BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	= 1253892	34 (0.140)	58 (0.250)	15/192	19.8	0.42	intergenic (+50/+41)	RCAP_rcc01181/hisH	hypothetical protein/imidazole glycerol phosphate synthase subunit HisH
*	?	NC_014034	3276377 =	123 (0.500)	58 (0.250)	15/192	19.8	0.42	intergenic (‑129/+120)	RCAP_rcc03082/RCAP_rcc03083	lipoprotein/membrane bound YbgT‑like protein
Rejected: Position hash score below cutoff.

Only 100 of 132 total aligned reads displayed.


GTAGCAGCCTGCACGACGGGGGCAAGGGGCAATGCGGCGCAAGGCCCCCCGGGCAACC.GGCCCCCGTTTCTTCTTGGCCCAAATACGCC.GGGGGTCC.GGGGGC.GGAGCCCCC..GGCGGGTCGCCGCGCGGCCGCGC.GGC.GAAACAAAGGACCGACC.G.GGCA.GCCCCCCGGTCGGCCAGTGAACCCGAAACGC.GAAGGGACG  >  NC_014034/3276277‑3276476


gTAGCAGCCTGCACGACGGGGGCAAGGGGCAATGCGGCGCAAGGCCCCCCGGGCAACC.GGCCCCCGTTTCTTCTTGGCCCAAATACGCC.GGGGGTCC.gggg                                                                                                              <  1:4180759/101‑1 (MQ=255)


gTAGCAGCCTGCACGACGGGGGCAAGGGGCAATGCGGCGCAAGGCCCCCCGGGCAACC.GGCCCCCGTTTCTTCTTGGCCCAAATACGCC.GGGGGTCC.gggg                                                                                                              <  1:715556/101‑1 (MQ=255)


 tAGCAGCCTGCACGACGGGGGCAAGGGGCAATGCGGCGCAAGGCCCCCCGGGCAACC.GGCCCCCGTTTCTTCTTGGCCCAAATACGCC.GGGGGTCC.ggggg                                                                                                             >  2:112613/1‑101 (MQ=255)


 tAGCAGCCTGCACGACGGGGGCAAGGGGCAATGCGGCGCAAGGCCCCCCGGGCAACC.GGCCCCCGTTTCTTCTTGGCCCAAATACGCC.GGGGGTCC.ggggg                                                                                                             >  1:2711185/1‑101 (MQ=255)


  agcagcCTGCACTACGGGGGCAAGGGGCAATGCGGCGCAAGGCCCCCCGGGCAACC.GGCCCCCGTTTCTTCTTGGCCCAAATACGCC.GGGGGTCC.GGGGGc                                                                                                            <  2:3035446/101‑1 (MQ=255)


  agcagcCTGCACGACGGGGGCAAGGGGCAATGCGGCGCAAGGCCCCCCGGGCAACC.GGCCCCCGTTTCTTCTTGGCCCAAATACGCC.GGGGGTCC.GGGGGc                                                                                                            >  1:143311/1‑101 (MQ=255)


  agcagcCTGCACGACGGGGGCAAGGGGCAATGCGGCGCAAGGCCCCCCGGGCAACC.GGCCCCCGTTTCTTCTTGGCCCAAATACGCC.GGGGGTCC.GGGGGc                                                                                                            <  2:3912730/101‑1 (MQ=255)


     agcCTGCACGACGGGGGCAAGGGGCAATGCGGCGCAAGGCCCCCCGGGCAACC.GGCCCCCGTTTCTTCTTGGCCCAAATACGCC.GGGGGTCC.GGGGGC.GGa                                                                                                        <  1:3151360/101‑1 (MQ=255)


     agcCTGCACGACGGGGGCAAGGGGCAATGCGGCGCAAGGCCCCCCGGGCAACC.GGCCCCCGTTTCTTCTTGGCCCAAATACGCC.GGGGGTCC.GGGGGC.GGa                                                                                                        >  2:3515553/1‑101 (MQ=255)


        cTGCACGACGGGGGCAAGGGGCAATGCGGCGCAAGGCCCCCCGGGCAACC.GGCCCCCGTTTCTTCTTGGCCCAAATACGCC.GGGGGTCC.GGGGGC.GGAGcc                                                                                                     >  1:1304035/1‑101 (MQ=255)


        cTGCACGACGGGGGCAAGGGGCAATGCGGCGCAAGGCCCCCCGGGCAACC.GGCCCCCGTTTCTTCTTGGCCCAAATACGCC.GGGGGTCC.GGGGGC.GGAGcc                                                                                                     >  2:141806/1‑101 (MQ=255)


        cTGCACGACGGGGGCAAGGGGCAATGCGGCGCAAGGCCCCCCGGGCAACC.GGCCCCCGTTTCTTCTTGGCCCAAATACGCC.GGGGGTCC.GGGGGC.GGAGcc                                                                                                     <  1:2093162/101‑1 (MQ=255)


         tGCACGACGGGGGCAAGGGGCAATGCGGCGCAAGGCCCCCCGGGCAACC.GGCCCCCGTTTCTTCTTGGCCCAAATACGCC.GGGGGTCC.GGGGGC.GGAGccc                                                                                                    >  1:4774137/1‑101 (MQ=255)


         tGCACGACGGGGGCAAGGGGCAATGCGGCGCAAGGCCCCCCGGGCAACC.GGCCCCCGTTTCTTCTTGGCCCAAATACGCC.GGGGGTCC.GGGGGC.GGAGccc                                                                                                    >  1:531043/1‑101 (MQ=255)


         tGCACGACGGGGGCAAGGGGCAATGCGGCGCAAGGCCCCCCGGGCAACC.GGCCCCCGTTTCTTCTTGGCCCAAATACGCC.GGGGGTCC.GGGGGC.GGAGccc                                                                                                    <  2:2627001/101‑1 (MQ=255)


           cACGGCGGGGGCAGGGGGCAATGCGGCGCAAGGCCCCCCGGGCAACC.GGCCCCCGTTTCTTCTTGGCCCAAATACGCC.GGGGGTCC.GGGGGC.GGAGccccc                                                                                                  <  2:4003609/101‑1 (MQ=255)


            acgacgGGGGCAAGGGGCAATGCGGCGCAAGGCCCCCCGGGCAACC.GGCCCCCGTTTCTTCTTGGCCCAAATACGCC.GGGGGTCC.GGGGGC.GGAGCCCCc..g                                                                                               >  2:920942/1‑101 (MQ=255)


              gacgGGGGCAAGGGGCAATGCGGCGCAAGGCCCCCCGGGCAACC.GGCCCCCGTTTCTTCTTGGCCCAAATACGCC.GGGGGTCC.GGGGGC.GGAGCCCCc..ggc                                                                                             >  1:4419044/1‑101 (MQ=255)


                cgGGGGCAAGGGGCAATGCGGCGCAAGGCCCCCCGGGCAACC.GGCCCCCGTTTCTTCTTGGCCCAAATACGCC.GGGGGTCC.GGGGGC.GGAGCCCCc..ggcgg                                                                                           >  1:2790017/1‑101 (MQ=255)


                cgGGGGCAAGGGGCAATGCGGCGCAAGGCCCCCCGGGCAACC.GGCCCCCGTTTCTTCTTGGCCCAAATACGCC.GGGGGTCC.GGGGGC.GGAGCCCCc..ggcgg                                                                                           >  2:4477788/1‑101 (MQ=255)


                 gggggCAAGGGGCAATGCGGCGCAAGGCCCCCCGGGCAACC.GGCCCCCGTTTCTTCTTGGCCCAAATACGCC.GGGGGTCC.GGGGGC.GGAGCCCCC..GGCggg                                                                                          >  1:2401887/1‑101 (MQ=255)


                 gggggCAAGGGGCAATGCGGCGCAAGGCCCCCCGGGCAACC.GGCCCCCGTTTCTTCTTGGCCCAAATACGCC.GGGGGTCC.GGGGGC.GGAGCCCCC..GGCggg                                                                                          >  1:1202710/1‑101 (MQ=255)


                 gggggCAAGGGGCAATGCGGCGCAAGGCCCCCCGGGCAACC.GGCCCCCGTTTCTTCTTGGCCCAAATACGCC.GGGGGTCC.GGGGGC.GGAGCCCCC..GGCggg                                                                                          >  2:912480/1‑101 (MQ=255)


                 gggggCAAGGGGCAATGCGGCGCAAGGCCCCCCGGGCAACC.GGCCCCCGTTTCTTCTTGGCCCAAATACGCC.GGGGGTCC.GGGGGC.GGAGCCCCC..GGCggg                                                                                          >  1:3749382/1‑101 (MQ=255)


                   gggcaaggggcaaTGCGGCGCAAGGCCCCCCGGGCAACC.GGCCCCCGTTTCTTCTTGGCCCAAATACGCC.GGGGGTCC.GGGGGC.GGAGCCCCC..GGCggggg                                                                                        >  1:3891948/1‑99 (MQ=255)


                    ggcaaggggcaaTGCGGCGCAAGGCCCCCCGGGCAACC.GGCCCCCGTTTCTTCTTGGCCCAAATACGCC.GGGGGTCC.GGGGGC.GGAGCCCCC..GGCGGGGcg                                                                                       >  1:5023402/1‑101 (MQ=255)


                     gcaaggggcaaTGCGGCGCAAGGCCCCCCGGGCAACC.GGCCCCCGTTTCTTCTTGGCCCAAATACGCC.GGGGGTCC.GGGGGC.GGAGCCCCC..GGCggggggg                                                                                      >  1:2533510/1‑97 (MQ=255)


                       aaggggcaaTGCGGCGCAAGGCCCCCCGGGCAACC.GGCCCCCGTTTCTTCTTGGCCCAAATACGCC.GGGGGTCC.GGGGGC.GGAGCCCCC..GGCGGGGggccg                                                                                    >  2:5019614/1‑101 (MQ=255)


                           ggcaaTGCGGCGCAAGGCCCCCCGGGCAACC.GGCCCCCGTTTCTTCTTGGCCCAAATACGCC.GGGGGTCC.GGGGGC.GGAGCCCCC..GGCgggggggggccgg                                                                                >  2:901222/1‑91 (MQ=255)


                            gcaaTGCGGCGCAAGGCCCCCCGGGCAACC.GGCCCCCGTTTCTTCCTGGCCCAAATACGCC.GGGGGTCC.GGGGGC.GGAGCCCCC..GGCGGGGCgccgcgccg                                                                               >  2:4802606/1‑99 (MQ=255)


                            gaacggcggcgC.AGGCCCCCCGGGCCACC.GGCCCCCTTTTTCTTTTTGCCCAAA.ACCCG.GGGGGGGC.GGGGGG.GGGGCCCCCCGGGCGGGTCgccgcgcgg                                                                               <  1:304618/96‑1 (MQ=255)


                             caaTGCGGCGCAAGGCCCCCCGGGCAACC.GGCCCCCGTTTCTTCTTGGCCCAAATACGCC.GGGGGTCC.GGGGGC.GGAGCCCCC..GGCGGGGGgccccgcggc                                                                              >  2:4636576/1‑101 (MQ=255)


                             caaTGCGGCGCAAGGCCCCCCGGGCAACC.GGCCCCCGTTTCTTCTTGGCCCAAATACGCC.GGGGGTCC.GGGGGC.GGAGCCCCC..GGCGGGGCgccccgcggc                                                                              >  1:709919/1‑101 (MQ=255)


                              aaTGCGGCGCAAGGCCCCCCGGGCAACC.GGCCCCCGTTTCTTCTTGGCCCAAATACGCC.GGGGGTCC.GGGGGC.GGAGCCCCC..GGCGGGGGggcgcccggcc                                                                             >  1:4101993/1‑101 (MQ=21)


                                 ggcgccccaGGCCCCCCCGGCCACCGGGCCCCCTTTGCTTCTTGGCCCAAAGACGCG.GGGGGTCG.GGGGGG.GGACCCCCC..GGCGGGTCgccgcgcggccgc                                                                           <  1:2480729/93‑1 (MQ=9)


                                      gcAAGGCCCCCCGGGCAACC.GGCCCCCGTTTCTTCTTGGCCCAAATACGCC.GGGGGTCC.GGGGGC.GGAGCCCCC..GGCGGGGCggcgcgcgggcgcgccggg                                                                     >  1:2981420/1‑97 (MQ=18)


                                       cAAGGCCCCCCGGGCAACC.GGCCCCCGTTTCTTCTTGGCCCAAATACGCC.GGGGGTCC.GGGGGC.GGAGCCCCC..GGCGGGGCGCCGCGCGGGCGCGC.GGC.Ga                                                                  >  2:1728808/1‑101 (MQ=255)


                                       cAAGGCCCCCCGGGCAACC.GGCCCCCGTTTCGTCTTGGCCCAAATACGCC.GGGGGTCC.GGGGGC.GGAGCCCCC..GGCGGGGCGCCGCGCGGCCGCgc.cgc.gg                                                                  >  1:4479152/1‑100 (MQ=255)


                                        aaGGCCCCCCGGGCAACC.GGCCCCCGTTTCTTCTTGGCCCAAATACGCC.GGGGGTCC.GGGGGC.GGAGCCCCC..GGCGGGGGGGCGCCCGGGCGCgc.ggc.gga                                                                 >  2:564755/1‑99 (MQ=17)


                                        aaGGCCCCCCGGGCAACC.GGCCCCCGTTTCTTCTTGGCCCAAATACGCC.GGGGGTCC.GGGGGC.GGAGCCCCC..GGCGGGGCGccgcgcgggcgcgc.ggggga                                                                  >  2:3370271/1‑97 (MQ=255)


                                        aaGGCCCCCCGGGCAACC.GGCCCCCGTTTCTTCTTGGCCCAAATACGCC.GGGGGTCC.GGGGGC.GGAGCCCCC..GGCGGGGCGccgcgcggccgcgc.ggggga                                                                  >  2:2301041/1‑97 (MQ=255)


                                         gggCCCCCGGGCCACCC.GGCCCCGGTTTCTGCTGGGCGAAAACCCGCG.GGGGGTCG.GGGGGG.GGGGCCCCC..GGCGGGTCGCCGCGCGGCCGCGC.GGC.Gaaa                                                                <  1:3262919/100‑1 (MQ=9)


                                         aGGCCCCCCGGGCAACC.GGCCCCCGTTTCTTCTTGGCCCAAATACGCC.GGGGGTCC.GGGGGC.GGAGCCCCC..GGCGGGGGGccgcgcggccgcgc.gggggaa                                                                 >  1:602480/1‑96 (MQ=255)


                                           gCCCCCCGGGCAACC.GGCCCCCGTTTCTTCTTGGCCCAAATACGCC.GGGGGTCC.GGGGGC.GGAGCCCCC..GGCGGGGCGCCGCCCGGGCCCcc.ggc.gggaca                                                              >  1:4210183/1‑96 (MQ=17)


                                           ccccccgGGGCCCCC.CGCCCCCTTTTTCTTTGGGCCCAAACGCGGG.GGGGGGGG.GGGGGG.GGGCCCCCCG.GGCGGGTCGCCGCGCGGCCGCGC.GGC.GAAAc                                                               <  1:4745071/100‑1 (MQ=2)


                                            ccccccGGGCCCCC.GGCCCCCGTTTTTTCTTGGCCCAAAGCCGGC.GGGGGGCC.GGGGGG.GGGGCCCCCG.GGCGGGTCGCCGCGCGGCCGCGC.GGC.GAAACa                                                              <  1:1558632/101‑1 (MQ=11)


                                              ccccGGGCCCGC.CGCCCCCGTTTTTTC.GGGCCCAAAAGCGCG.GGGGGGGC.GGGGGG.GGGCCCCCCCGGGCGGGTCGCCGCGCGGCCGCGC.GGC.GAAACaaa                                                            <  1:359346/101‑1 (MQ=2)


                                               cccGGCCACCC.GCCCCCGGTTTCTCCTGGCCCCAAACCGGCG.GGGGGGCG.GGGGGG.GGCCCCCCG..GGCGGGTCGCCGCGCGGCCGCGC.GGC.GAAACAAAgg                                                          <  1:2082856/101‑1 (MQ=9)


                                                 cGGGCCCCC.GCCCCCGGTTTCTTCTGGCCCAAAATCCGCG.GGGGGCCG.GGGGGC.GGACCCCCC..GGCGGGTCGCCGCGCGGCCGCGC.GGC.GAAACAAAGgac                                                        <  1:564834/101‑1 (MQ=14)


                                                  gggCAACC.GGCCCCCGTTTCTTCTTGGCCCAAATACGCC.GGGGGTCC.GGGGGC.GGAGCCCCC..GGCGGGGCGCCCCGCGGCCGCGC.GGC.GCGAAAAAAgacc                                                       >  1:3248423/1‑101 (MQ=14)


                                                     cAACC.GGCCCCCGTTTCTTCTTGGCCCAAATACGCC.GGGGGTCC.GGGGGC.GGAGCCCCC..GGCGGGGCGCCGCGCGGGCGCGC.GGC.GGAACAAAAgacccac                                                    >  2:4668684/1‑101 (MQ=17)


                                                      aaCC.GGCCCCCGTTTCTTCTTGGCCCAAATACGCC.GGGGGTCC.GGGGGC.GGAGCCCCC..GGCGGGGCGCCGCGGGGCCGCGC.GGC.GGAACCAAAgaaccacc                                                   >  2:203974/1‑101 (MQ=14)


                                                            gCCCCCGTTTCTTCTTGGCCCAAATACGCC.GGGGGTCC.GGGGGC.GGAGCCCCC..GGCGGGGCGCCGCGCGGGCGCGC.GGC.GGAACAAAAGACCCACC.G.GGcg                                            >  1:2054420/1‑100 (MQ=17)


                                                            gCCCCCGTTTCTTCTTGGCCCAAATACGCC.GGGGGTCC.GGGGGC.GGAGCCCCC..GGCGGGGAGCCACACGGCGCCGC.GGG.CCAAAAAACGAACGCCC.g.ggac                                            >  1:3500198/1‑99 (MQ=2)


                                                             cccccGTTTTCTTTTGGCCCAAAGTCGGC.GGGGGGTC.GGGGGCGGGCGCCCCC..GGCGGGTCGCCGCGCGGCCGCGC.GGC.GAAACAAAGGACCGACC.G.GGCa                                            <  2:4788516/101‑1 (MQ=17)


                                                              ccccGTTTCTTCTTGGCCCAAATACGCC.GGGGGTCC.GGGGGC.GGAGCCCCC..GGCGGGGGGCCGCGCGGGCGCCG.GGG.GGGACAAAAGACCCACC.c.gggcgc                                          >  1:2624912/1‑97 (MQ=11)


                                                                ccctttCTTTCTGGCCCCAAGGCGGCGGGGGGTCG.GGGGGC.GGGCCCCCG..GGCGGGTCGCCGCGCGGCCGCGC.GGC.GAAACAAAGGACCGACC.G.GGCA.Gcc                                        <  2:2065538/98‑1 (MQ=16)


                                                                ccGTTTCTTCTTGGCCCAAATACGCC.GGGGGTCC.GGGGGC.GGAGCCCCC..GGCGGGGCGCCGCGCGGGCGCGC.GGC.GGAACAAAAGAGCCACC.G.GGCG.Gccc                                       >  1:1126329/1‑101 (MQ=17)


                                                                 cGTTTCTTCTTGGCCCAAATACGCC.GGGGGTCC.GGGGGC.GGAGCCCCC..GGCGGGGGGCCGCGCGGCCGCGC.GGC.GGAACAAAAGACCGACC.C.GGCA.Gcccc                                      >  2:577538/1‑101 (MQ=18)


                                                                 cGTTTCTTCTTGGCCCAAATACGCC.GGGGGTCC.GGGGGC.GGAGCCCCC..GGCGGGGCGCCGCGCGGCCGCGC.GGC.GGAAAAAAAGAACGACC.G.GGCA.Gcccc                                      >  2:477515/1‑101 (MQ=17)


                                                                  gTTTCTTCTTGGCCCAAATACGCC.GGGGGTCC.GGGGGC.GGAGCCCCC..GGCGGGGGGCCGCGCGGCCCCGC.GGC.GGAACAAAAGACCGAAC.G.GGCA.Ggcccc                                     >  2:4420898/1‑101 (MQ=17)


                                                                  gTTTCTTCTTGGCCCAAATACGCC.GGGGGTCC.GGGGGC.GGAGCCCCC..GGCGGGGCGCCGCGGGGGCGCGC.GGG.GGGACAAAAGAACCACC.g.ggggggcccc                                      >  1:3565225/1‑93 (MQ=14)


                                                                   tttCTTCTTGGCCCAAATACGCC.GGGGGTCC.GGGGGC.GGAGCCCCC..GGCGGGGGGCCGCCCGGCCGCGC.GGC.GGAACAAAAGACCGAAC.G.GGCC.Ggccccc                                    >  2:2336150/1‑101 (MQ=17)


                                                                   tttCTTCTTGGCCCAAATACGCC.GGGGGTCC.GGGGGC.GGAGCCCCC..GGCGGGGCGCCGCCCGGGCGCGC.GGG.GGAACAAAACAGCCACC.G.CGGC.Gcccccc                                    >  1:4470947/1‑101 (MQ=14)


                                                                   tttCTTCTTGGCCCAAACACGCC.GGGGGTCC.GGGGGC.GGAGCCCCC..GGCGGGTCGCCGCGCGGCCGCGC.GGC.GAAACAAAGGACCGACC.G.GGCA.Gcccccc                                    <  2:3225190/101‑1 (MQ=255)


                                                                    ttcttcTTGGCCCAAATACGCC.GGGGGTCC.GGGGGC.GGAGCCCCC..GGCGGGGCGCCGCGCGGCCGCGC.GGG.GGAACAAAAGACCGACC.G.GGGA.Gccccccc                                   >  1:1438317/1‑100 (MQ=18)


                                                                     tcttctTGGCCCAAATACGCC.GGGGGTCC.GGGGGC.GGAGCCCCC..GGCGGGGTGCCCCGCCGGCGCGC.GGC.GGAAAAAAAGACCCACC.GCGGGG.GCCCCCCg                                   >  1:1677843/1‑101 (MQ=9)


                                                                      cttcttGGCCCAAATACGCC.GGGGGTCC.GGGGGC.GGAGCCCCC..GGCGGGGCGGCGCCCGGGCGCGG.GGG.GGAACAAAAGACCCCCC.C.GGCC.Gccccccccc                                 >  1:3003230/1‑98 (MQ=9)


                                                                        tcttGGCCCAAATACGCC.GGGGGTCC.GGGGGC.GGAGCCCCC..GGCGGGGGGCCGCGCGGCCGCGC.GGC.GGAACAAAGGAACGACC.G.GGGG.Gcccccccgccc                               >  1:3029863/1‑96 (MQ=17)


                                                                        tcttGGCCCAAATACGCC.GGGGGTCC.GGGGGC.GGAGCCCCC..GGCGGGGGGCCCCGCGGGCGCGC.GGCGGAAAAAAAGAACGAACC.G.GGCG.ACCCCCCggcg                                >  2:4588113/1‑99 (MQ=9)


                                                                          ctGGCCGAAAATCGGC.GGGGGGCCGGGGGGC.GGACCCCCG..GGCGGGTCGCCGCGCGGCCGCGC.GGC.GAAACAAAGGACCGACC.G.GGCA.GCCCCCCGGTCgg                              <  1:810675/100‑1 (MQ=21)


                                                                            ggCCCAAATACGCC.GGGGGTCC.GGGGGC.GGAGCCCCC..GGCGGGGCGGCGCGCGGCCGCGC.GGG.GGAACAAAAGAACGACC.G.GGGC.GCCCCCCCGCCGGccc                           >  1:4837154/1‑100 (MQ=17)


                                                                            ggCCCAAATACGCC.GGGGGTCC.GGGGGC.GGAGCCCCC..GGCGGGGCGCCGCGCGGCCCCGC.GGC.GGAACAAAAGACCGACC.G.GGCA.Cccccccccgcggccc                           >  1:3734276/1‑92 (MQ=17)


                                                                            gcccaaaaTGCGCG.GGGGGACG.GGGGGC.GGACCCCCC..GGCGGGTCGCCGCGCGGCCGCGC.GGC.GAAACAAAGGACCGACC.G.GGCA.GCCCCCCGGTCGGCCa                           <  2:3734798/96‑1 (MQ=21)


                                                                              cccAAATACGCC.GGGGGTCC.GGGGGC.GGAGCCCCC..GGCGGGGCGCCGCGCGGCCGCGC.GGG.GGAAAAAAGGAACGACC.C.GGCA.GCCCCCCCGGCGGcccgg                         >  1:3756214/1‑98 (MQ=17)


                                                                              ccaaagggcGCG.GGGGGCCG.GGGGGC.GGCCCCCCG..GGCGGGTCGCCGCGCGGCCGCGC.GGC.GAAACAAAGGACCGACC.G.GGCA.GCCCCCCGGTCGGCCAGt                         <  2:3749104/93‑1 (MQ=25)


                                                                               caaaacgcggc.GGGGGGCC.GGGGGG.GGCGCCCCC..GGCGGGTCGCCGCGCGGCCGCGC.GGC.GAAACAAAGGACCGACC.G.GGCA.GCCCCCCGGTCGGCCAGTg                        <  2:3063098/91‑1 (MQ=25)


                                                                                cAAATACGCC.GGGGGTCC.GGGGGC.GGAGCCCCC..GGCGGGGGCCCGCGCGGCC.CGCGGGC.GAAACAAAAGAACCAAC.A.GGGG.GGCCCCCGGCCGGccccggc                       >  2:4027009/1‑96 (MQ=9)


                                                                                cAAATACGCC.GGGGGTCC.GGGGGC.GGAGCCCCC..GGCGGGGCGCCGCGCGGCCGCGC.GGC.GGAACAAAAGAACGACC.C.GGCA.GCCCCCCGGGCGGCCAGTGa                       >  2:1366203/1‑101 (MQ=18)


                                                                                  aaTACGCC.GGGGGTCC.GGGGGC.GGAGCCCCC..GGCGGGGCGCCGCGCGGGCGCGC.GGC.GGAACAAAAGAACGACCGG.GGCG.GCCCCCCGG.CGGGCAGGGAAc                     >  2:3670262/1‑101 (MQ=17)


                                                                                  aaTACGCC.GGGGGTCC.GGGGGC.GGAGCCCCC..GGCGGGGCGCCCCGCGGGCCCGC.GGC.GCAACAAAAGACCGACC.G.GGCACGCCCCCCGG.CGGCCAGAGAAc                     >  2:3193679/1‑101 (MQ=18)


                                                                                     aCGCC.GGGGGTCC.AGGGGC.GGAGCCCCC..GGCGGGGGGCCCGGCGGCCGCGCGGGG.GAAAAAAAGACCCAACC.G.GGAA.GCCCCCCGGGGGGCCAG.GAACCCg                  >  2:2881707/1‑101 (MQ=12)


                                                                                       gCC.GGGGGTCC.GGGGGC.GGAGCCCCC..GGCGGGGCGCCGCGCGGGCGCGC.GGC.GAAAAAAAAGACCCACC.C.GGCA.GCCCCCCGGGCGGGCCGTGGAACCgca                >  2:2108827/1‑99 (MQ=17)


                                                                                        cc.GGGGGTCC.GGGGGC.GGAGCCCCC..GGCGGGGCGCCGCGCGGCCGCGC.GGC.GGAACAAAAGGCCGACC.G.GGCC.GCCCCCCCGCCGGCCCGGGAAcccccaa               >  1:4544294/1‑97 (MQ=18)


                                                                                         c.GGGGGTCC.GGGGGC.GGAGCCCCC..GGCGGGGCCGCGCGGGGGCGCGC.GGC.GGAACAAAAGACCGACC.G.GGCA.GGCCCCCCGGCGGCCCGGGAAACCGaaaa              >  2:2394065/1‑100 (MQ=16)


                                                                                           gggggTCC.GGGGGC.GGAGCCCCC..GGCGGGGCGGCGCGCGGGCGCGC.GGG.GGAACAAAAGACCGCCC.C.GGGA.GGCCCCCCGCCGGCCCGGGAAccccacaac             >  2:65735/1‑95 (MQ=12)


                                                                                           gggggTCC.GGGGGC.GGAGCCCCC..GGCGGGGCGCCGCGCGGGCGCGC.GGC.GGAACAAAAGACCGACC.G.GGGA.GCCCCCCGCGCGGGCCGGGAACCCGCAAcg             >  2:2736422/1‑101 (MQ=18)


                                                                                           gggggTCC.GGGGGC.GGAGCCCCC..GGCGGGGCGCCGCCCGGCCGCGC.GGC.GGAACAAAAGAACGACC.G.GGCA.GCCCCCCCGCCGGCCCGGGAAACCCaaaac             >  1:4698820/1‑99 (MQ=18)


                                                                                            ggggTCC.GGGGGC.GGAGCCCCC..GGCGGGTCGCCGCGCGGCCCCGC.GGC.GGAACAAAAGACCGACC.G.GGCA.GCCCCCCCGCCGGCCCGGGGACCCGCAAccc            >  1:2237811/1‑99 (MQ=18)


                                                                                              ggTCC.GGGGGC.GGAGCCCCC..GGCGGGTCGCCGCGCGGCCGCGC.GGC.GAAACAAAGGACCGACC.G.GGCA.GCCCCCCGGTCGGCCAGTGAACCCGAAACGC.Ga         <  2:4101676/101‑1 (MQ=255)


                                                                                               gggcggggggG.GGCCCCCCG..GGCGGGTCGCCGCGCGGCCGCGC.GGC.GAAACAAAGGACCGACC.G.GGCA.GCCCCCCGGTCGGCCAGTGAACCCGAAACGC.Ga         <  2:4976707/96‑1 (MQ=38)


                                                                                                tCC.GGGGGC.GGGCCCCCC..GGCGGGTCGCCGCGCGGCCGCGC.GGC.GAAACAAAGGACCGACC.G.GGCA.GCCCCCCGGTCGGCCAGTGAACCCGAAACGC.GAAg       <  2:1144984/101‑1 (MQ=255)


                                                                                                 cc.GGGGGC.GGAGCCCCC..GGCGGGGCGCCGCGCGGCCGCGC.GGG.GGAAAAAAGGACCGACC.C.GGCC.GCCCCCCCGGCGGCCCGGGAACCCCAAACGC.GAAgg      >  1:1237373/1‑101 (MQ=21)


                                                                                                  c.GGGGGC.GGAGCCCCC..GGCGGGGCGCCGCGCGGCCGCGC.GGG.GGAACAAAAGACCGACC.G.GGCA.GCCCCCCCGCCGGCCCGGGGACCCCCAACGC.GAAggg     >  1:2876115/1‑101 (MQ=21)


                                                                                                  c.GGGGGC.GGAGCCCCC..GGCGGGGCGCCGCGCGGCCCCGC.GGC.GGAACAAAAGACCGACC.G.GGCA.GCCCCCCCGGCGGCCCGTGAACCCGCAACGC.GAAggg     >  1:1616311/1‑101 (MQ=25)


                                                                                                   ggggggG.GGCCCCCCG..GGCGGGTCGCCGCGCGGCCGCGC.GGC.GAAACAAAGGACCGACC.G.GGCA.GCCCCCCGGTCGGCCAGTGAACCCGAAACGC.GAAggg     <  1:1783484/100‑1 (MQ=38)


                                                                                                    gggggC.GGAGCCCCC..GGCGGGTCGCCCCCCGGGCGCGC.GGC.GGAAAAAAAGACCCACC.C.GGGA.GGCCCCCCGCCGGCCACTGAACCCCAAAcgccgcggga     >  2:44585/1‑94 (MQ=12)


                                                                                                     ggggG.GGACCCCCC..GGCGGGTCGCCGCGCGGCCGCGC.GGC.GAAACAAAGGACCGACC.G.GGCA.GCCCCCCGGTCGGCCAGTGAACCCGAAACGC.GAAGGGAc   <  1:5048783/101‑1 (MQ=255)


                                                                                                      gggC.GGCGCCCCC..GGCGGGTCGCCGCGCGGCCGCGC.GGC.GAAACAAAGGACCGACC.G.GGCA.GCCCCCCGGTCGGCCAGTGAACCCGAAACGC.GAAGGGAcg  <  2:1303914/101‑1 (MQ=255)


                                                                                                      gggC.GGAGCCCCC..GGCGGGGCGCCGCGCGGCCGCGC.GGC.GAAACAAAAGACCGACC.C.GGCA.GCCCCCCGGGCGGCCCGTGAACCCCAAACGCGGAAgggcg   >  2:4844744/1‑99 (MQ=25)


GTAGCAGCCTGCACGACGGGGGCAAGGGGCAATGCGGCGCAAGGCCCCCCGGGCAACC.GGCCCCCGTTTCTTCTTGGCCCAAATACGCC.GGGGGTCC.GGGGGC.GGAGCCCCC..GGCGGGTCGCCGCGCGGCCGCGC.GGC.GAAACAAAGGACCGACC.G.GGCA.GCCCCCCGGTCGGCCAGTGAACCCGAAACGC.GAAGGGACG  >  NC_014034/3276277‑3276476

Base quality scores:


ATCG

< 3 ≤


ATCG

< 23 ≤


ATCG

< 31 ≤


ATCG

< 35 ≤


ATCG

< 41 ≤


ATCG