| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_014034 | = 974198 | 2 (0.010) | 6 (0.020) | 4/196 | 27.4 | 0.05 | intergenic (+78/+181) | RCAP_rcc00884/RCAP_rcc00885 | hypothetical protein/hypothetical protein |
| ? | NC_014034 | 2665718 = | 207 (0.850) | intergenic (‑131/+106) | RCAP_rcc02481/RCAP_rcc02482 | hypothetical protein/HIT family protein | |||||
| Rejected: Position hash score below cutoff. | |||||||||||
ATGTTGCCGCGCAACTCTGAACGCCGCCGGATGGCATTCAAAAGGCGCCCCCC.GGGGCGCCTTTTGTTTTCGCCACGCTGTCGCGTGGCGACCCGCCG.......TCGCCCCCCGGACCCCCCAGCGTATTT > NC_014034/974101‑974225
|
aTGTTGCCGCGCAACTCTGAACGCCGCCGGATGGCATTCAAAAGGCGCCCCCC.GGGGCGCCTTTTGTTTTCGCCACGCTGTCGCGTGGCGACccgccgggg > 2:533578/1‑98 (MQ=255)
tGCCGCGCAACTCTGAACGCCGCCGGATGGCATTCAAAAGGCGCCCCCC.GGGGCGCCTTTTGTTTTCGCCACGCTGTCGCGTGGCGACccgccggggggcg > 2:2347555/1‑94 (MQ=255)
ggCCGCCCACCTCTGACCGCCGCGGGATGGCATAAAAAAGGCCCCCCCG.GGGGCGCTTTTTGTTTTCGCCACGCTGTCGCGGGGCGACccgccggggggct < 2:4465877/100‑8 (MQ=255)
cccGCGCACCTCGGACCGCCGCCGGATGGCATTCAAAGGGCCCCCCCG.GGGGCGCTTTTTTTTTTCCCCACGCTGTCGCGGGGCGCCccgccggggggctt < 2:1907340/100‑9 (MQ=255)
gtggacagtaaaagGGCCCCCCCC.GGTGCGCTTTTTTTTTCCCCCCCGCTGCCGCGGGGCGCCCCGCCGGGGGGCTTCGCCCCCCGGACCCCCCAGCGTAt < 2:2146461/91‑1 (MQ=2)
gggcatCAAAACGCCCCCCCCGGGGGCGCTTTTTTTTTCCCCCCCGCTGCCGCGGGGCGCCCCGCCGGGGGGCTTCGCCCCCCGGACCCCCCAGCGTAttt < 2:3085283/96‑1 (MQ=2)
|
ATGTTGCCGCGCAACTCTGAACGCCGCCGGATGGCATTCAAAAGGCGCCCCCC.GGGGCGCCTTTTGTTTTCGCCACGCTGTCGCGTGGCGACCCGCCG.......TCGCCCCCCGGACCCCCCAGCGTATTT > NC_014034/974101‑974225
Base quality scores:
ATCG
< 3 ≤
ATCG
< 22 ≤
ATCG
< 30 ≤
ATCG
< 34 ≤
ATCG
< 39 ≤
ATCG
|