAGACggg                                                                                           <  2:2411592/101‑1 (MQ=255)


                     tctGCCCCCAGACCCCCGGGATATTTGCGGCAAGATGAAGCCGATGTCCTTCATCTTGCCG.CAAATATCCCGGGGGGAGGCTT.GCTGAAAGC.AAGACgggg                                                                                          >  1:2033506/1‑101 (MQ=255)


                        gCCCCCAGACCCCCGGGATATTTGCGGCAAGATGAAGCCGATGTCCTTCATCTTGCCG.CAAATATCCCGGGGGGAGGCTT.GCTGAAAGC.AAGACGGGGG.....G.....c                                                                             >  2:1285939/1‑101 (MQ=255)


                        gCCCCCAGACCCCCGGGATATTTGCGGCAAGATGAAGCCGATGTCCTTCATCTTGCCG.CAAATATCCCGGGGGGAGGCTT.GCTGAAAGC.AAGACGGGGG.....G.....c                                                                             >  1:139689/1‑101 (MQ=255)


                        cccccccacccccaGGGATATTGGCGGCAAGATGCACCCGAGCTCCTCAATCTAGCCC.CAAAAATCCCGGGGGGAGGCTT.GCTGAAAGC.AAGACGGGGG.....G.....c                                                                             <  1:4618096/92‑1 (MQ=255)


                          ccccAGCCCCCCGGGATATTGGCGGCAAGATGAATCCGATGTCCTTCACCTTGCAG.CAAATGCCCCGGGGGGAGGCTT.GCTGAAAGC.AAGACGGGGG.....G.....cag                                                                           <  2:4150179/101‑3 (MQ=255)


                          ccccAGACCCCCGGGATATTTGCGGCAAGATGAAGCCGATGTCCTTCATCTTGCCG.CAAATATCCCGGGGGGAGGCTT.GCTGAAAGC.AAGACGGGGG.....G.....cag                                                                           <  2:2364537/101‑3 (MQ=255)


                           cccAGCCCCCGGGGATATTTGCGGCAAGATGAAGCCGATGTCCTTCATCTTGCCG.CAAATATCCCGGGGGGAGGCTT.GCTGAAAGC.AAGACGGGGG.....G.....caga                                                                          <  1:3587734/101‑4 (MQ=25)


                           cccAGACCCCCGGGATATTTGCGGCAAGATGAAGCCGATGTCCTTCATCTTGCCG.CAAATATCCCGGGGGGAGGCTT.GCTGAAAGC.AAGACGGGGG.....G.....caga                                                                          <  2:3693467/101‑4 (MQ=255)


                            cctcaCCCCCGGGATATTTGGGGCAAGATAAACCCCAT.CCTTTCACCTTGCCG.CAAATATCCCGGGGGGTGAATTGGCCGAAGGCCAAGAGgggggaagcg                                                                                    >  2:2386581/5‑96 (MQ=25)


                            ccAGACCCCCGGGATATTTGCGGCAAGATGAAGCCGATGTCCTTCATCTTGCCG.CAAATATCCCGGGGGGAGGCTT.GCTGAAAGC.AAGACGGGGG.....G.....cagag                                                                         <  2:3773962/101‑5 (MQ=255)


                             cAGTCCCCGGGGATATTTGCGGCAATATGAGGCCTATGTCCTTCATCTTGCCG.CAAATCTCCCGGGGGGAGGCTT.GCTGAAAGC.AAGACGGGGG.....G.....cagagc                                                                        <  1:2698121/101‑6 (MQ=25)


                             cAGACCCCCGGGATATTTGCGGCAAGATGAAGCCGATGTCCTTCATCTTGCCG.CAAATATCCCGGGGGGAGGCTT.GCTGAAAGC.AAGACGGGGG.....G.....cagagc                                                                        >  1:3866547/1‑96 (MQ=255)


                             cAGACCCCCGGGATATTTGCGGCAAGATGAAGCCGATGTCCTTCATCTTGCCG.CAAATATCCCGGGGGGAGGCTT.GCTGAAAGC.AAGACGGGGG.....G.....cagagc                                                                        >  2:3951823/1‑96 (MQ=255)


                              aggccccgGGAATATTGGCGGCAAGATGAAGCCGATGTCCTTCATCTGGCCG.CAAATACCCCGGGGGGAGGCTT.GCTGAAAGC.AAGACGGGGG.....G.....cagagcc                                                                       <  1:144812/98‑7 (MQ=255)


                              aGACCCCCGGGATATTTGCGGCAAGATGAAGCCGATGTCCTTCATCTTGCCG.CAAATATCCCGGGGGGAGGCTT.GCTGAAAGC.AAGACGGGGG.....G.....cagagcc                                                                       >  2:4922796/1‑95 (MQ=255)


                                  ccccGGGATATTTGCGGCAAAATGAAGCCGATGTCCTTCATCTTGCCG.CAAATATCCCGGGGGGAGGCTT.GCTGAAAGC.AAGACGGGGG.....G.....cagagcccccc                                                                   <  1:457530/101‑11 (MQ=25)


                                           atTTGCGGCAAGATGAAGCCGATGTCCTTCATCTTGCCG.CAAATATCCCGGGGGGAGGCTT.GCTGAAAGCAAGAAGGGGGGAAGA.G.....C....CCC.CCGCACAGGTc                                                          >  2:4385278/1‑101 (MQ=21)


                                               gCGGCAAGATGAAGCCGATGTCCTTCATCTTGCCG.CAAATATCCCGGGGGGAGGCTT.GCTGAAAGC.AAGACGGGGGGCAGAG.....C....CCC.CCGCACAGGTCGCCa                                                      <  2:803557/101‑1 (MQ=21)


                                                 ggCAAGATGAAGCCGATGTCCTTCATCTTGCCG.CAAATATCCCGGGGGGAGGCTT.GCTGAAAGC.AAGACGGGGGGCAGAG.....C....CCC.CCGCACAGGTCGCCaaa                                                    >  1:3152433/1‑101 (MQ=21)


                                                  gCAAGATGAAGCCGATGTCCTTCATCTTGCCG.CAAATATCCCGGGGGGAGGCTT.GCTGAAAGC.AAGACGGGGGGCAGAG.....C....CCC.CCGCACAGGTCGCCaaaa                                                   >  1:687007/1‑101 (MQ=21)


                                                  gCAAGATGAAGCCGATGTCCTTCATCTTGCCG.CAAATATCCCGGGGGGAGGCTT.GCTGAAAGC.AAGACGGGGGGCAGAG.....C....CCC.CCGCACAGGTCGCCaaaa                                                   >  1:4068702/1‑101 (MQ=21)


                                                   cAAGATGAAGCCGATGTCCTTCATCTTGCCG.CAAATATCCCGGGGGGAGGCTT.GCTGAAAGC.AAGACGGGGGGCAGAG.....C....CCC.CCGCACAGGTCGCCAAAAg                                                  >  2:1026386/1‑101 (MQ=21)


                                                    aaGATGAAGCCGATGTCCTTCATCTTGCCG.CAAATATCCCGGGGGGAGGCTT.GCTGAAAGC.AAGACGGGGGGCAGAG.....C....CCC.CCGCACAGGTCGCCAAAAgg                                                 >  2:4406279/1‑101 (MQ=21)


                                                    aaGATGAAGCCGATGTCCTTCATCGTGCCG.CAAATATCCCGGGGGGAGGCTT.GCTGAAAGC.AAGACGGGGGGCAGAG.....C....CCC.CCGCACAGGTCGCCAAAAgg                                                 <  1:3096848/101‑1 (MQ=21)


                                                     aGATGAAGCCGATGTCCTTCATCTTGCCG.CAAATATCCCGGGGGGAGGCTT.GCTGAAAGC.AAGACGGGGGGCAGAG.....C....CCC.CCGCACAGGTCGCCAAAAGga                                                >  1:89043/1‑101 (MQ=21)


                                                      gATGACGCCGATGTCCTCTATCTTGCGG.CAATTCTCCGGGGGGGAGGCTT.GCTGAAAGC.AAGACGGGGGGCAGAG.....C....CCC.CCGCACAGGTCGCCAAAAGgac                                               <  1:1546882/101‑1 (MQ=255)


                                                       aTGAAGCCGATGTCCTTCATCTTGCCG.CAAATATCCCGGGGGGAGGCTT.GCTGAAAGC.AAGACGGGGGGCAGAG.....C....CCC.CCGCACAGGTCGCCAAAAGgacc                                              >  1:4521635/1‑101 (MQ=21)


                                                       aTGAAGCCGATGTCCTTCATCTTGCCG.CAAATATCCCGGGGGGAGGCTT.GCTGAAAGC.AAGACGGGGGGCAGAG.....C....CCC.CCGCACAGGTCGCCAAAAGgacc                                              >  2:3384835/1‑101 (MQ=21)


                                                        tGAAGCCGATGTCCTTCATCTTGCCG.CAAATATCCCGGGGGGAGGCTT.GCTGAAAGC.AAGACGGGGGGCAGAG.....C....CCC.CCGCACAGGTCGCCAAAAGgaccg                                             >  2:2845512/1‑101 (MQ=21)


                                                          aaGCCGATGTCCTTCATCTTGCCG.CAAATATCCCGGGGGGAGGCTT.GCTGAAAGC.AAGACGGGGGGCAGAG.....C....CCC.CCGCACAGGTCGCCAAAAGgaccgac                                           >  1:1700163/1‑101 (MQ=21)


                                                          aaGCCGATGTCCTTCATCTTGCCG.CAAATATCCCGGGGGGAGGCTT.GCTGAAAGC.AAGACGGGGGGCAGAG.....C....CCC.CCGCACAGGTCGCCAAAAGgaccgac                                           <  2:3848953/101‑1 (MQ=21)


                                                           aGCCGATGTCCTTCATCTTGCCG.CAAATATCCCGGGGGGAGGCTT.GCTGAAAGC.AAGACGGGGGGCAGAG.....C....CCC.CCGCACAGGTCGCCAAAAGgaccgacc                                          <  2:3146443/101‑1 (MQ=21)


                                                             ccGATGTCCTTCATCTTGCCG.CAAATATCCCGGGGGGAGTCTT.GCTGAAAGC.AAGACGGGGGGCAGAG.....C....CCC.CCGCACAGGTCGCCAAAAGGACCGACCTc                                        <  2:4737162/101‑1 (MQ=18)


                                                             ccGATGTCCTTCATCTTGCCG.CAAATATCCCGGGGGGAGGCTT.GCTGAAAGC.AAGACGGGGGGCAGAG.....C....CCC.CCGCACAGGTCGCCAAAAGGACCGACCTc                                        <  2:4797647/101‑1 (MQ=21)


                                                             ccGATGTCCTTCATCTTGCCG.CAAATATCCCGGGGGGAGGCTT.GCTGAAAGC.AAGACGGGGGGCAGAG.....C....CCC.CCGCACAGGTCGCCAAAAGGACCGACCTc                                        <  1:4923123/101‑1 (MQ=21)


                                                             ccGATGTCCTTCATCTTGCCG.CAAATATCCCGGGGGGAGGCTT.GCTGAAAGC.AAGACGGGGGGCAGAG.....C....CCC.CCGCACAGGTCGCCAAAAGGACCGACCTc                                        >  1:900751/1‑101 (MQ=21)


                                                               gATGTCCTTCATCTTGCCG.CAAATATCCCGGGGGGAGGCTT.GCTGAAAGC.AAGACGGGGGGCAGAG.....C....CCC.CCGCACAGGTCGCCAAAAGGACCGACCTCAg                                      >  2:4634522/1‑101 (MQ=21)


                                                               gATGTCCTTCATCTTGCCG.CAAATATCCCGGGGGGAGGCTT.GCTGAAAGC.AAGACGGGGGGCAGAG.....C....CCC.CCGCACAGGTCGCCAAAAGGACCGACCTCAg                                      >  2:1882675/1‑101 (MQ=21)


                                                                aTGTCCTTCATCTTGCCG.CAAATATCCCGGGGGGAGGCTT.GCTGAAAGC.AAGACGGGGGGCAGAG.....C....CCC.CCGCACAGGTCGCCAAAAGGACCGACCTCAGa                                     <  2:2160697/101‑1 (MQ=21)


                                                                 tggccTCCATCTGGCCG.GAAAGATCCCGGGGGGAGGCCT.GCTGAAAGC.AAGACGGGGGGCAGAG.....C....CCC.CCGCACAGGTCGCCAAAAGGACCGACCTCAGAt                                    <  1:4264861/98‑1 (MQ=255)


                                                                 tGTCCTTCATCTTGCCG.CAAATATCCCGGGGGGAGGCTT.GCTGAAAGC.AAGACGGGGGGCAGAG.....C....CCC.CCGCACAGGTCGCCAAAAGGACCGACCTCAGAt                                    >  1:4592493/1‑101 (MQ=21)


                                                                  gTCCTTCATCTTGCCG.CAAATATCCCGGGGGGAGGCTT.GCTGAAAGC.AAGACGGGGGGCAGAG.....C....CCC.CCGCACAGGTCGCCAAAAGGACCGACCTCAGATc                                   >  1:4647745/1‑101 (MQ=21)


                                                                  gTCCTTCATCTTGCCG.CAAATATCCCGGGGGGAGGCTT.GCTGAAAGC.AAGACGGGGGGCAGAG.....C....CCC.CCGCACAGGTCGCCAAAAGGACCGACCTCAGATc                                   <  2:530171/101‑1 (MQ=21)


                                                                  gTCCTTCATCTTGCCG.CAAATATCCCGGGGGGAGGCTT.GCTGAAAGC.AAGACGGGGGGCAGAG.....C....CCC.CCGCACAGGTCGCCAAAAGGACCGACCTCAGATc                                   >  1:392645/1‑101 (MQ=21)


                                                                  gTCCTTCATCTTGCCG.CAAATATCCCGGGGGGAGGCTT.GCTGAAAGC.AAGACGGGGGGCAGAG.....C....CCC.CCGCACAGGTCGCCAAAAGGACCGACCTCAAATc                                   <  1:1955583/101‑1 (MQ=18)


                                                                       tCATCTTGCCG.CAAATATCCCGGGGGGAGGCTT.GCTGAAAGC.AAGACGGGGGGCAGAG.....C....CCC.CCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGccc                              <  1:2830987/101‑1 (MQ=21)


                                                                       tCATCTTGCCG.CAAATATCCCGGGGGGAGGCTT.GCTGAAAGC.AAGACGGGGGGCAGAG.....C....CCC.CCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGccc                              <  2:2033362/101‑1 (MQ=21)


                                                                       tCATCTTGCCG.CAAATATCCCGGGGGGAGGCTT.GCTGAAAGC.AAGACGGGGGGCAGAG.....C....CCC.CCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGccc                              <  2:423324/101‑1 (MQ=21)


                                                                        cATCTTGCCG.CAAATATCCCGGGGGGAGGCTT.GCTGAAAGC.AAGACGGGGGGCAGAG.....C....CCC.CCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCg                             <  2:1819533/101‑1 (MQ=21)


                                                                        cATCTTGCCG.CAAATATCCCGGGGGGAGGCTT.GCTGAAAGC.AAGACGGGGGGCAGAG.....C....CCC.CCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCg                             >  1:4676998/1‑101 (MQ=21)


                                                                        cATCTTGCCG.CAAATATCCCGGGGGGAGGCTT.GCTGAAAGC.AAGACGGGGGGCAGAG.....C....CCC.CCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCg                             <  2:3051144/101‑1 (MQ=21)


                                                                              gCCG.CAAATATCCCGGGGGGAGGCTT.GCTGAAAGC.AAGACGGGGGGCAGAG.....C....CCC.CCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCgtgt                       >  1:3461015/1‑101 (MQ=25)


                                                                                cG.CAAATATCCCGGGGGGAGGCTT.GCTGAAAGC.AAGACGGGGGGCAGAG.....C....CCC.CCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTg                     <  2:1899151/101‑1 (MQ=25)


                                                                                 g.CAAATATCCCGGGGGGAGGCTT.GCTGAAAGC.AAGACGGGGGGCAGAG.....C....CCC.CCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGc                    <  1:2919638/101‑1 (MQ=25)


                                                                                 g.CAAATATCCCGGGGGGAGGCTT.GCTGAAAGC.AAGACGGGGGGCAGAG.....C....CCC.CCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGc                    >  1:3209245/1‑101 (MQ=25)


                                                                                    aagtatCCCGGGGGGAGGCTT.GCTGAAAGC.AAGACGGGGGGCAGAG.....C....CCC.CCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCAt                  <  2:3312687/98‑1 (MQ=255)


                                                                                     aaTCTCCCGGGGGGAGGCTT.GCTGAAAGC.AAGACGGGGGGCAGAG.....C....CCC.CCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATc                 <  1:5009816/101‑1 (MQ=255)


                                                                                        atCCCGGGGGGAGGCTT.GCTGAAAGC.AAGACGGGGGGCAGAG.....C....CCC.CCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATcgcg              >  1:1790932/1‑101 (MQ=255)


                                                                                         tCCCGGGGGGAGGCTT.GCTGAAAGC.AAGACGGGGGGCAGAG.....C....CCC.CCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTTCATCgcgg             >  2:3636534/1‑101 (MQ=255)


                                                                                          cccGGGGGGAGGCTT.GCTGAAAGC.AAGACGGGGGGCAGAG.....C....CCC.CCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATCgcggc            >  2:4334244/1‑101 (MQ=255)


                                                                                           ccGGGGGGAGGCTT.GCTGAAAGC.AAGACGGGGGGCAGAG.....C....CCC.CCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATCgcggcg           <  2:1956958/101‑1 (MQ=255)


                                                                                           ccGGGGGGAGGCTT.GCTGAAAGC.AAGACGGGGGGCAGAG.....C....CCC.CCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAACCCGGCGTGTTCCATCgcggcg           >  1:3767736/1‑101 (MQ=255)


                                                                                            cGGGGGGGGGCTT.TCTGAAAGC.AAGACGGGGG.....G.....CAGAGCCCACCGCACAGGTGGCCAAAAGGACCGACCTCAGATCAGCCCCGCGCGGTGCATCgcggcgc          >  2:2488389/1‑100 (MQ=255)


                                                                                            cGGGGGGAGGCTT.GCTGAAAGC.AAGACGGGGGGCAGAG.....C....CCC.CCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATCGCGGCGt          <  1:2723770/101‑1 (MQ=255)


                                                                                            cGGGGGGAGGCTT.GCTGAAAGC.AAGACGGGGGGCAGAG.....C....CCC.CCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATCGCGGCGt          <  1:3289327/101‑1 (MQ=255)


                                                                                             ggggggAGGCTT.GCTGAAAGC.AAGACGGGGGGCAGAG.....C....CCC.CCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATAGAGGCGTc         <  2:138920/101‑1 (MQ=255)


                                                                                              gggggAGGCTT.GCTGAAAGC.AAGACGGGGGGCAGAG.....C....CCC.CCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATCGCGGCGTCa        <  1:2302057/101‑1 (MQ=255)


                                                                                              gggggAGGCTT.GCTGAAAGC.AAGACGGGGG.....GCAGAAC....CCC.CCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATCGCGGCGTCa        >  2:1649894/1‑101 (MQ=255)


                                                                                               ggggAGGCTT.GCTGAAAGC.AAGACGGGGGGCAGAG.....C....CCC.CCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATCGCGGCGTCaa       <  1:3279903/101‑1 (MQ=255)


                                                                                                 ggAGGCTT.GCTGAAAGC.AAGACGGGGGGCAGAG.....C....CCC.CCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATCGCGGCGTCAAgc     >  1:862060/1‑101 (MQ=255)


                                                                                                   aGGCTT.GCTGAAAGC.AAGACGGGGGGCAGAG.....C....CCC.CCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATCGCGGCGTCAAgcgc   >  2:4252087/1‑101 (MQ=255)


                                                                                                   aGGCTT.GCTGAAAGC.AAGACGGGGGGCAGAG.....C....CCC.CCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATCGCGGCGTCAAgcgc   >  1:4703663/1‑101 (MQ=255)


                                                                                                   aGGCTT.GCTGAAAGC.AAGACGGGGGGCAGAG.....C....CCC.CCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATCGCGGCGTCAAgcgc   <  1:1929326/101‑1 (MQ=255)


                                                                                                    ggCTT.GCTGAAAGC.AAGACGGGGGGCAGAG.....C....CCC.CCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATCGCGGCGTCAAGcgcg  >  1:4818052/1‑101 (MQ=255)


AACGTCTGAGAGGCTGGGGGCTCTGCCCCCAGACCCCCGGGATATTTGCGGCAAGATGAAGCCGATGTCCTTCATCTTGCCG.CAAATATCCCGGGGGGAGGCTT.GCTGAAAGCAAAGACGGGGG.....G.....C....CCC.CCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATCGCGGCGTCAAGCGCG  >  NC_014034/408374‑408569

Base quality scores:


ATCG

< 3 ≤


ATCG

< 15 ≤


ATCG

< 26 ≤


ATCG

< 33 ≤


ATCG

< 40 ≤


ATCG