BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	580888 =	179 (0.800)	56 (0.250)	16/182	18.5	0.36	intergenic (+9/‑362)	RCAP_rcc00541/RCAP_rcc00542	hypothetical protein/hypothetical protein
*	?	NC_014034	2600961 =	23 (0.090)	56 (0.250)	16/182	18.5	0.36	intergenic (+23/‑118)	RCAP_rcc02424/surE	short‑chain dehydrogenase/reductase family oxidoreductase/5'‑nucleotidase SurE
Rejected: Position hash score below cutoff.

Only 100 of 200 total aligned reads displayed.


AACTGCTGGCGAAAAGCCTCGGCGTGGCGAAATCGCGGCTGACCCTGATCCGGGGGGAAACCGCGCGTGACAAGGTGTTCCGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTG.CCCCCTCTTTCG.GCTGCGCCG.AAATT.CACCCCCGGGATATTTGAGGCAAGAT.AACGGGCGCCTATCACCTTGGTGCAAATATCCG  >  NC_014034/580788‑580987


aaCTGCTGGCGAAAAGCCTCGGCGTGGCGAAATCGCGGCTGACCCTGATCCGGGGGGAAACCGCGCGTGACAAGGTGTTCCGCCTCGATTGAGGCGGCCCg                                                                                                          <  1:3106338/101‑1 (MQ=255)


aaCCGCTGGCGAAAAGCCTCGGCGTGGCGAAATCGCGGCTGACCCTGATCCGGGGGGAAACCGCGCGTGACAAGGTGTTCCGCCTCGATTGAGGCGGCCCg                                                                                                          >  1:2924701/1‑101 (MQ=255)


   tgctgGCGAAAAGCCTCGGCGTGGCGAAATCGCGGCTGACCCTGATCCGGGGGGAAACCGCGCGTGACAAGGTGTTCCGCCTCGATTGAGGCGGCCCGGGc                                                                                                       <  1:1594717/101‑1 (MQ=255)


   tgctgGCGAAAAGCCTCGGCGTGGCGAAATCGCGGCTGACCCTGATCCGGGGGGAAACCGCGCGTGACAAGGGGTTCCGCCTCGATTGAGGCGGCCCGGGc                                                                                                       >  2:1648247/1‑101 (MQ=255)


    gctgGCGAAAAGCCTCGGCGTGGCGAAATCGCGGCTGACCCTGATCCGGGGGGAAACCGCGCGTGACAAGGTGTTCCGCCTCGATTGAGGCGGCCCGGGCa                                                                                                      >  1:3874837/1‑101 (MQ=255)


      tgGCGAAAAGCCTCGGCGTGGCGAAATCGCGGCTGACCCTGATCCGGGGGGAAACCGCGCGTGACAAGGTGTTCCGCCTCGATTGAGGCGGCCCggggcgc                                                                                                    >  2:1729085/1‑97 (MQ=255)


       ggCGAAAAGCCTCGGCGTGGCGAAATCGCGGCTGACCCTGATCCGGGGGGAAACCGCGCGTGACAAGGTGTTCCGCCTCGATTGAGGCGGCCCGGGCAggg                                                                                                   <  1:743335/101‑1 (MQ=255)


          gAAAAGCCTCGGCGTGGCGAAATCGCGGCTGACCCTGATCCGGGGGGAAACCGCGCGTGACAAGGTGTTCCGCCTCGATTGAGGCGGCCCGGGCAGGGGgc                                                                                                >  2:4611126/1‑101 (MQ=255)


          gAAAAGCCTCGGCGTGGCGAAATCGCGGCTGACCCTGATCCGGGGGGAAACCGCGCGTGACAAGGTGTTCCGCCTCGATTGAGGCGGCCCGGGCAGGGGgc                                                                                                <  1:4937107/101‑1 (MQ=255)


          gAAAAGCCTCGGCGTGGCGAAATCGCGGCTGACCCTGATCCGGGGGGAAACCGCGCGTGACAAGGTGTTCCGCCTCGATTGAGGCGGCCCGGGCAGGGGgc                                                                                                <  2:18171/101‑1 (MQ=255)


           aaaaGCCTCGGCGTGGCGAAATCGCGGCTGACCCTGATCCGGGGGGAAACCGCGCGTGACAAGGTGTTCCGCCTCGATTGAGGCGGCCCGGGCAggggggg                                                                                               >  1:2977623/1‑99 (MQ=255)


            aaaGCCTCGGCGTGGCGAAATCGCGGCTGACCCTGATCCGGGGGGAAACCGCGCGTGACAAGGTGTTCCGCCTCGATTGAGGCGGCCCGGGGGggggggga                                                                                              >  2:4330084/1‑98 (MQ=255)


             aaGCCTCGGGGTGGCGAACTCGCGGCTGGCCCTGATCCGGGGGGCAACCGCGCGTGACAAGGTGTGCCGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCt                                                                                             <  2:1980025/101‑1 (MQ=255)


             aaGCCTCGGCGTGGCGAAATCGCGACTGACCCTGATCCGGGGGGAAACCGCGCGTGACAAGGTGTTCCGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCt                                                                                             <  2:3753451/101‑1 (MQ=255)


               gCCTCGGCGTGGCGAAATCGCGGCTGACCCTGATCCGGGGGGAAACCGCGCGTGACAAGGTGTTCCGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTG.c                                                                                          <  2:4383665/101‑1 (MQ=255)


               gCCTCGGCGTGGCGAAATCGCGGCTGACCCTGATCCGGGGGGAAACCGCGCGTGACAAGGTGTTCCGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTG.c                                                                                          <  1:4971929/101‑1 (MQ=255)


                  tCGGCGTGGCGAAATCGCGGCTGACCCTGATCCGGGGGGAAACCGCGCGTGACAAGGTGTTCCGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTG.cccc                                                                                       <  2:4130124/101‑1 (MQ=255)


                    ggCGTGGCGAAATCGCGGCTGACCCTGATCCGGGGGGAAACCGCGCGTGACAAGGTGTTCCGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTG.CCCCct                                                                                     <  2:4070911/101‑1 (MQ=255)


                    ggCGTGGCGAAATCGCGGCTGACCCTGATCCGGGGGGAAACCGCGCGTGACAAGGTGTTCCGCCTCGATTGAGGCGGCCCGGGC.GGGGgcggccgcgcccc                                                                                     >  1:51379/1‑91 (MQ=255)


                      cGTGGCGAAATCGCGGCTGACCCTGATCCGGGGGGAAACCGCGCGTGACAAGGTGTTCCGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTG.CCCCctct                                                                                   <  1:3766795/101‑1 (MQ=255)


                      cGTGGCGAAATCGCGGCTGACCCTGATCCGGGGGGAAACCGCGCGTGACAAGGTGTTCCGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTG.CCCCctct                                                                                   <  2:2553742/101‑1 (MQ=255)


                      cGTGGCGAAATCGCGGCTGACCCTGATCCGGGGGGAAACCGCGCGTGACAAGGTGTTCCGCCTCGATTGACGCGGCCCGGGCAGGGGGCGCTG.CCCCctct                                                                                   <  1:4494459/101‑1 (MQ=255)


                       gTGGCGAAATCGCGGCTGACCCTGATCCGGGGGGAAACCGCGCGTGACAAGGTGTTCCGCCTCGATTGAGGCGGCCCGGGCAGGGGGGGGCG.CCCCCTCtt                                                                                  >  2:3363624/1‑101 (MQ=255)


                        tGGCGAAATCGCGGCTGACCCTGATCCGGGGGGAAACCGCGCGTGACAAGGTGTTCCGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTG.CCCCCTCttt                                                                                 <  1:2488191/101‑1 (MQ=255)


                        tGGCGAAATCGCGGCTGACCCTGATCCGGGGGGAAACCGCGCGTGACAAGGTGTTCCGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTG.CCCCCTCttt                                                                                 <  1:1334876/101‑1 (MQ=255)


                        tGGCGAAATCGCGGCTGACCCTGATCCGGGGGGAAACCGCGCGTGACAAGGTGTTCCGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTG.CCCCCTCttt                                                                                 <  1:1279238/101‑1 (MQ=255)


                        tGGCGAAATCGCGGCTGACCCTGATCCGGGGGGAAACCGCGCGTGACAAGGTGTTCCGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTG.CCCCCTCttt                                                                                 <  1:1115197/101‑1 (MQ=255)


                         ggCGAAATCGCGGCTGACCCTGATCCGGGGGGAAACCGCGCGTGACAAGGTGTTCCGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTG.CCCCCTCTTTc                                                                                >  1:2378338/1‑101 (MQ=255)


                         ggCGAAATCGCGGCTGACCCTGATCCGGGGGGAAACCGCGCGTGACAAGGTGTTCCGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTG.CCCCCTCTTTc                                                                                <  1:819464/101‑1 (MQ=255)


                         ggCGAAATCGCGGCTGACCCTGATCCGGGGGGAAACCGCGCGTGACAAGGTGTTCCGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTG.CCCCCTCTTTc                                                                                <  2:4214940/101‑1 (MQ=255)


                          gCGAAATCGCGGCTGACCCTGATCCGGGGGGAACCCGCGCGTGACAAGGTGTTCCGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTG.CCCCCTCTTTCg                                                                               <  2:95951/101‑1 (MQ=255)


                          gCGAAATCGCGGCTGACCCTGATCCGGGGGGAAACCGCGCGTGACAAGGTGTTCCGCCTCGATTGAGGCGGCCCGGGCAGGGGGGGGTG.CCCCCTCTTTCg                                                                               >  2:3260359/1‑101 (MQ=255)


                               aTCGCGGCTGACCCTGATCCGGGGGGAAACCGCGCGTGACAAGGTGTTCCGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTG.CCCCCTCTTTCG.GCTgc                                                                         <  1:2189058/101‑1 (MQ=255)


                                  gcgGCTGACCCTGATCCGGGGGGAAACCGCGCGTGACAAGGTGTTCCGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTG.CCCCCTCTTTCG.GCTGCGcc                                                                      <  1:3666269/101‑1 (MQ=255)


                                   cgGCTGACCCTGATCCGGGGGGAAACCGCGCGTGACAAGGTGTTCCGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTG.CCCCCTCTTTCG.GCTGCGCCg                                                                     <  1:2273495/101‑1 (MQ=255)


                                     gCTGACCCTGATCCGGGGGGAAACCGCGCGTGACAAGGTGTTCCGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTG.CCCCCTCTTTCG.GCTGCGCCG.aa                                                                  <  1:3929198/101‑1 (MQ=255)


                                     gCTGACCCTGATCCGGGGGGAAACCGCGCGTGACAAGGTGTTCCGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTG.CCCCCTCTTTCG.GCTGCGCCG.aa                                                                  <  1:3188285/101‑1 (MQ=255)


                                      cTGACCCTGATCCGGGGGGAAACCGCGCGTGACAAGGTGTTCCGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTG.CCCCCTCTTTCG.GCTGCGCCG.aaa                                                                 <  2:3573936/101‑1 (MQ=255)


                                       tGACCCTGATCCGGGGGGAAACCGCGCGTGACAAGGTGTTCCGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTG.CCCCCTCTTTCG.GCTGCGCCG.AAAt                                                                <  2:2305927/101‑1 (MQ=255)


                                       tGACCCTGATCCGGGGGGAAACCGCGCGTGACAAGGTGTTCCGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTG.CCCCCTCTTTCG.GCTGCGCCG.AAAt                                                                <  1:987513/101‑1 (MQ=255)


                                             tGATCCGGGGGGAAACCGCGCGTGACAAGGTGTTCCGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGGTG.CCCCCTCTTTCG.GCTGCGCCG.GAATT.CAccc                                                         >  2:2796983/1‑101 (MQ=255)


                                             tGATCCGGGGGGAAACCGCGCGTGACAAGGTGTTCCGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGGCG.CCCCCTCTTTCG.GGCGCGCCC.GAATT.TAccc                                                         >  1:2129947/1‑101 (MQ=255)


                                             tGATCCGGGGGGAAACCGCGCGTGACAAGGTGTTCCGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTG.CCCCCTCTTTCG.GCTGCGCCG.AAAAT.CAccc                                                         >  2:2181754/1‑101 (MQ=255)


                                               aTCCGGGGGGAAACCGCGCGTGACAAGGTGTTCCGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTG.CCCCCTCTTTCG.GCTGCGCCG.AAATT.CAccccc                                                       <  1:4717719/101‑1 (MQ=255)


                                                tCCGGGGGGAAACCGCGCGTGACAAGGTGTTCCGCCTCGATTGAGGCGGCCCGGGCAGGGGGGGGTGCCCCCCCCTTTTGCGCGGC.CCG.AAATT.CCccccc                                                       >  1:2550763/1‑101 (MQ=255)


                                                 ccGGGGGGAAACCGCGCGTGACAAGGTGTTCCGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGTTG.CCCCCTCTTTCC.GCTGCGCCG.GAATT.TATCCCCgg                                                     >  2:455492/1‑101 (MQ=255)


                                                 ccGGGGGGAAACCGCGCGTGACAAGGTGTTCCGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTG.CCCCCTCTTTCG.GCTGCGCCG.AAATT.CACCCCCgg                                                     <  2:37716/101‑1 (MQ=255)


                                                  cGGGGGGAAACCGCGCGTGACAAGGTGTTCCGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTG.CCCCCTCTTTCG.GCTGCGCCG.AAATT.CACCCCCggg                                                    <  1:1987812/101‑1 (MQ=255)


                                                  cGGGGGGAAACCGCGCGTGACAAGGTGTTCCGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTG.CCCCCTCTTTCG.GCTGCGCCG.AAATT.CACCCCCcgg                                                    >  2:1872505/1‑101 (MQ=255)


                                                   ggggggAAACCGCGCGTGACAAGGTGTTCCGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTG.CCCCCTCTTTCG.GCTGGGCCG.AAATT.CACCCCCgggc                                                   >  2:2813870/1‑100 (MQ=255)


                                                    gggggAAACCGCGCGTGACAAGGTGTTCCGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTG.CCCCCTCTTTCG.GCTGCGCCG.AAATT.CCCCCCCGGGat                                                  >  1:2328285/1‑101 (MQ=255)


                                                    gggggAAACCGCGCGTGACAAGGTGTTCCGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTG.CCCCCTCTTTCG.GCTGCGCCG.AAATT.CACCCCCGGGat                                                  <  1:4185849/101‑1 (MQ=255)


                                                    gggggAAACCGCGCGTGACAAGGTGTTCCGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTG.CCCCCTCTTTCG.GCTGCGCCG.AAATT.CACCCCCGGGat                                                  <  2:1158932/101‑1 (MQ=255)


                                                      gggAAACCGCGCGTGACAAGGTGTTCCGCCTCGATTGAGGCGGCCCGGGGAGGGGGCGGTG.CCCCCCCTTTCG.GCTGCGCCG.CAATT.CACCCCCcggcgat                                                >  2:3044211/1‑97 (MQ=255)


                                                       ggAAACCGCGCGTGACAAGGTGTTCCGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTG.CCCCCTCTTTCG.GCTGCGCCG.AAATT.CACCCCCGGGATAtt                                               <  1:2168066/101‑1 (MQ=255)


                                                         aaaCCGCGCGTGACAAGGTGTTCCGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTG.CCCCCTCTTTCG.GCTGCGCCG.AAATT.CACCCCCGGGGTATTTg                                             >  2:2911802/1‑101 (MQ=255)


                                                         aaaCCGCGCGTGACAAGGTGTTCCGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTG.CCCCCTCTTTCG.GCTGCGCCG.AAATT.CACCCCCGGGATATTTg                                             <  2:51369/101‑1 (MQ=255)


                                                         aaaCCGCGCGTGACAAGGTGTTCCGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTG.CCCCCTCTTTCG.GCTGCGCCG.AAATT.CACCCCCGGGATATTTg                                             <  2:3685244/101‑1 (MQ=255)


                                                         aaaCCGCGCGTGACAAGGTGTTCCGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTG.CCCCCTCTTTCG.GCTGCGCCG.AAATT.CACCCCCGGGATATTTg                                             <  1:1663621/101‑1 (MQ=255)


                                                         aaaCCGAGCGTGACAAGGTGTTCCGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTG.CCCCCTCTTTCG.GCTGCGCCG.AAATT.CACCCCCGGGATATTTg                                             <  1:813723/101‑1 (MQ=255)


                                                          aaCCGCGCGTGACAAGGTGTTCCGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTG.CCCCCTCTTTCG.GCTGCGCCG.AAATT.CACCCCCGGGATATTTGa                                            <  1:2239996/101‑1 (MQ=255)


                                                          aaCCGCGCGTGACAAGGTGTTCCGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTG.CCCCCTCTTTCG.GCTGCGCCG.AAATT.CACCCCCGGGATATTTGa                                            <  1:1729215/101‑1 (MQ=255)


                                                           aCCGCGCGTGACAAGGTGTTCCGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTG.CCCCCTCTTTCG.GCTGCGCCG.AAATT.CACCCCCGGGATATTTGAg                                           >  1:1623413/1‑101 (MQ=255)


                                                            ccGCGCGTGACAAGGTGTTCCGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTG.CCCCCTCTTTCG.GCTGCGCCG.AAATT.CACCCCCGGGATATTTGAgg                                          <  2:4884916/101‑1 (MQ=255)


                                                             cgcgcgTGACAAGGTGTTCCGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTG.CCCCCTCTTTCG.GCTGCGCCG.AAATT.CACCCCCGGGATATTTGAGGc                                         <  1:1714569/101‑1 (MQ=255)


                                                              gcgcgTGACAAGGTGTTCCGCCTCGATTGAGGCGGCCCGGGCAGGGGGGGCTG.CCCCCCCTTTTC.GCTTCGCCGCAAATTACCCCCCCGGGATTTTTggga                                          >  1:1758607/1‑98 (MQ=255)


                                                                 cgTGACAAGGTGTTCCGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTG.CCCCCTCTTTCG.GCTGCGCCG.AAATT.CACCCCCGGGATATTTGAGGCAAGa                                     <  1:1424385/101‑1 (MQ=255)


                                                                 cgTGACAAGGTGTTCCGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTG.CCCCCTCTTTCG.GCTGCGCCG.AAATT.CACCCCCGGGATATTTGAGGCAAGa                                     <  1:4329401/101‑1 (MQ=255)


                                                                  gTGACAAGGTGTTCCGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTG.CCCCCTCTTTCG.GCTGCGCCG.AAATT.CACCCCCGGGATATTTGAGGCAAGAt                                    <  2:1351896/101‑1 (MQ=255)


                                                                  gTGACAAGGTGTTACGCCTCGCTTGAGGCGGCCCGGGCCGGGGGCGCTG.CCCCCTCTTTCC.GCTGAGCCG.CCATT.CCCACCAGGGCTATTTGAGGCAAGaa                                    >  2:2415237/1‑100 (MQ=25)


                                                                   tGACAAGGTGTTCCGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTG.CCCCCTCTTTTG.GCTGCGCCG.AAATT.CACCCCCCGGATATTTGAGGCAAGAT.a                                  >  1:597593/1‑101 (MQ=255)


                                                                    gACAAGGTGTTCCGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTG.CCCCCTCTTTCG.GCTGCGCCG.AAATT.CACCCCCGGGATATTTGAGGCAAGAT.aa                                 <  2:2879581/101‑1 (MQ=255)


                                                                    gACAAGGTGTTCCGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTG.CCCCCTCTTTCC.GCTGCGCCG.CAATT.CCCCCCCGCGCTATTTGTGGCaaaacaa                                  >  2:4917379/1‑96 (MQ=25)


                                                                     aCAAGGTGTTCCGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTG.CCCCCTCTTTCG.GCTGCGCCG.AAATT.CACCCCCGGGATATTTGAGGCAAGAT.aaa                                <  1:3577087/101‑2 (MQ=255)


                                                                     aCAAGGTGTTCCGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTG.CCCCCTCTTTCG.GCTGCGCCG.AAATT.CACCCCCGGGATATTTGAGGCAAGAT.aaa                                <  2:3962347/101‑2 (MQ=255)


                                                                      cAAGGTGTTCCGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTG.CCCCCTCTTTCG.GCTGCGCCC.AAATT.CACCCCCGGGATATTTGAGGCCAGAT.aaac                               >  2:4750011/1‑99 (MQ=255)


                                                                       aaGGTGTTCCGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTG.CCCCCTCTTTCG.GCTGCGCCG.AAATT.CACCCCCGGGATATTTGAGGCAAGAT.aaacg                              <  1:3469677/101‑4 (MQ=255)


                                                                               ccGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGGTG.CCCCCTCTTTCG.GCTGCGCCG.AAATT.CACCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTa                       <  1:4352044/101‑1 (MQ=255)


                                                                               ccGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTG.CCCCCTCTTTCG.GCTGCGCCG.AAATT.CACCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTa                       <  2:1468936/101‑1 (MQ=255)


                                                                                 gCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTG.CCCCCTCTTTCG.GCTGCGCCG.AAATT.CACCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTATc                     <  2:1907239/101‑1 (MQ=255)


                                                                                 gCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTG.CCCCCTCTTTCG.GCTGCGCCG.AAATT.CACCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTATc                     <  1:3403107/101‑1 (MQ=255)


                                                                                 gCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTG.CCCCCTCTTTCG.GCTGCGCCG.AAATT.CACCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTATc                     <  1:2107205/101‑1 (MQ=255)


                                                                                   cTCGATTGAGGCGGCCCGGGCAGGGGGCGCTG.CCCCCTCTTTCG.GCTGCGCCG.AAATT.CACCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTATCAc                   <  1:468551/101‑1 (MQ=255)


                                                                                     cGATTGAGGCGGCCCGGGCAGGGGGCGCTG.CCCCCTCTTTCG.GCTGCGCCG.AAATT.CACCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTATCACCt                 <  1:4762030/101‑1 (MQ=255)


                                                                                       aTTGAGGCGGCCCGGGCAGGGGTCGCTG.CCCCCTCTTTCG.GCTGCGCCG.AAATT.CACCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTATCACCTTg               <  2:4944521/101‑1 (MQ=255)


                                                                                        ttGAGGCGGCCCGGGCAGGGGGCGCTG.CCCCCTCTTTCG.GCTGCGCCG.AAATT.CACCCCCGGGATATTTGAGGCAAGATAAACGGGGGCCTATACCCTTgg              >  2:3995544/1‑101 (MQ=21)


                                                                                        ttGAGGCGGCCCGGGCAGGGGGCGCTG.CCCCCTCTTTCG.GCTGCGCCG.AAATT.CACCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTATCACCTTgg              >  1:1531128/1‑101 (MQ=255)


                                                                                         tGAGGCGGCCCGGGCAGGGGGCGCTG.CCCCCTCTTTCG.GCTGCGCCC.AAATT.CACCCCCGGGATATTTGAGGGAAGATAAACGGGGGCCTATCACCTTGGt             >  2:3806112/1‑101 (MQ=21)


                                                                                          gAGGCGGCCCGGGCAGGGGGCGCTG.CCCCCTCTTTCG.GCTGCGCCG.AAATT.CACCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTATCACCTTgggg            >  2:539348/1‑99 (MQ=255)


                                                                                          gAGGCGGCCCGGGCAGGGGGCGCTG.CCCCCTCTTTCG.GCTGCGCCG.AAATT.CACCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTATCACCTTGGTg            <  2:2675039/101‑1 (MQ=255)


                                                                                           aGGCGGCCCGGGCAGGGGGCGCTG.CCCCCTCTTTCG.GCTGCGCCG.AAATT.CACCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTATCACCTTGGTGc           >  2:832280/1‑101 (MQ=255)


                                                                                            ggcggcCCGGGCAGGGGGGGCTG.CCCCCTCTTTCG.GCTGCGCCG.AAATT.CACCCCCGGGATATTTGAGGGAACATAAACGGGCGCCTATTCCCTTTGGGCa          >  2:2142073/1‑101 (MQ=18)


                                                                                            ggcggcCCGGGCAGGGGGCGCTG.CCCCCTCTTTCG.GCTGCGCCG.AAATT.CACCCCCGGGAAGTTTGAGGCAAGATAAACGGGGGCCTATCACCTTGGTGCa          >  2:3123552/1‑101 (MQ=25)


                                                                                             gcggcCCGGGCAGGGGGGGCCG.CCCACACTTTCG.GCTGCGCCG.GCATT.CACCCCCGGGCGATTTGAGGGAAGATAAACAGGCGCCTATCACCCTCGTGcca         >  2:3226163/1‑99 (MQ=255)


                                                                                             gcggcCCGGGCAGGGGGCGCTG.CCCCCTCTTTCG.GCTGCGCCG.AAATT.CACCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTATCACCTTGGTGCaa         <  1:1830437/101‑1 (MQ=255)


                                                                                              cggcCCGGGCAGGGGGCGCTG.CCCCCTCTTTCG.GCTGCGCCG.AAATT.CACCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTATCACCTTGGTGCaaa        <  2:2475262/101‑1 (MQ=255)


                                                                                               ggcCCGGGCAGGGGGCGCTG.CCCCCTCTTTCG.GCTGCGCCG.AAATT.CACCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTATCACCTTGGTGCAAat       <  1:5022656/101‑1 (MQ=255)


                                                                                               ggcCCGGGCAGGGGGCGCTG.CCCCCTCTTTCG.GCTGCGCCG.AAATT.CACCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTATCACCTTGGTGCAAat       <  2:2709816/101‑1 (MQ=255)


                                                                                                  ccGGGCAGGGGGCGCTG.CCCCCTCTTTCG.GCTGCGCCG.AAATT.CACCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTATCACCTTGGTGCAAATATc    <  2:2862805/101‑1 (MQ=255)


                                                                                                    gggCAGGGGGCGCTG.CCCCCTCTTTCG.GCTGCGCCG.AAATT.CACCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTATCACCTTGGTGCAAATATCCg  <  2:2808298/101‑1 (MQ=255)


AACTGCTGGCGAAAAGCCTCGGCGTGGCGAAATCGCGGCTGACCCTGATCCGGGGGGAAACCGCGCGTGACAAGGTGTTCCGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTG.CCCCCTCTTTCG.GCTGCGCCG.AAATT.CACCCCCGGGATATTTGAGGCAAGAT.AACGGGCGCCTATCACCTTGGTGCAAATATCCG  >  NC_014034/580788‑580987

Base quality scores:


ATCG

< 3 ≤


ATCG

< 18 ≤


ATCG

< 27 ≤


ATCG

< 33 ≤


ATCG

< 40 ≤


ATCG