New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 2493986 =176 (0.800)37 (0.170) 7/176 23.5 0.16 intergenic (+34/‑208) RCAP_rcc02319/RCAP_rcc02320 hypothetical protein/hypothetical protein
?NC_014034 3011299 = 224 (0.910)intergenic (+98/+44) purK/RCAP_rcc02822 phosphoribosylaminoimidazole carboxylase ATPase subunit/lipase
Rejected: Position hash score below cutoff.

Only 100 of 203 total aligned reads displayed.

TGCCCACCCGCGCGCCGCGTCTGGCCCAGCGCCGCGGCGGGCGCGCGGCACGACAGGCCGAGTAA.GGGGGGGCGCTGCCCCCGTTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAATGGCG.AGCAGAAGGGGGGCAAGCGCCCCCT  >  NC_014034/2493888‑2494086
                                                                                                   |                                                                                                     
tGCCCCCCCGCGCGCCGCGTCTGGCCCAGCGCCGCGGCGGGCGCGCGGCACGACAGGCCGAGTAAGGGGGGGGCGCTGCCCCCCGTCCGCAAGCGGACTcc                                                                                                      <  1:1461966/101‑1 (MQ=37)
tGCCCACCCGCGCGCCGCGTCTGGCCCAGCGCCGCGGCGGGCGCGCGGCACGACAGGCCGAGTAAGGGGGGGGCGCTGCCCCCCGTCCGCAAGCGGACTcc                                                                                                      >  2:3623375/1‑101 (MQ=37)
 gCCCACCCGCGCGCCGCGTCTGGCCCAGCGCCGCGGCGGGCGCGCGGCACGACAGGCCGAGTAAGGGGGGGGCGCTGCCCCCCGTCCGCAAGCGGACTccc                                                                                                     <  1:3196226/101‑1 (MQ=37)
 ccccCCCCGCGCGCCGCGTCGGGCCCGGCGCCGGGGCGGGCGCGCGCCACGACGGGCGGAGTAAGGGGGGGGCGCTGCCCCCCGTCCGCAAGCGGACTccc                                                                                                     <  1:1734355/100‑1 (MQ=18)
    cACCCGCGCGCCGCGTCTGGCCCAGCGCCGCGGCGGGCGCGCGGCACGACAGGCCGAGTAAGGGGGGGGCGCTGCCCCCCGTCCGCAAGCGGACTcccccc                                                                                                  <  2:1610044/101‑1 (MQ=37)
     ccccGCGCGCCGCGTCTGGCCCAGCGCCGCGGCGGGCGCGCGGCACGACAGGCCGAGTAAGGGGGGGGCGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCg                                                                                                 <  2:4813126/100‑1 (MQ=25)
     aCCCGCGCGCCGCGTCTGGCCCAGCGCCGCGGCGGGCGCGCGGCACGACAGGCCGAGTAAGGGGGGGGCGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCg                                                                                                 >  2:3325306/1‑101 (MQ=37)
      cccGCGCGCCGCGTCTGGCCCAGCGCCGCGGCGGGGGCGCGGCACGACAGGCCGAGTAAGGGGGGGGGGCCGCCCCCCCGCCGCCACCGGCCTCCCCCCgg                                                                                                >  2:3421014/1‑101 (MQ=255)
       ccGCGCGCCGCGTCTGGCCCAGCGCCGCGGCGGGCGCGCGGCACGACAGGCCGAGTAAGGGGGGGGCGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCggg                                                                                               <  1:4167575/101‑1 (MQ=25)
        cgcgcgCCGCGTCTGGCCCAGCGCCGCGGCGGGCGCGCGGCACGACAGGCCGAGTAAGGGGGGGGCGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCCGGa                                                                                              >  1:4397634/1‑101 (MQ=25)
         gcgcgcCGCGTCTGGCCCAGCGCCGCGGCGGGCGCGCGGCACGACAGGCCGAGTAAGGGGGGGGCGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGat                                                                                             <  2:1406526/101‑1 (MQ=25)
          gatctcgcgTCTGGCCCAGCGCCGCGGCGGGCGCGCGGCACGACAGGCCGAGTAAGGGGGGGGCGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGata                                                                                            <  2:4665660/96‑1 (MQ=25)
          cgcgcCGCGTCTGGCCCAGCGCCGCGGCGGGCGCGCGGCACGACAGGCCGAGTAAGGGGGGGGCGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGata                                                                                            <  1:924672/101‑1 (MQ=25)
          cgcgcCGCGTCTGGCCCAGCGCCGCGGCGGGCGCGCGGCACGACAGGCCGAGTAAGGGGGGGGCGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGata                                                                                            <  1:4700062/101‑1 (MQ=25)
          cgcgcCGCGTCTGGCCCAGCGCCGCGGCGGGCGCGCGGCACGACAGGCCGAGTAAGGGGGGGGCGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGata                                                                                            <  2:310111/101‑1 (MQ=25)
           gcgcCGCGTCTGGCCCAGCGCCGCGGCGGGCGCGCGGCACGACAGGCCGAGTAAGGGGGGGGCGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGatat                                                                                           <  2:4018236/101‑1 (MQ=25)
            cgccgcGTCTGGCCCAGCGCCGCGGCGGGCGCGCGGCACGACAGGCCGAGTAAGGGGGGGGCGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATAtt                                                                                          <  1:2232567/101‑1 (MQ=25)
             gccgcGTCTGGCCCAGCGCCGCGGCGGGCGCGCGGCACGACAGGCCGAGTAAGGGGGGGGCGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATAttt                                                                                         <  1:888344/101‑1 (MQ=25)
               cgcgTCTGGCCCAGCGCCGCGGCGGGCGCGCGGCACGACAGGCCGAGTAAGGGGGGGGCGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTgc                                                                                       <  1:1601878/101‑1 (MQ=25)
               cgcgTCTGGCCCAGCGCCGCGGCGGGCGCGCGGCACGACAGGCCGAGTAAGGGGGGGGCGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTgc                                                                                       <  1:3025777/101‑1 (MQ=25)
                 cgTCTGGCCCAGCGCCGCGGCGGGCGCGCGGCACGACAGGCCGAGTAAGGGGGGGGCGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTgcag                                                                                     <  1:3841327/101‑1 (MQ=25)
                  ctCTGGCCCAGCGCCGCGGCGGGCGCGCGGCACGACAGGCCGAGTAACGGGGGGGCCCTGCCCCCCGCCCGCAAGCGGACCCCCCCCGGGGTAttttgagc                                                                                    >  2:242284/2‑96 (MQ=255)
                    cTGGCCCAGCGCCGCGGCGGGCGCGCGGCACGACAGGCCGAGTAAGGGGGGGGCGCTGCCCCCTCGCTCCCAGCGGGCTCCCCCCCGGGCATTTGCCGCaa                                                                                  >  1:4312389/1‑101 (MQ=255)
                     tGGCCCAGCGCCGCGGCGGGCGCGCGGCACGACAGGCCGAGTAAGGGGGGGGCGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAg                                                                                 <  1:1662931/101‑1 (MQ=21)
                     tGGCCCAGCGCCGCGGCGGGCGCGCGGCACGACAGGCCGAGTAAGGGGGGGGCGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAg                                                                                 <  1:3442841/101‑1 (MQ=21)
                      ggCCCAGCTCCGCGGCGGGCCCGCGTCGCGACAGGCCGAGTAAGGGGGGGGCCCTGCCCCCCGTCCGCAAGCGGACGCCCCCCGGGATATTTGCAGCAAGa                                                                                <  1:365649/101‑1 (MQ=18)
                      ggCCCAGCGCCGCGGCGGGCGCGCGGCACGACAGGCCGAGTAAGGGGGGGGCGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGa                                                                                <  2:4904555/101‑1 (MQ=21)
                        cccAGCGCCGCGGCGGGCGCGCGGCACGACAGTCCGAGTAAGGGGGGGGCGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATg                                                                              <  2:1852144/101‑1 (MQ=21)
                        cccAGCGCCGCGGCGGGCGCGCGGCACGACAGGCCGAGTAAGGGGGGGGCGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATg                                                                              <  1:2305672/101‑1 (MQ=21)
                         ccAGCGCCGCGGCGGGCGCGCGGCACGACAGGCCGAGTAAGGGGGGGGCGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGa                                                                             <  2:427891/101‑1 (MQ=21)
                          cAGCGCCGGGGCGGGCGCGCGGCACGACAGGCCGAGTAAGGGGGGGGCGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGaa                                                                            <  2:2600911/101‑1 (MQ=18)
                          cAGCGCCGCGGCGGGCGCGCGGCACGACAGGCCGAGTAAGGGGGGGGCGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGaa                                                                            <  2:3880396/101‑1 (MQ=21)
                           agggccgcGGCGGGCGCGCGGAACGACAGGCCGAGTAAGGGGGGGGCGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGaaa                                                                           <  1:3876600/98‑1 (MQ=18)
                            gcgcCGCGGCGGGCGCGCGGCACGACAGGCCGAGTAAGGGGGGGGCTCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAAc                                                                          <  2:2257445/101‑1 (MQ=18)
                            gcgcCGCGGCGGGCGCGCGGCACGACAGGCCGAGTAAGGGGGGGGCGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAAc                                                                          <  1:1815448/101‑1 (MQ=21)
                            gcgcCGCGGCGGGCGCGCGGCACGACAGGCCGAGTAAGGGGGGGGCGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAAc                                                                          >  1:2642156/1‑101 (MQ=21)
                             cgccgcGGCGGGCGCGCGGCACGACAGGCCGAGTAAGGGGGGGGCGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAAcc                                                                         >  2:2541273/1‑101 (MQ=21)
                             cgccgcGGCGGGCGCGCGGCACGACAGGCCGAGTAAGGGGGGGGCGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAAcc                                                                         >  1:1958933/1‑101 (MQ=21)
                             cgccgcGGCGGGCGCGCGGCACGACAGGCCGAGGAAGGGGGGGGCGCCGCCCCCCGCCCCCAAGCGGGCTCCCCCCCCGACAGTTGTAGCAAGAGGaaaac                                                                         >  1:4011835/1‑99 (MQ=255)
                                cgcgGCGGGCGCGCGGCACGACAGGCCGAGTAAGGGGGGGGCGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGa                                                                      <  2:1905861/101‑1 (MQ=21)
                                  cggcggGCGCGCGGCACGACAGGCCGAGTAAGGGGGGGGCGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATg                                                                    <  2:5015862/101‑1 (MQ=21)
                                  cggcggGCGCGCGGCACGACAGGCCGAGTAAGGGGGGGGCGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATg                                                                    <  1:610261/101‑1 (MQ=21)
                                   ggcgggcgCGCGGCACGACAGGCCGAGTAAGGGGGGGGCGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTTCAGCAAGATGAAACCGGATGc                                                                   >  1:5001242/1‑101 (MQ=18)
                                   ggcgggcgCGCGGCACGACAGGCCGAGTAAGGGGGGGGCGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGc                                                                   <  1:4543829/101‑1 (MQ=21)
                                    gcgggcgCGCGGCACGACAGGCCGAGTAAGGGGGGGGCGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCCGCAAGATGAAACCGGATGcc                                                                  >  1:2245161/1‑101 (MQ=18)
                                    gcgggcgCGCGGCACGACAGGCCGAGTAAGGGGGGGGCGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGcc                                                                  <  1:1338150/101‑1 (MQ=21)
                                     cgggcgCGCGGCACGACAGGCCGAGTAAGGGGGGGGCGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCt                                                                 <  2:3568878/101‑1 (MQ=21)
                                      gggcgGGCGGCACGACAGGCCGAGTAAGGGGGGGGCGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCtt                                                                <  1:2839980/101‑1 (MQ=18)
                                      gggcgCGCGGCACGACAGGCCGAGTAAGGGGGGGGCGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCtt                                                                <  1:4471302/101‑1 (MQ=21)
                                       ggcgCGCGGCACGACAGGCCGAGTAAGGGGGGGGCGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCttt                                                               <  2:3009561/101‑1 (MQ=21)
                                        gcgcgcGGCACGACAGGCCGAGTAAGGGGGGGGCGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTc                                                              <  1:2397304/101‑1 (MQ=21)
                                        gcgcgcGGCACGACAGGCCGAGTAAGGGGGGGGCGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTc                                                              <  1:4292234/101‑1 (MQ=21)
                                         cgcgcgGCACGACAGGCCGAGTAAGGGGGGGGCGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCa                                                             <  2:2737233/101‑1 (MQ=21)
                                         cgcgcgGCACGACAGGCCGAGTAAGGGGGGGGCGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCa                                                             <  2:1562765/101‑1 (MQ=21)
                                                 aCGGCAGGCCGAGTAAGGGGGGGGCGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGccc                                                     <  1:2325626/101‑1 (MQ=18)
                                                 aCGACAGGCCGAGTAAGGGGGGGGCGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGccc                                                     <  1:1085005/101‑1 (MQ=21)
                                                 aCGACAGGCCGAGTAAGGGGGGGGCGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGccc                                                     <  1:3164033/101‑1 (MQ=21)
                                                 aCGACAGGCCGAGTAAGGGGGGGGCGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGccc                                                     <  1:739906/101‑1 (MQ=21)
                                                    aCAGGCCGAGTAAGGGGGGGGCGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGGTATTTGCAGCAAGATGAAAACGGATGCCTTTCATCTTTCCCGaa                                                  >  1:3904886/1‑101 (MQ=18)
                                                      aGGCCGAGTAAGGGGGGGGCCCTTCCCCCCCTCCGCAAGGGGGCCCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAat                                                <  2:3696304/101‑1 (MQ=21)
                                                       ggCCGAGTAAGGGGGGGGCGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAata                                               <  2:582101/101‑1 (MQ=21)
                                                          cGAGTAAGGGGGGGGCGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATcc                                            <  2:4482938/101‑1 (MQ=21)
                                                          cGAGTAAGGGGGGGGCGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATcc                                            >  1:1926281/1‑101 (MQ=18)
                                                          cGAGTAAGGGGGGGGCGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATcc                                            <  2:1492206/101‑1 (MQ=18)
                                                           taGTAAGGGGGGGGCGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATccc                                           <  2:2443922/100‑1 (MQ=18)
                                                            aGTAAGGGGGGGGCGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTTCCCGAAATATccca                                          >  1:2444096/1‑100 (MQ=18)
                                                            aGTAAGGGGGGGGCGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCg                                          <  1:4580936/101‑1 (MQ=18)
                                                             gtaaggggggggCGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCgg                                         >  1:551448/6‑101 (MQ=255)
                                                             gtaaggggggggCGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCgg                                         >  2:50858/6‑101 (MQ=255)
                                                              taaggagggggCGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCCAGATGAAACCGGGTGCCTTTCATCTTGCCCGAAATATCCCggg                                        >  1:333415/7‑101 (MQ=17)
                                                                aggggggggCGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCCGCAAGATGAAACCCGATGCCTTTCATCTTGCCCGAACTATCCCggggg                                      >  2:1216163/3‑101 (MQ=18)
                                                                aggggggggCGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCggggg                                      >  2:4782252/3‑101 (MQ=255)
                                                                aggggggggCGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCggggg                                      >  1:4942366/3‑101 (MQ=255)
                                                                    gggggCGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGa                                  <  2:560147/101‑1 (MQ=255)
                                                                     ggggCGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATTCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGaa                                 <  2:1670615/101‑1 (MQ=255)
                                                                      gggCGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAAt                                <  1:2724890/101‑1 (MQ=255)
                                                                      gggCGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCCGGCTATTTGCAGCAAGATGAAACCGGAAGCATTTCCTCTTTCCCGAAAAATCCCggggggggcat                                >  1:1162576/1‑96 (MQ=17)
                                                                       ggCGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAATg                               <  2:4312072/101‑1 (MQ=255)
                                                                        gcgcTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAATgg                              >  2:4718543/1‑101 (MQ=255)
                                                                          gcTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAATGGCg                            >  1:944133/1‑101 (MQ=255)
                                                                          gcTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAATGGCg                            >  2:2348482/1‑101 (MQ=255)
                                                                            tGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAATGGCG.aa                         >  1:2942809/1‑100 (MQ=255)
                                                                             gCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAATGGCG.aag                        >  1:4935839/1‑99 (MQ=255)
                                                                             ccccccCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAATGGCG.aag                        <  2:295632/100‑3 (MQ=255)
                                                                              cccccG.TCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAATGGCG.aagcc                      <  1:1753572/101‑5 (MQ=255)
                                                                              cccccG.TCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAATGGCG.aagcc                      <  2:1958789/101‑5 (MQ=255)
                                                                              cccccG.TCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAATGGCG.aagcc                      <  1:3490442/101‑5 (MQ=255)
                                                                                 cccgtCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAAAATCCCGGGGGGTGAATGGCG.aagccag                    >  1:2081755/5‑95 (MQ=21)
                                                                                    gtCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGCAATATCCCGGGGGGCGAATGGCG.aagccagagg                 >  2:4054418/2‑92 (MQ=18)
                                                                                     tCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAATGGCG.aagccagaggg                <  1:1113887/101‑11 (MQ=255)
                                                                                          aaGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAATGGCGAAGCCAGAGGGGGGCa            >  2:2286492/1‑101 (MQ=18)
                                                                                           aGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAATGGCGAAGCCAGAGGGGGGCag           <  2:1010559/101‑2 (MQ=18)
                                                                                           aGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAATGGCGAAGCCAGAGGGGGGCag           >  2:2861193/1‑100 (MQ=18)
                                                                                             cGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGATATATCCCGGGGGGCGAATGGCGAAGCCAGAGGGGGGCagcg         >  2:5013465/1‑98 (MQ=17)
                                                                                             cGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAATGGCGAAGCCAGAGGGGGGCaggg         >  2:2108998/1‑98 (MQ=18)
                                                                                               gACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAATGGCGAAGCCAGAGGGGGGC.AGCGcc      >  1:2912258/1‑101 (MQ=18)
                                                                                                aCTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAATGGCGAAGCCAGAGGGGGGC.AGCGccc     >  2:380330/1‑101 (MQ=18)
                                                                                                 cTCCCCCCGGGATATTTGCAGCAAGTTGAAACCGGATGCCCTTCATCTTGCCCGAAATATCCCGGGGGGTGAGTCGCGAAGCCACAGGGGGGC.AGCGcccc    >  2:1792817/1‑101 (MQ=17)
                                                                                                  tCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAATGGCGAAGCCAGAGGGGGGC.AGCGccccc   >  2:3924517/1‑101 (MQ=17)
                                                                                                   ccccccGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAATGGCGAAGCCAGAGGGGGGC.AGCGcccccc  <  2:4222518/101‑2 (MQ=17)
                                                                                                   |                                                                                                     
TGCCCACCCGCGCGCCGCGTCTGGCCCAGCGCCGCGGCGGGCGCGCGGCACGACAGGCCGAGTAA.GGGGGGGCGCTGCCCCCGTTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAATGGCG.AGCAGAAGGGGGGCAAGCGCCCCCT  >  NC_014034/2493888‑2494086

Base quality scores:  ATCG  < 3 ≤  ATCG  < 16 ≤  ATCG  < 24 ≤  ATCG  < 33 ≤  ATCG  < 40 ≤  ATCG