BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	1253895 =	61 (0.250)	16 (0.070)	2/198	29.6	0.11	intergenic (+53/+38)	RCAP_rcc01181/hisH	hypothetical protein/imidazole glycerol phosphate synthase subunit HisH
*	?	NC_014034	2577165 =	195 (0.800)	16 (0.070)	2/198	29.6	0.11	intergenic (+87/‑342)	fdx/purU	ferredoxin VI/formyltetrahydrofolate deformylase
Rejected: Position hash score below cutoff.

Only 100 of 196 total aligned reads displayed.


AAAAGCAGATCTGACATCGCGATGAAACGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCC.GGC..GGGG..G..C..CGCCCCCGCACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCGGGCCCCTTTTAT  >  NC_014034/2577065‑2577258


   aGCAGATCTGACATCGCGATGAAACGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCC.GGC..GGGG..g..c                                                                                              <  2:1400306/101‑1 (MQ=255)


      aGATCTGACATCGCGATGAAACGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCC.GGC..gggg..gggcc                                                                                             >  2:3164405/1‑97 (MQ=255)


        aTCTGACATCGCGATGAAACGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCC.GGC..gggg..ggggggc                                                                                           >  1:3966412/1‑95 (MQ=255)


        aTCTGACATCGCGATGAAACGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCC.GGC..cggg..ggggcgg                                                                                           >  1:3182424/1‑95 (MQ=255)


         tCTGACATCGCGATGAAACGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCC.GGC..gggg..ggggcggc                                                                                          >  1:2823481/1‑94 (MQ=255)


           tGACATCGCGATGAAACGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCC.GGC..GGGG..g..ctccgcccc                                                                                      <  2:3277552/101‑9 (MQ=255)


            gACATCGCGATGAAACGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGGC..gggg..gggggcggcc                                                                                        >  1:4152372/1‑92 (MQ=255)


            gACATCGCGATGAAACGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCC.GGC..gggg..gggggcggccc                                                                                       >  1:3316588/1‑91 (MQ=255)


             aCATCGCGATGAAACGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCC.GGC..GGGG..GCTC..CGCCCCCg                                                                                    <  1:4692204/101‑1 (MQ=255)


             aCATCGCGATGAAACGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCC.GGC..GGGG..GCTC..CGCCCCCg                                                                                    <  1:2939751/101‑1 (MQ=255)


              cATCGCGATGAAACGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCC.GGG..CGGG..g..c..ggcgcgccgcc                                                                                 >  2:1197295/1‑93 (MQ=255)


              cATCGCGATGAAACGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCC.GGC..GGGG..GCTC..CGCCCCCGc                                                                                   <  1:3460286/101‑1 (MQ=255)


               aTCGCGATGAAACGGCCGCCTTCGGGCGCCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCC.GGC..GGGG..GCTC..CGCCCCCGCa                                                                                  <  2:2981858/101‑1 (MQ=38)


                 cgcgATGAAACGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCCCCAAGGCGGCCC..GC..GGCC..G..C..CGCCGGCGCAcgggc                                                                             >  1:1714793/1‑97 (MQ=255)


                    gATGAAACGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCC.GGC..GGGG..GCTC..CGCCCCCGCAccccc                                                                             <  1:2295240/101‑1 (MQ=255)


                    gATGAAACGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCC.GGC..GGGG..GCTC..CGCCCCCGCAccccc                                                                             <  1:2565371/101‑1 (MQ=255)


                    gATGAAACGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCC.GGC..GCGG..G..G..CGCCCCGCCCccccccc                                                                           >  2:2933781/1‑99 (MQ=255)


                     aTGAAACGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGCCCC.GGC..GGGG..GCTC..CGCCCCCGCACCCCCg                                                                            <  1:4412909/101‑1 (MQ=37)


                     aTGAAACGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCC.GGC..GGGG..GCTC..CGCCCCCGCACCCCCg                                                                            <  1:733027/101‑1 (MQ=255)


                      tGAAACGGCCGCCTGCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCC.GGC..GGGG..GCTC..CGCCCCCGCACCCCCgg                                                                           <  2:3320255/101‑1 (MQ=37)


                       gAAACGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCC.GGC..GGGG..GCTC..CGCCCCCGCACCCCCGGc                                                                          <  1:2611462/101‑1 (MQ=255)


                       gAAACGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCC.GGC..GGGG..G..CGGCGCCCCCGCCcccccccc                                                                          >  1:1944868/1‑98 (MQ=38)


                       gAAACGGCCGCCTTCGGGCGGCCTTTTGCCTGGGAGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCC.GGC..GGGG..GGTC..CGCCCCCGCCCCCCCCGc                                                                          >  1:2752677/1‑101 (MQ=38)


                         aaCGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGCCCC.GGCGGGGGG..G..C..CGCCCCCCCCCCCCCCGcct                                                                        >  2:3358755/1‑99 (MQ=255)


                         aaCGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCC.GGC..GGGG..GCTC..CGCCCCCGCACCCCCGGCGt                                                                        <  1:334801/101‑1 (MQ=255)


                           cGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCC.GGC..GGGG..GCTC..CGCCCCCGCACCCCCGGCGTAt                                                                      <  2:1610975/101‑1 (MQ=255)


                           cGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCC.GGC..GGGG..GCTC..CGCCCCCGCACCCCCGGCGTAt                                                                      <  1:2381179/101‑1 (MQ=255)


                           cGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCC.GGC..GGGG..GCTC..CGCCCCCGCACCCCCGGCGTAt                                                                      <  2:1203583/101‑1 (MQ=255)


                            ggCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCC.GGC..GGGG..GCTC..CGCCCCCGCACCCCCGGCGTAtt                                                                     <  1:555398/101‑1 (MQ=255)


                            ggCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCC.GGC..GGGG..GCTC..CGCCCCCGCACCCCCGGCGTAtt                                                                     <  2:112648/101‑1 (MQ=255)


                             gccgccTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCC.GGC..GGGG..GCTC..CGCCCCCGCACCCCCGGCGTAttt                                                                    <  2:2048040/101‑1 (MQ=255)


                             gccgccTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCC.GGC..GGGG..GCTC..CGCCCCCGCACCCCCGGCGTAttt                                                                    <  2:2844081/101‑1 (MQ=255)


                               cgccTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCC.GGC..GGGG..GCTC..CGCCCCCGCACCCCCGGCGTATTTGc                                                                  <  2:4964240/101‑1 (MQ=255)


                                    tCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCC.GGC..GGGG..GCTC..CGCCCCCGCACCCCCGGCGTATTTGCACCAg                                                             <  1:987576/101‑1 (MQ=255)


                                    tCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCC.GGC..GGGG..GCTC..CGCCCCCGCACCCCCGGCGTATTTGCACCAg                                                             <  1:2432150/101‑1 (MQ=255)


                                     cGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCC.GGC..GGGG..GCTC..CGCCCCCGCACCCCCGGCGTATTTGCACCAgg                                                            <  2:4104770/101‑1 (MQ=255)


                                     cGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCC.GGC..GGGG..GCCC..CGCCCCCGCACCCCCGGCGTATTTGCACCAgg                                                            >  1:2007057/1‑101 (MQ=255)


                                      gggCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCC.GGC..GGGG..GCTC..CGCCCCCGCACCCCCGGCGTATTTGCACCAGGa                                                           >  1:3150366/1‑101 (MQ=255)


                                      gggCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCC.GGC..GGGG..GCTC..CGCCCCCGCACCCCCGGCGGATTTGCACCCGGa                                                           >  1:4179360/1‑101 (MQ=25)


                                      gggCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCC.GGC..GGGG..GCTC..CGCCCCCGCACCCCCGGCGCATTTGCACCCGGa                                                           >  1:1362308/1‑101 (MQ=25)


                                        gcggcCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCC.GGC..GGGG..GCTC..CGCCCCCGCACCCCCGGCGTATTTGCACCAGGaaa                                                         <  2:1379065/101‑1 (MQ=255)


                                          ggcCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCC.GGC..GGGG..GCTC..CGCCCCCGCACCCCCGGCGTATTTGCACCAGGAaaag                                                       <  2:2677169/101‑1 (MQ=255)


                                          ggcCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCC.GGC..GGGG..GCTC..CGCCCCCGCACCCCCGGCGTATTTGCACCAGGAaaag                                                       <  1:1569856/101‑1 (MQ=255)


                                            ccTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCC.GGC..GGGG..GCTC..CGCCCCCGCACCCCCGGCGTATTTGCACCAGGAaaagcc                                                     <  1:367361/101‑1 (MQ=255)


                                             cTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCTACCC.GGC..GGGG..GCTC..CGCCCCCGCACCCCCGGCGTATTTGCACCAGGAaaagcca                                                    <  2:1217742/101‑1 (MQ=37)


                                             cTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCC.GGC..GGGG..GCTC..CGCCCCCGCACCCCCGGCGTATTTGCACCAGGAaaagcca                                                    <  1:97462/101‑1 (MQ=255)


                                             cTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCC.GGC..GGGG..GCTC..CGCCCCCGCACCCCCGGCGTATTTGCACCAGGAaaagcca                                                    <  2:3966120/101‑1 (MQ=255)


                                             cTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCC.GGC..GGGG..GCTC..CGCCCCCGCACCCCCCGCGGATTTGCACCAGGCaaagcca                                                    >  1:2523964/1‑101 (MQ=25)


                                               tttGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCC.GGC..GGGG..GCTC..CGCCCCCGCACCCCCGGCGTATTTGCACCAGGAaaagccaaa                                                  <  2:3182173/101‑1 (MQ=255)


                                               tttGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCC.GGC..GGGG..GCTC..CGCCCCCGCACCCCCGGCGTATTTGCACCAGGAaaagccaaa                                                  <  1:668828/101‑1 (MQ=255)


                                                 tGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCC.GGC..GGGG..GCTC..CGCCCCCGCACCCCCGGCGTATTTGCACCAGGAaaagccaaagc                                                <  2:1733592/101‑1 (MQ=255)


                                                 tGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCC.GGC..GGGG..GCTC..CGCCCCCGCACCCCCGGCGTATTTGCACCAGGAaaagccaaagc                                                <  1:1776739/101‑1 (MQ=255)


                                                    cTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCC.GGC..GGGG..GCTC..CGCCCCCGCACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGt                                             <  2:2775560/101‑1 (MQ=255)


                                                      gggCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCC.GGC..GGGG..GCTC..CGCCCCCGCACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTcc                                           <  1:2079972/101‑1 (MQ=255)


                                                        gcgcGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCC.GGC..GGGG..GGTC..CGCCCCCGCACCCCCGGCGGATTTGCACCAGGGAAAACCAAAACCGGcccc                                         >  2:4383708/1‑101 (MQ=37)


                                                        gcgcGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCC.GGC..GGGG..GCTC..CGCCCCCGCACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTcccc                                         <  2:1506488/101‑1 (MQ=255)


                                                        gcgcGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCC.GGC..GGGG..GCTC..CGCCCCCGCACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTcccc                                         <  2:3894342/101‑1 (MQ=255)


                                                        gcgcGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCC.GGC..GGGG..GCTC..CGCCCCCGCACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTcccc                                         <  1:4079756/101‑1 (MQ=255)


                                                         cgcgAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCC.GGC..GGGG..GCTC..CGCCCCCGCACCCCCGGCGTATTTGCACCACGGAAAGCCAAAGCCCTTCCCg                                        >  2:2139814/1‑101 (MQ=25)


                                                           cgAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCC.GGC..GGGG..GCTC..CGCCCCCGCACCCCCGGCGTATTTGCACCCGGAAAAACCAAAGCCGTCCCCGGc                                      >  2:4821398/1‑101 (MQ=25)


                                                           cgAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCC.GGC..GGGG..GCTC..CGCCCCCGCACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGc                                      <  2:1060055/101‑1 (MQ=255)


                                                            gAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCC.GGC..GGGG..GGTC..CCCCCCCCCCCCCCCCGCGGATTTGTACCAGGGAAAGCCCAAAACGTCCCCCGcc                                     >  1:312856/1‑100 (MQ=255)


                                                            gAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCC.GGC..GGGG..GCTC..CCCCCCCGCACCCCCGGCGTATTTGCCCCAGGAAAAGCCAAAACCGTCCCCCGCa                                     >  1:589596/1‑101 (MQ=25)


                                                               aGCGTTTCGCCTTGGCTTCGCCAAGGCGACCC.GGC..GGGG..GCTC..CGCCCCCGCACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGa                                  <  1:865246/101‑1 (MQ=255)


                                                                 cGTTTCGCCTTGGCTTCGCCAAGGCGACCC.GGC..GGGG..GCTC..CGCCCCCGCACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGAcc                                <  2:3677906/101‑1 (MQ=255)


                                                                  gTTTCGCCTTGGCTTCGCCAAGGCGACCC.GGC..GGGG..GCTC..CCCCCCCCCCCCCCCGGCGGCTTTTCACCAGGGAAAACCAAAGCCGGCCCCCGCCGGGCCg                               >  1:3822863/1‑101 (MQ=16)


                                                                   tttCGCCTTGGCTTCGCCAAGGCGACCC.GGC..GGGG..GCTC..CGCCCCCGCACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGa                              <  1:2934008/101‑1 (MQ=255)


                                                                     tCGCCTTGGCTTCGCCAAGGCGACCC.GGC..GGGG..GCTC..CGCCCCCGCACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAg                            <  2:1840911/101‑1 (MQ=255)


                                                                      cGCCTTGGCTTCGCCAAGGCGACCC.GGC..GGGG..GCTC..CGCCCCCGCACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAgg                           <  2:4375576/101‑1 (MQ=255)


                                                                          ttGGCTTCGCCAAGGCGACCC.GGC..GGGG..GCTC..CGCCCCCGCCCCCCCCGCGGATTTGCACCCGGAAAAGCCAAAACCGTCCCCCGCCGGACCGAAAGcccc                       >  1:2692973/1‑99 (MQ=21)


                                                                          ttGGCTTCGCCAAGGCGACCC.GGC..GGGG..GCTC..CGCCCCCGCACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTc                       <  2:4591924/101‑1 (MQ=255)


                                                                          ttGGCTTCGCCAAGGCGACCC.GGC..GGGG..GCTC..CGCCCCCGCACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTc                       <  2:4152055/101‑1 (MQ=255)


                                                                          ttGGCTTCGCCAAGGCGACCC.GGC..GGGG..GCTC..CGCCCCCGCACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTc                       <  2:1966748/101‑1 (MQ=255)


                                                                          ttGGCTTCGCCAAGGCGACCC.GGC..GGGG..GCTC..CGCCCCCGCACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTc                       <  1:1075286/101‑1 (MQ=255)


                                                                           tGGCTTCGCCAAGGCGACCC.GGC..GGGG..GCTC..CGCCCCCGCACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCa                      <  1:3872502/101‑1 (MQ=255)


                                                                           tGGCTTCGCCAAGGCGACCC.GGC..GGGG..GCTC..CGCCCCCGCACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCa                      <  1:2219330/101‑1 (MQ=255)


                                                                            ggCTTCGCCAAGGCGACCC.GGC..GGGG..GCTC..CGCCCCCGCACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAg                     <  1:2126964/101‑1 (MQ=255)


                                                                            ggCTTCGCCAAGGCGACCC.GGC..GGGG..GCTC..CGCCCCCGCACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAg                     <  2:3600088/101‑1 (MQ=255)


                                                                             gCTTCGCCAAGGCGACCC.GGC..GGGG..GCTC..CGCCCCCGCACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAgg                    <  2:4992001/101‑1 (MQ=255)


                                                                             gCTGCGCCAAGGCGACCC.GGC..GGGC..GCTC..CGCCCCCGCACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAgg                    <  2:657577/101‑1 (MQ=37)


                                                                              cTTCGCCAAGGCGACCC.GGC..GGGG..GCTC..CGCCCCCGCACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGa                   <  2:540100/101‑1 (MQ=255)


                                                                               ttCGCCAAGGCGACCC.GGC..GGGG..GCTC..CGCCCCCGCACCCCCCGCGTATTTGCACCAGGAAAAGCCAAAGCCGTGCCCGGCAGGACCGAAAGCCTCAGGAc                  >  2:394775/1‑101 (MQ=37)


                                                                                 cGCCAAGGCGACCC.GGC..GGGG..GCTC..CGCCCCCGCACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGAccc                <  1:4826298/101‑1 (MQ=255)


                                                                                  gCCAAGGCGGCCC.GGC..GGGGCCT..C..CGCCCCCGCACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGAcccc               <  1:1875364/101‑1 (MQ=37)


                                                                                  gCCAAGGCGACCC.GGC..GGGG..GCTC..CGCCCCCGCACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGAcccc               <  2:398307/101‑1 (MQ=255)


                                                                                  gCCAAGGCGACCC.GGC..GGGG..GCTC..CGCCCCCGCACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGAcccc               <  1:2773745/101‑1 (MQ=255)


                                                                                  gCCAAGGCGACCC.GGC..GGGG..GCTC..CGCCCCCGCACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGAcacc               <  1:2881919/101‑1 (MQ=37)


                                                                                   ccAAGGCGACCC.GGC..GGGG..GCTC..CGCCCCCGCACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCg              <  1:1197412/101‑1 (MQ=255)


                                                                                    cAAGGCGACCC.GGC..GGGG..GCTC..CGCCCCCGCACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCgg             <  2:4436655/101‑1 (MQ=255)


                                                                                    cAAGGCGACCC.GGC..GGGG..GCTC..CCCCCCCCCACCCCCCGCGGATTTGCACCAGGAAAAGAAAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGCccccag             >  1:5009794/1‑99 (MQ=255)


                                                                                        gCGTCCC.GGC..GGGC..GCTC..CGCCCCCGCACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCGGGccc         <  2:2336361/101‑1 (MQ=37)


                                                                                         cGACCC.GGC..GGGG..GCTC..CGCCCCCGCACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCGGGcccc        <  2:4265311/101‑1 (MQ=255)


                                                                                          gACCC.GGC..GGGG..GCTC..CGCCCCCGCACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCGGGCCCCt       <  1:241309/101‑1 (MQ=255)


                                                                                          gACCC.GGC..GGGG..GCTC..CGCCCCCGCACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCGGGCCCCt       <  2:3090187/101‑1 (MQ=255)


                                                                                           cccc.GGC..GGGG..GCTC..CGCCCCCGCACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCGGGCCCCtt      <  1:350142/100‑1 (MQ=255)


                                                                                            ccc.GGC..GGGG..GCTC..CGCCCCCGCACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCGGGCCCCttt     <  1:917862/101‑1 (MQ=255)


                                                                                            ccc.GGC..GGGG..GCTC..CGCCCCCGCACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCGGGCCCCttt     <  2:2821823/101‑1 (MQ=255)


                                                                                             cc.GGC..GGGG..GCTC..CGCCCCCGCACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCGGGCCCCtttt    <  2:3091698/101‑1 (MQ=255)


                                                                                              c.ggc..ggGG..GCTC..CGCCCCCGCACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCGGGCCCCTTTTa   <  1:3166276/101‑1 (MQ=255)


                                                                                                ggc..ggGG..GCTC..CGCCCCCGCACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCCGGCCCCTTTTAt  >  1:2662167/1‑101 (MQ=37)


AAAAGCAGATCTGACATCGCGATGAAACGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCC.GGC..GGGG..G..C..CGCCCCCGCACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCGGGCCCCTTTTAT  >  NC_014034/2577065‑2577258

Base quality scores:


ATCG

< 3 ≤


ATCG

< 18 ≤


ATCG

< 27 ≤


ATCG

< 33 ≤


ATCG

< 40 ≤


ATCG