BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	530952 =	145 (0.710)	118 (0.580)	28/166	12.3	0.62	intergenic (+30/+111)	valS/RCAP_rcc00497	valyl‑tRNA synthetase/UbiA prenyltransferase
*	?	NC_014034	= 2600949	0 (0.000)	118 (0.580)	28/166	12.3	0.62	intergenic (+11/‑130)	RCAP_rcc02424/surE	short‑chain dehydrogenase/reductase family oxidoreductase/5'‑nucleotidase SurE
Rejected: Position hash score below cutoff.

Only 100 of 173 total aligned reads displayed.


GGAAGAGGCGGCGAAGATCGGCGCGGCGCTGAAGCGTCTGGCCGAACTCGGATAAAGGAAGAA.GGGGGGC..TC.CCGCGCTTG.TCGGCTCCCCCCGGGATATTTTCGGCAAGATAAAGGCCCGGAAGCCTCCCTTTATCTTGCCGGAAATATCCCAAGGGGGTCGGGGGGTGTGAAACCCCCGCCGC  >  NC_014034/530868‑531052


 gAAGAGGCGGCGAAGATCGGCGCGGCGCTGAAGCGTCTGGCCGAACTCGGATAAAGGAAGAA.GGGGGGC..TCTGCCCCCCGC.TTCGCTCCCCCCGGGATAtt                                                                                      >  1:3766130/1‑101 (MQ=25)


 gAAGAGGCGGCGAAGATCGGCGCGGCGCTGAAGCGTCTGGCCGAACTCGGATAAAGGAAGAA.GGGGGGC..TCTGCCCCCCGC.TTCGCTCCCCCCGGGATAtt                                                                                      >  2:5008301/1‑101 (MQ=25)


   agagGCGGCGAAGATCGGCGCGGCGCTGAAGCGTCTGGCCGAACTCGGATAAAGGAAGAA.GGGGGGC..TCTGCCCCCCGC.TTCGCTCCCCCCGGGATAtttt                                                                                    <  1:4762759/101‑1 (MQ=25)


   agagGCGGCGAAGATCGGCGCGGCGCTGAAGCGTCTGGCCGAACTCGGATAAAGGAAGAA.GGGGGGC..TCTGCCCCCCGC.TTCGCTCCCCCCGGGATAtttt                                                                                    <  1:1922384/101‑1 (MQ=25)


   agagGCGGCGAAGATCGGCGCGGCGCTGAAGCGTCTGGCCGAACTCGGATAAAGGAAGAA.GGGGGGC..TCTGCCCCCCGC.TTCGCTCCCCCCGGGATAtttt                                                                                    <  1:3159928/101‑1 (MQ=25)


   agagGCGGCGAAGATCGGCGCGGCGCTGAAGCGTCTGGCCGAACTCGGATAAAGGAAGAA.GGGGGGC..TCTGCCCCCCGC.TTCGCTCCCCCCGGGATAtttt                                                                                    <  1:2533053/101‑1 (MQ=25)


    gagGCGGCGAAGATCGGCGCGGCGCTGAAGCGTCTGGCCGAACTCGGATAAAGGAAGAA.GGGGGGG..TCTGCCCCCCGC.TTCGCTCCCCCCGGGATATTTTc                                                                                   >  1:1976715/1‑101 (MQ=25)


    gagGCGGCGAAGATCGGCGCGGCGCTGAAGCGTCTGGCCGAACTCGGATAAAGGAAGAA.GGGGGGC..TCTGCCCCCCGC.TTCGCTCCCCCCGGGATATTTTc                                                                                   <  1:4655053/101‑1 (MQ=25)


        cggcgAAGATCGGCGCGGCGCTTAAGCGTCTGGCCGAACTCGGATAAAGGAAGAA.GGGGGGC..TCTGCCCCCCGC.TTCGCTCCCCCCGGGATATTTTCGGCa                                                                               <  2:3087935/101‑1 (MQ=21)


        cggcgAAGATCGGCGCGGCGCTGAAGCGTCTGGCCGAACTCGGATAAAGGAAGAA.GGGGGGC..TCTGCCCCCCGC.TTCGCTCCCCCCGGGATATTTTCGGCa                                                                               <  2:4263616/101‑1 (MQ=25)


        cggcgAAGATCGGCGCGGCGCTGAAGCGTCTGGCCGAACTCGGATAAAGGAAGAA.GGGGGGC..TCTGCCCCCCGC.TTCGCTCCCCCCGGGATATTTTCGGCa                                                                               <  2:3693257/101‑1 (MQ=25)


         ggcgAAGATCGGCGCGGCGCTGAAGCGTCTGGCCGAACTCGGATAAAGGAAGAA.GGGGGGC..TCTGCCCCCNGC.TTCGCTCCCCCCGGGATATTTTCGGCaa                                                                              >  1:1342338/1‑101 (MQ=25)


          gcgAAGATCGGCGCGGCGCTGAAGCGTCTGGCCGAACTCGGATAAAGGAAGAA.GGGGGGC..TCTGCCCCCCGC.TTCGCTCCCCCCGGGATATTTTCGGCAAg                                                                             <  2:4504757/101‑1 (MQ=25)


          gcgAAGATCGGCGCGGCGCTGAAGCGTCTGGCCGAACTCGGATAAAGGAAGAA.GGGGGGC..TCTGCCCCCCGC.TTCGCTCCCCCCGGGATATTTTCGGCAAg                                                                             >  1:3261197/1‑101 (MQ=25)


           cgAAGATCGGCGCGGCGCTGAAGCGTCTGGCCGAACTCGGATAAAGGAAGAA.GGGGGGC..TCTGCCCCCCGC.TTCGCTCCCCCCGGGATATTTTCGGCAAGa                                                                            >  2:4393362/1‑101 (MQ=21)


            gAAGATCGGCGCGGCGCTGAAGCGTCTGGCCGAACTCGGATAAAGGAAGAA.GGGGGGC..TCTGCCCCCCGC.TTCGCTCCCCCCGGGATATTTTCGGCAAGAt                                                                           >  2:3671121/1‑101 (MQ=21)


             aaGATCGGCGCGGCGCTGAAGCGTCTGGCCGAACTCGGATAAAGGAAGAA.GGGGGGC..TCTGCCCCCCGC.TTCGCTCCCCCCGGGATATTTTCGGCAAGATa                                                                          <  1:2473411/101‑1 (MQ=21)


             aaGATCGGCGCGGCGCTGAAGCGTCTGGCCGAACTCGGATAAAGGAAGAA.GGGGGGC..TCTGCCCCCCGC.TTCGCTCCCCCCGGGATATTTTCGGCAAGATa                                                                          >  2:2297351/1‑101 (MQ=21)


              aGATCGGCGCGGCGCTGAAGCGTCTGGCCGAACTCGGATAAAGGAAGAA.GGGGGGC..TCTGCCCCCCGC.TTCGCTCCCCCCGGGATATTTTCGGCAAGATaa                                                                         >  1:4450693/1‑101 (MQ=21)


              aGATCGGCGCGGCGCTGAAGCGTCTGGCCGAACTCGGATAAAGGAAGAA.GGGGGGC..TCTGCCCCCCGC.TTCGCTCCCCCCGGGATATTTTCGGCAAGATaa                                                                         >  2:4996694/1‑101 (MQ=21)


              aGATCGGCGCGGCGCTGAAGCGTCTGGCCGAACTCGGATAAAGGAAGAA.GGGGGGC..TCTGCCCCCCGC.TTCGCTCCCCCCGGGATATTTTCGGCAAGATaa                                                                         <  1:2751822/101‑1 (MQ=21)


              aGATCGGCGCGGCGCTGAAGCGTCTGGCCGAACTCGGATAAAGGAAGAA.GGGGGGC..TCTGCCCCCCGC.TTCGCTCCCCCCGGGATATTTTCGGCAAGATaa                                                                         <  1:3345145/101‑1 (MQ=21)


               gATCGGCGCGGCGCTGAAGCGTCTGGCCGAACTCGGATAAAGGAAGAA.GGGGGGC..TCTTCCCCCCGC.TTCGCTCCCCCCGGGATATTTTCGGCAAGATaaa                                                                        <  1:4169833/101‑1 (MQ=25)


               gATCGGCGCGGCGCTGAAGCGTCTGGCCGAACTCGGATAAAGGAAGAA.GGGGGGC..TCTGCCCCCCGC.TTCGCTCCCCCCGGGATATTTTCGGCAAGATaaa                                                                        <  2:1117488/101‑1 (MQ=21)


               gATCGGCGCGGCGCTGAAGCGTCTGGCCGAACTCGGATAAAGGAAGAA.GGGGGGC..TCTGCCCCCCGC.TTCGCTCCCCCCGGGATATTTTCGGCAAGATaaa                                                                        <  1:4520549/101‑1 (MQ=21)


               gATCGGCGCGGCGCTGAAGCGTCTGGCCGAACTCGGATAAAGGAAGAA.GGGGGGC..TCTGCCCCCCGC.TTCGCTCCCCCCGGGATATTTTCGGCAAGATaaa                                                                        <  2:166745/101‑1 (MQ=21)


               gATCGGCGCGGCGCTGAAGCGTCTGGCCGAACTCGGATAAAGGAAGAA.GGGGGGC..TCTGCCCCCCGC.TTCGCTCCCCCCGGGATATTTTCGGCAAGATaaa                                                                        <  2:332816/101‑1 (MQ=21)


                aTCGGCGGGGCGCTGAAGCGTCTGGCCGAACTCGGATAAAGGAAGAA.GGGGGGC..TCTGCCCCCCGC.TTCGCTCCCCCCGGGATATTTTCGGCAAGATAAAg                                                                       <  2:4321713/101‑1 (MQ=21)


                aTCGGCGCGGCGCTGAAGCGTCTGGCCGAACTCGGATAAAGGAAGAACGGGGGGC..CG.ACCCCCCGC.TTCGCCCCCCCCGCGAAATTTTCGGCAATCTAAAg                                                                       >  2:1618364/1‑101 (MQ=255)


                  cggcgcggcgCTGAAGCGTCTGGCCGAACTCGGATAAAGGAAGAA.GGGGGGC..TCTGCCCCCCGC.TTCGCTCCCCCCGGGATATTTTCGGCAAGATAAAGGc                                                                     >  2:2369888/1‑101 (MQ=21)


                   ggcgcggcgcTGAAGCGTCTGGCCGAACTCGGATAAAGGAAGAA.GGGGGGC..TCTGCCCCCCGC.TTCGCTCCCCCCGGGATATTTTCGGCAAGATAAAGGcc                                                                    >  2:2241317/1‑101 (MQ=21)


                   ggcgcggcgcTGAAGCGTCTGGCCGAACTCGGATAAAGGAAGAA.GGGGGGC..TCTGCCCCCCGC.TTCGCTCCCCCCGGGATATTTTCGGCAAGATAAAGGcc                                                                    <  2:4948805/101‑1 (MQ=21)


                   ggcgcggcgcTGAAGCGTCTGGCCGAACTCGGATAAAGGAAGAA.GGGGGGC..TCTGCCCCCCGC.TTCGCTCCCCCCGGGATATTTTCGGCAAGATAAAGGcc                                                                    >  2:228431/1‑101 (MQ=21)


                     cgcggcgcTGAAGCGTCTGGCCGAACTCGGATAAAGGAAGAA.GGGGGGC..TCTGCCCCCCGC.TTCGCTCCCCCCGGGATATTTTCGGCAAGATAAAGGCCCg                                                                  >  2:2856728/1‑101 (MQ=21)


                     cgcggcgcTGAAGCGTCTGGCCGAACTCGGATAAAGGAAGAA.GGGGGGC..TCTGCCCCCCGC.TTCGCTCCCCCCGGGATATTTTCGGCAAGATAAAGGCCCg                                                                  <  1:2990202/101‑1 (MQ=21)


                      gcggcgcTGAAGCGTCTGGCCGAACTCGGATAAAGGAAGAA.GGGGGGC..TCTGCCCCCCGC.TTCGCTCCCCCCGGGATATTTTCGGCAAGATAAAGGCCCgg                                                                 >  1:2230357/1‑101 (MQ=21)


                      gcggcgcTGAAGCGTCTGGCCGAACTCGGATAAAGGAAGAA.GGGGGGC..TCTGCCCCCCGC.TTCGCTCCCCCCGGGATATTTTCGGCAAGATAAAGGCCCgg                                                                 <  2:4873426/101‑1 (MQ=21)


                      gcggcgcTGAAGCGTCTGGCCGAACTCGGATAAAGGAAGAA.GGGGGGC..TCTGCCCCCCGC.TTCGCTCCCCCCGGGATATTTTCGGCAAGATAAAGGCCCgg                                                                 <  2:3493126/101‑1 (MQ=21)


                       cggcgcTGAAGCGTCTGGCCGAACTCGGATAAAGGAAGAA.GGGGGGC..TCTGCCCCCCGC.TTCGCTCCCCCCGGGATATTTTCGGCAAGATAAAGGCCCGGa                                                                <  1:2054517/101‑1 (MQ=21)


                       cggcgcTGAAGCGTCTGGCCGAACTCGGATAAAGGAAGAA.GGGGGGC..TCTGCCCCCCGC.TTCGCTCCCCCCGGGATATTTTCGGCAAGATAAAGGCCCGGa                                                                <  2:4381242/101‑1 (MQ=21)


                       cggcgcTGAAGCGTCTGGCCGAACTCGGATAAAGGAAGAA.GGGGGGC..TCTGCCCCCCGC.TTCGCTCCCCCCGGGATATTTTCGGCAAGATAAAGGCCCGGa                                                                <  2:3254605/101‑1 (MQ=21)


                         gcgcTGAAGCGTCTGGCCGAACTCGGATAAAGGAAGAA.GGGGGGC..TCTGCCCCCCGC.TTCGCTCCCCCCGGGATATTTTCGGCAAGATAAAGGCCCGGAAg                                                              <  2:2637143/101‑1 (MQ=21)


                            cTGAAGCGTCTGGCCGAACTCGGATAAAGGAAGAA.GGGGGGC..TCTGCCCCCCGC.TTCGCTCCCCCCGGGATATTTTCGGCAAGATAAAGGCCCGGAAGCCt                                                           <  1:3842082/101‑1 (MQ=21)


                            cTGAAGCGTCTGGCCGAACTCGGATAAAGGAAGAA.GGGGGGC..TCTGCCCCCCGC.TTCGCTCCCCCCGGGATATTTTCGGCAAGATAAAGGCCCGGAAGCCt                                                           >  2:1338080/1‑101 (MQ=21)


                             tgcaGCGTCTGGCCGAACTCGGATAAAGGAAGAA.GGGGGGC..TC.TGGCCCCCGCTTCGCTCCCCCCGGGATATTTTCGGCAAGATAAAGGCCCGGAAGcccc                                                          >  1:2889942/4‑99 (MQ=21)


                             tccgatctCTGGCCGAACTCGGATAAAGGAAGAA.GGGGGGC..TCTGCCCCCCGC.TTCGCTCCCCCCGGGATATTTTCGGCAAGATAAAGGCCCGGAAGCCTc                                                          <  1:574455/94‑1 (MQ=18)


                              gAAGCGTCTGGCCGAACTCGGATAAAGGAAGAA.GGGGGGC..TCTGCCCCCCGC.TTCGCTCCCCCCGGGATATTTTCGGCAAGATAAAGGCCCGGAAGCCTcc                                                         >  1:3962986/1‑101 (MQ=21)


                              gAAGCGTCTGGCCGAACTCGGATAAAGGAAGAA.GGGGGGC..TCTGCCCCCCGC.TTCGCTCCCCCCGGGATATTTTCGGCAAGATAAAGGCCCGGAAGCCTcc                                                         >  2:2730285/1‑101 (MQ=21)


                              gAACCGTCTGGCCGAACTCGGATAAAGGAAGAA.GGGGGGC..TCTGCCCCCCGC.TTCGCTCCCCCCGGGATATTTTCGGCAAGATAAAGGCCCGGAAGCCTcc                                                         <  2:157708/101‑1 (MQ=21)


                               aaGCGTCTGGCCGAACTCGGATAAAGGAAGAA.GGGGGGC..TCTGCCCCCCGC.TTCGCTCCCCCCGGGATATTTTCGGCAAGATAAAGGCCCGGAAGCCTccc                                                        >  2:3165145/1‑101 (MQ=21)


                               aaGCGTCTGGCCGAACTCGGATAAAGGAAGAA.GGGGGGC..TCTGCCCCCCGC.TTCGCTCCCCCCGGGATATTTTCGGCAAGATAAAGGCCCGGAAGCCTccc                                                        <  1:13334/101‑1 (MQ=21)


                               aaGCGTCTGGCCGAACTCGGATAAAGGAAGAA.GGGGGGC..TCTGCCCCCCGC.TTCGCTCCCCCCGGGATATTTTCGGCAAGATAAAGGCCCGGAAGCCTccc                                                        >  1:3545106/1‑101 (MQ=21)


                                aGCGTCTGGCCGAACTCGGATAAAGGAAGAA.GGGGGGC..TCTGCCCCCCGC.TTCGCTCCCCCCGGGATATTTTCGGCAAGATAAAGGCCCGGAAGCCTCCCt                                                       <  1:2348247/101‑1 (MQ=21)


                                aGCGTCTGGCCGAACTCGGATAAAGGAAGAA.GGGGGGC..TCTGCCCCCCGC.TTCGCTCCCCCCGGGATATTTTCGGCAAGATAAAGGCCCGGAAGCCTCCCt                                                       <  2:4904516/101‑1 (MQ=21)


                                aGCGCCTGGCCGAACTCGGAGAAAGGAAGAA.GGGGGGC..TCTGCCCCCCGC.TTCGCTCCCCCCGGGATATTTTCGGCAAGATAAAGGCCCGGAAGCCTCCCt                                                       <  2:2194969/101‑1 (MQ=18)


                                 gCGTCTGGCCGAACTCGGATAAAGGAAGAA.GGGGGGC..TCTGCCCCCCGC.TTCGCTCCCCCCGGGATATTTTCGGCAAGATAAAGGCCCGGAAGCCTCCCtt                                                      <  2:3892426/101‑1 (MQ=21)


                                 gCGTCTGGCCGAACTCGGATAAAGGAAGAA.GGGGGGC..TCTGCCCCCCGC.TTCGCTCCCCCCGGGATATTTTCGGCAAGATAAAGGCCCGGAAGCCTCCCtt                                                      <  1:3369944/101‑1 (MQ=21)


                                  cGTCTGGCCGAACTCGGATAAAGGAAGAA.GGGGGGC..TCTGCCCCCCGC.TTCGCTCCCCCCGGGATATTTTCGGCAAGATAAAGGCCCGGAAGCCTCCCttt                                                     <  2:3048289/101‑1 (MQ=21)


                                  cGTCTGGCCGAACTCGGATAAAGGAAGAA.GGGGGGC..TCTGCCCCCCGC.TTCGCTCCCCCCGGGATATTTTCGGCAAGATAAAGGCCCGGAAGCCTCCCttt                                                     <  1:3652590/101‑1 (MQ=21)


                                  cGTCTGGCCGAACTCGGATAAAGGAAGAA.GGGGGGC..TCTGCCCCCCGC.TTCGCTCCCCCCGGGATATTTTCGGCAAGATAAAGGCCCGGAAGCCTCCCttt                                                     <  1:2820211/101‑1 (MQ=21)


                                  cGTCTGGCCGAACTCGGATAAAGGAAGAA.GGGGGGC..TCTGCCCCCCGC.TTCGCTCCCCCCGGGATATTTTCGGCAAGATAAAGGCCCGGAAGCCTCCCttt                                                     <  2:2123817/101‑1 (MQ=21)


                                   gTCTGGCCGAACTCGGATAAAGGAAGAA.GGGGGGC..TCTGCCCCCCGC.TTCGCTCCCCCCGGGATATTTTCGGCAAGATAAAGGCCCGGAAGCCTCCCTTTa                                                    <  2:2522921/101‑1 (MQ=21)


                                   gTCTGGCCGAACTCGGATAAAGGAAGAA.GGGGGGC..TCTGCCCCCCGC.TTCGCTCCCCCCGGGATATTTTCGGCAAGATAAAGGCCCGGAAGCCTCCCTTTa                                                    <  1:1686499/101‑1 (MQ=21)


                                   gTCTGGCCGAACTCGGATAAAGGAAGAA.GGGGGGC..TCTGCCCCCCGC.TTCGCTCCCCCCGGGATATTTTCGGCAAGATAAAGGCCCGGAAGCCTCCCTTTa                                                    >  1:2680058/1‑101 (MQ=21)


                                   gTCTGGCCGAACTCGGATAAAGGAAGAA.GGGGGGC..TCTGCCCCCCGC.TTCGCTCCCCCCGGGATATTTTCGGCAAGATAAAGGCCCGGAAGCCTCCCTTTa                                                    >  2:1095276/1‑101 (MQ=21)


                                    tCTGTCCGAACTCGGATAAAGGAAGAA.GGGGGGC..TCTGCCCCCCGC.TTCGCTCCCCCCGGGATATTTTCGGCAAGATAAAGGCCCGGAAGCCTCCCTTTAt                                                   <  1:800631/101‑1 (MQ=21)


                                     cTGGCCGAACTCGGATAAAGGAAGAA.GGGGGGG..TCTGCCCCCCCC.TTCGCTCCCCCCCGGATATTTTTGGCAAGATAAAAGGCCCGAAGccccaaaacgga                                                  >  2:574376/1‑91 (MQ=255)


                                     cTGGCCGAACTCGGATAAAGGAAGAA.GGGGGGC..TCTGCCCCCCGC.TTCGCTCCCCCCGGGATATTTTCGGCAAGATAAAGGCCCGGAAGCCTCCCTTTATc                                                  >  2:272092/1‑101 (MQ=21)


                                     cTGGCCGAACTCGGATAAAGGAAGAA.GGGGGGC..TCTGCCCCCCGC.TTCGCTCCCCCCGGGATATTTTCGGCAAGATAAAGGCCCGGAAGCCTCCCTTTATc                                                  <  1:1224292/101‑1 (MQ=21)


                                      tGGCCGAACTCGGATAAAGGAAGAA.GGGGGGC..TCTGCCCCCCGC.TTCGCTCCCCCCGGGATATTTTCGGCAAGATAAAGGCCCGGAAGCCTCCCTTTATCt                                                 >  1:1986977/1‑101 (MQ=21)


                                       ggCCGAACTCGGATAAAGGAAGAA.GGGGGGC..TCTGCCCCCCGC.TTCGCTCCCCCCGGGATATTTTCGGCAAGATAAAGGCCCGGAAGCCTCCCTTTATCtt                                                >  1:2508529/1‑101 (MQ=21)


                                       ggCCGAACTCGGATAAAGGAAGAA.GGGGGGC..TCTGCCCCCCGC.TTCGCTCCCCCCGGGATATTTTCGGCAAGATAAAGGCCCGGAAGCCTCCCTTTATCtt                                                <  2:771961/101‑1 (MQ=21)


                                       ggCCGAACTCGGATAAAGGAAGAA.GGGGGGC..TCTGCCCCCCGC.TTCGCTCCCCCCGGGATATTTTCGGCAAGATAAAGGCCCGGAAGCCTCCCTTTATCtt                                                >  1:1038688/1‑101 (MQ=21)


                                        gCCGAACTCGGATAAAGGAAGAA.GGGGGGC..TCTGCCCCCCGC.TTCGCTCCCCCCGGGATATTTTCGGCAAGATAAAGGCCCGGAAGCCTCCCTTTATCTTg                                               <  1:416998/101‑1 (MQ=21)


                                          cGAACTCGGATAAAGGAAGAA.GGGGGGCGGTT.GCCCCCCCC.TTGCTTCCCCCCGGGGATTTTTCGGGAAGCAAAAAGCCCGGAAGCCCCCCttttgttttc                                              >  2:1412220/1‑94 (MQ=255)


                                          cGAACTCGGATAAAGGAAGAA.GGGGGGC..TCTGCCCCCCGC.TTCGCTCCCCCCGGGATATTTTCGGCAAGATAAAGGCCCGGAAGCCTCCCTTTATCTTGcc                                             >  2:1793859/1‑101 (MQ=21)


                                            aaCTCGGATAAAGGAAGAA.GGGGGGC..TCTGCCCCCCGC.TTCGCTCCCCCCGGGATATTTTCGGCAAGATAAAGGCCCGGAAGCCTCCCTTTATCTTGCCgg                                           >  1:1419286/1‑101 (MQ=21)


                                            aaCTCGGATAAAGGAAGAA.GAGGGGC..TCTGCCCCCCGC.TTCACTCCCCCCGGGATATTTTCGGCAAGATAAAGGCCCCGAAGCCTCCCTTTATCTTGCCgg                                           >  2:873917/1‑101 (MQ=16)


                                             aCTCGGATAAAGGAAGAA.GGGGGGC..TCTGCCCCCCGC.TTCGCTCCCCCCGGGATATTTTCGGCAAGATAAAGGCCCGGAAGCCTCCCTTTATCTTGCCGGa                                          >  2:196618/1‑101 (MQ=21)


                                             aCTCGGATAAAGGAAGAA.GGGGGGC..TCTGCCCCCCGC.TTCGCTCCCCCCGGGATATTTTCGGCAAGATAAAGGCCCGGAAGCCTCCCTTTATCTTGCCGGa                                          >  1:660086/1‑101 (MQ=21)


                                                cGGATAAAGGAAGAA.GGGGGGC..TCTGCCCCCCGC.TTCGCTCCCCCCGGGATATTTTCGGCAAGATAAAGGCCCGGAAGCCTCCCTTTATCTTGCCGGAAat                                       >  1:2251717/1‑101 (MQ=21)


                                                cGGATAAAGGAAGAA.GGGGGGC..TCTGCCCCCCGC.TTCGCTCCCCCCGGGATATTTTCGGCAAGATAAAGGCCCCGAAGCCTCCCTCTATCTTGCCGGAAat                                       >  2:3451660/1‑101 (MQ=18)


                                                 ggATAAAGGAAGAA.GGGGGGC..TCTGCCCCCCGC.TTCGCTCCCCCCGGGATATTTTCGGCAAGATAAAGGCCCGGAAGCCTCCCTTTATCTTGCCGGAAata                                      <  2:1329918/101‑1 (MQ=21)


                                                   aTAAGGGAAGAA.GGGGGGC..TCTGCCCCCCGC.TTCGCTCCCCCCGGGATATTTTCGGCAAGATAAAGGACCGGAAGCCTCCCTTTATCTTGCCGGAAATATc                                    >  1:4384327/1‑101 (MQ=18)


                                                   aTAAAGGAAGAA.GGGGGGC..TCTGCCCCCCGC.TTCGCTCCCCCCGGGATATTTTCGGCAAGATAAAGGCCCGGAAGCCTCCCTTTATCTTGCCGGAAATATc                                    <  1:1018053/101‑1 (MQ=21)


                                                    tAAAGGAAGAA.GGGGGGC..TCTGCCCCCCGC.TTCGCTCCCCCCGGGATATTTTCGGCAAGATAAAGGCCCGGAAGCCTCCCTTTATCTTGCCGGAAATATcc                                   <  1:1598879/101‑1 (MQ=21)


                                                                               cccccgcttcgCTCCCCCCGGGATATTTTCGGCAAGATAAAGGCCCGGAAGCCTCCCTTTATCTTGCCGGAAATATCCCAAGGGGGTGCGGGGGTGTGaaa            >  1:144915/11‑101 (MQ=25)


                                                                                ccccgctttgCTCCCCCCGGGATATTTTCGGCAAGATAAAGGCCCGGAAGCCTCCCTTTATCTTGCCGGAAATATCCCAAGGGGGTGCGGGGGTGTGAAAc           >  2:2121261/10‑101 (MQ=25)


                                                                                ccccgcttcgCTCCCCCCGGGATATTTTCGGCAAGATAAAGGCCCGGAAGCCTCCCTTTATCTTGCCGGAAATATCCCAAGGGGGTGCGGGGGTGTGAAAc           <  1:840459/92‑1 (MQ=25)


                                                                                ccccgcttcgCTCCCCCCGGGATATTTTCGGCAAGATAAAGGCCCGGAAGCCTCCCTTTATCTTGCCGGAAATATCCCAAGGGGGTGCGGGGGTGTGAAAc           >  2:2977265/10‑101 (MQ=25)


                                                                                 cccgcttcgCTCCCCCCGGGATATTTTCGGCAAGATAAAGGCCCGGAAGCCTCCCTTTATCTTGCCGGAAATATCCCAAGGGGGTGCGGGGGTGTGAAAcc          <  2:4624034/93‑1 (MQ=25)


                                                                                 cccgcttcgCTCCCCCCGGGATATTTTCGGCAAGATAAAGGCCCGGAAGCCTCCCTTTATCTTGCCGGAAATATCCCAAGGGGGTGCGGGGGTGTGAAAcc          >  1:406803/9‑101 (MQ=25)


                                                                                   cgcttcgCTCCCCCCGGGATATTTTCGGCAAGATAAAGGCCCGGAAGCCTCCCTTTATCTTGCCGGAAATATCCCAAGGGGGTGCGGGGGTGTGAAAcccc        <  2:4165368/95‑1 (MQ=25)


                                                                                    gcttcgCTCCCCCCGGGATATTTTCGGCAAGATAAAGGCCCGGAAGCCTCCCTTTATCTTGCCGGAAATATCCCAAGGGGGTGCGGGGGTGTGAAAccccc       <  1:2370052/96‑1 (MQ=25)


                                                                                       tcgCTCCCCCCGGGATATTTTCGGCAAGATAAAGGCCCGGAAGCCTCCCTTTATCTTGCCGGAAATATCCCAAGGGGGTGCGGGGGTGTGAAACCCccgcc    <  2:1010437/99‑1 (MQ=255)


                                                                                       tcgCTCCCCCCGGGATATTTTCGGCAAGATAAAGGCCCGGAAGCCTCCCTTTATCTTGCCGGAAATATCCCAAGGGGGTGCGGGGGTGTGAAACCCccgcc    <  2:1898583/99‑1 (MQ=255)


                                                                                       tcgCTCCCCCCGGGATATTTTCGGCAAGATAAAGGCCCGGAAGCCTCCCTTTATCTTGCCGGAAATATCCCAAGGGGGTGCGGGGGTGTGAAACCCccgcc    <  2:1914755/99‑1 (MQ=255)


                                                                                       tcgCTCCCCCCGGGATATTTTCGGCAAGATAAAGGCCCGGAAGCCTCCCTTTATCTTGCCGGAAATATCCCAAGGGGGTGCGGGGGTGTGAAACCCccgcc    >  1:1557874/3‑101 (MQ=255)


                                                                                         gCTCCCCCCGGGATATTTTCGGCAAGATAAAGGCCCGGAAGCCTCCCTTTATCTTGCCGGAAATATCCCAAGGGGGTGCGGGGGTGTGAAACCCccgccgc  >  2:1538310/1‑101 (MQ=255)


                                                                                         gCTCCCCCCGGGATATTTTCGGCAAGATAAAGGCCCGGAAGCCTCCCTTTATCTTGCCGGAAATATCCCAAGGGGGTGCGGGGGGGTGAAACCCccgccgc  >  1:24705/1‑101 (MQ=255)


GGAAGAGGCGGCGAAGATCGGCGCGGCGCTGAAGCGTCTGGCCGAACTCGGATAAAGGAAGAA.GGGGGGC..TC.CCGCGCTTG.TCGGCTCCCCCCGGGATATTTTCGGCAAGATAAAGGCCCGGAAGCCTCCCTTTATCTTGCCGGAAATATCCCAAGGGGGTCGGGGGGTGTGAAACCCCCGCCGC  >  NC_014034/530868‑531052

Base quality scores:


ATCG

< 3 ≤


ATCG

< 20 ≤


ATCG

< 27 ≤


ATCG

< 33 ≤


ATCG

< 40 ≤


ATCG