BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	1395832 =	197 (1.180)	45 (0.270)	10/136	17.9	0.14	intergenic (+644/‑287)	RCAP_rcc01306/RCAP_rcc01307	Cas2 family CRISPR‑associated protein/hypothetical protein
*	?	NC_014034	= 1396937	365 (1.490)	45 (0.270)	10/136	17.9	0.14	coding (819/1578 nt)	RCAP_rcc01307	hypothetical protein
Rejected: Position hash score below cutoff.

Only 100 of 458 total aligned reads displayed.


TCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGGTCCAGAGATAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.A.GCCT.GCGCG.GC.CGCA..TCGGCT.TCCGC.CTG..CG.TG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCGTCGTTGGTCAGCCGGACGATGTCCGTCG  >  NC_014034/1396837‑1397037


tCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGGTCCAGAGATAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.A.Gc                                                                                                                 >  1:3512839/1‑101 (MQ=255)


  gCTCCCCCCGCGGGGGCGTGGATCGAAACCGGTCCAGAGATAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.A.GCCt                                                                                                               <  2:4744704/101‑1 (MQ=255)


   cTCCCCCCGCGGGGGCGTGGATCGAAACCGGTCCAGAGATAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.A.GCCT.g                                                                                                             <  1:1041585/101‑1 (MQ=255)


   cTCCCCCCGCGGGGGCGTGGATCGAAACCGGTCCAGAGATAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.A.GCCT.g                                                                                                             <  2:813462/101‑1 (MQ=255)


    cccccccGCGGGGGCGTGGATCGAAACCGGTCCAGAGATAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.A.GCCT.gc                                                                                                            <  2:3217378/100‑1 (MQ=255)


             gggggCGTGGATCGAAACCGGTCCAGAGATAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.A.GCCT.GCGCG.GC.CGCa                                                                                                 >  2:3626967/1‑101 (MQ=255)


             gggggCGTGGATCGAAACCGGTCCAGAGATAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.A.GCCT.GCGCG.GC.CGCa                                                                                                 >  1:2959220/1‑101 (MQ=255)


             gggggCGTGGATCGAAACCGGTCCAGAGATAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.A.GCCT.GCGCG.GC.CGCa                                                                                                 >  1:703835/1‑101 (MQ=255)


              ggggCGTGGATCGAAACCGGTCCAGAGATAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.A.GCCT.GCGCG.GC.CGCA..t                                                                                              <  1:4668657/101‑1 (MQ=255)


               gggCGTGGATCGAAACCGGTCCAGAGATAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.A.GCCT.GCGCG.GC.CGCA..Tc                                                                                             <  2:2157452/101‑1 (MQ=255)


               gggCGTGGATCGAAACCGGTCCAGAGATAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.A.GCCT.GCGCG.GC.CGCA..Tc                                                                                             <  2:1724295/101‑1 (MQ=255)


                  cGTGGATCGAAACCGGTCCAGAGATAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.A.GCCT.GCGCG.GC.CGCA..TCGGc                                                                                          >  2:439317/1‑101 (MQ=255)


                  cGTGGATCGAAACCGGTCCAGAGATAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.A.GCCT.GCGCG.GC.CGCA..TCGGc                                                                                          >  2:3322895/1‑101 (MQ=255)


                   gTGGATCGAAACCGGTCCAGAGATAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.A.GCCT.GCGCG.GC.CGCA..TCGGCt                                                                                         <  1:2436319/101‑1 (MQ=255)


                   gTGGATCGAAACCGGTCCAGAGATAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.A.GCCT.GCGCG.GC.CGCA..TCGGCt                                                                                         >  2:2364252/1‑101 (MQ=255)


                    tGGATCGAAACCGGTCCAGAGATAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.A.GCCT.GCGCG.GC.CGCA..TCGGCt.t                                                                                       >  1:4414915/1‑101 (MQ=255)


                    tGGATCGAAACCGGTCCAGAGATAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.A.GCCT.GCGCG.GC.CGCA..TCGGCt.t                                                                                       >  2:958840/1‑101 (MQ=255)


                     ggATCGAAACCGGTCCAGAGATAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.A.GCCT.GCGCG.GC.CGCA..TCGGCT.Tc                                                                                      >  2:2689207/1‑101 (MQ=255)


                      gATCGAAACCGGTCCAGAGATAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.A.GCCT.GCGCG.GC.CGCA..TCGGCT.Tca                                                                                     >  1:3671096/1‑100 (MQ=255)


                       aTCGAAACCGGTCCAGAGATAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.A.GCCT.GCGCG.GC.CGCA..TCGGCT.TCCg                                                                                    >  2:4124382/1‑101 (MQ=255)


                         cGAAACCGGTCCAGAGATAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.A.GCCT.GCGCG.GC.CGCA..TCGGCT.TCCGc.c                                                                                 >  1:4975406/1‑101 (MQ=255)


                         cGAAACCGGTCCAGAGATAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.A.GCCT.GCGCG.GC.CGCA..TCGGCT.TCCGc.c                                                                                 <  1:3593500/101‑1 (MQ=255)


                            aaCCGGTCCAGAGATAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.A.GCCT.GCGCG.GC.CGCA..TCGGCT.TCCGC.CTG..c                                                                            >  1:4145564/1‑101 (MQ=255)


                                ggTCCAGAGATAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.A.GCCT.GCGCG.GC.CGCA..TCGGCT.TCCGC.CCG..CG.Tg.g                                                                      >  2:1399264/1‑101 (MQ=255)


                                 gTCCAGAGATAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.A.GCCT.GCGCG.GC.CGCA..TCGGCT.TCCGC.CCG..CG.TG.Gt                                                                     >  1:2327877/1‑101 (MQ=255)


                                   ccAGAGATAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.A.GCCT.GCGCG.GC.CGCA..TCGGCT.TGCGC.CCG..CG.TG.GTCg                                                                   >  2:2844613/1‑101 (MQ=255)


                                     agagATAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.A.GCCT.GCGCG.GC.CGCA..TCGGCT.TCCGC.CTG..CG.TG.GTCGCt                                                                 <  2:3512569/101‑1 (MQ=255)


                                     agagATAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.A.GCCT.GCGCG.GC.CGCA..TCGGCT.TCCGC.CTG..CG.TG.GTCGCt                                                                 >  1:1299497/1‑101 (MQ=255)


                                       agaTAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.A.GCCT.GCGCG.GC.CGCA..TCGGCT.TCCGC.CTG..CG.TG.GTCGCTcc                                                               >  2:1233636/1‑101 (MQ=255)


                                        gaTAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.A.GCCT.GCGCG.GC.CGCA..TCGGCT.TCCGC.CCG..CG.Gg.ggccccccc                                                              >  1:3424814/1‑93 (MQ=37)


                                           aGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.A.GCCT.GCGCG.GC.CGCA..TCGGCT.TCCGC.CTG..CG.TG.GTCGCTcccccc                                                           <  2:3374768/101‑1 (MQ=255)


                                           aGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.A.GCCT.GCGCG.GC.CGCA..TCGGCT.TCCGC.CTG..CG.TG.GTCGCTcccccc                                                           <  2:228429/101‑1 (MQ=255)


                                           aGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.A.GCCT.GCGCG.GC.CGCA..TCGGCT.TCCGC.CTG..CG.TG.GTCGCTcccccc                                                           <  2:5028414/101‑1 (MQ=255)


                                            gACCGCGCGGACCTCCTCAGACGTCGCTCCCGCCGCGGGGGCGTGGATCGAAAC.A.GCCT.GCGCG.GC.CGCA..TCGGCT.TCCGC.CTG..CG.TG.GTCGCTCCCCCcg                                                          >  1:4485513/1‑101 (MQ=255)


                                            gACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.A.GCCT.GCGCG.GC.CGCA..TCGGCT.TCCGC.CTG..CG.TG.GGCGCTCCCCCcg                                                          >  2:4440185/1‑101 (MQ=255)


                                             aCCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.A.GCCT.GCGCG.GC.CGCA..TCGGCT.TCCGC.CTG..CG.TG.GTCGCTCCCCCcgc                                                         >  1:196578/1‑101 (MQ=255)


                                                     gACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.A.GCCT.GCGCG.GC.CGCA..TCGGCT.TCCGC.CTG..CG.TG.GTCGCTCCCCCCGCGGGGGCGt                                                 <  2:1809747/101‑1 (MQ=255)


                                                        tcgcggttgcGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.ATGGCTATGGCG.GC.AGTG..TCAGGT.T.TTC.CAG..CG.GC.GTCGCTCCCCCCGCGGGGGCGTgg                                               <  2:1455824/92‑1 (MQ=0)


                                                        ctcctcAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.A.GCCT.GCGCG.GC.CGCA..TCGGCT.TCCGC.CTG..CG.TG.GTCGCTCCCCCCGCGGGGGCGTGGa                                              <  1:2808515/101‑1 (MQ=255)


                                                         tcctcAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.A.GCCT.GCGCG.GC.CGCA..TCGGCT.TCCGC.CTG..CG.TG.GTCGCTCCCCCCCCGGGGGCCTgggt                                             >  1:4765541/1‑99 (MQ=255)


                                                          tggccccgggcGCTCCCCCCGCGGGGGCGTGGATCGAAAC.A..ACT.GACC...C.GGCA..ACGGCC.TATGCGCTGGACG.TG.GTCGCTCCCCCCGCGGGGGCGTGGATc                                            <  1:29207/91‑1 (MQ=2)


                                                          tcaccactgTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC...GCTG.GCGCGCGC.CGCG..CCGGATCTTTGT.CTG..CG.CG.GTCGCTCCCCCCGCGGGGGCGTGGAt                                             <  1:1344756/93‑1 (MQ=9)


                                                          cctcgcaCGTCGGCCCCCCCGCCGGGGCGTGGATGGAAGCAA.TGCG.GCGCG.GG.CCCA..T.GGCT.GCCGG.ACC..CGCCC.GTCGCTCCCCCCGCGGGGGCGTGGAt                                             <  2:4801567/95‑1 (MQ=0)


                                                          cctcAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.A.GCCT.GCGCG.GC.CGCA..TCGGCT.TCCGC.CTG..CG.TG.GTCGCTCCCCCCGCGGGGGCGTGGATc                                            <  1:579960/101‑1 (MQ=255)


                                                           ggccccggTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.A..ACT.GACC...C.GGCA..ACGGCC.TATGCGCTGGACG.TG.GTCGCTCCCCCCGCGGGGGCGTGGATCg                                           >  1:2031600/8‑101 (MQ=2)


                                                           ctcAGACGTCGCCCCCCCCGCGGGGGCGTGGATCGAAAC.A.GCCT.GCGCG.GC.CGCA..TCGGCT.TCCGC.CTG..CG.TG.GTCGCTCCCCCCGCGGGGGCATGGATCg                                           <  2:3920075/101‑1 (MQ=255)


                                                           cggttgcGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.ATGGCTATGGCG.GC.AGTG..TCAGGT.T.TTC.CAG..CG.GC.GTCGCTCCCCCCGCGGGGGCGTGGATc                                            <  2:4939102/95‑1 (MQ=2)


                                                           cggttgcGTCGCGCCCCCCGCGGGGGCGTGGATCGAAAC.ATGGCTATGGCG.GC.AGTG..TCAGGT.T.TTC.CAG..CG.GC.GTCGCTCCCCCCGCGGGGGCGTGGATc                                            <  1:1431807/95‑1 (MQ=2)


                                                            tcAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.A.GCCT.GCGCG.GC.CGCA..TCGGCT.TCCGC.CTG..CG.TG.GTCGCTCCCCCCGCGGGGGCGGGGATCGa                                          >  1:3802797/1‑101 (MQ=255)


                                                            ggttgcGTCGCGCCCCCCGCGGGGGCGTGGATCGAAAC.ATGGCTATGGCG.GC.AGTG..TCAGGT.T.TTC.CAG..CG.GC.GTCGCTCCCCCCGCGGGGGCGTGGATCg                                           <  2:1666920/96‑1 (MQ=2)


                                                            aacactgTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC...GCTG.GCGCGCGC.CGCG..CCGGATCTTTGT.CTG..CG.CG.GTCGCTCCCCCCGCGGGGGCGTGGATCg                                           >  1:4290267/7‑101 (MQ=9)


                                                            aacactgTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC...GCTG.GCGCGCGC.CGCG..CCGGATCTTTGT.CTG..CG.CG.GTCGCCCCCCCCGCGGGGGGGGGGGTCg                                           >  1:3902051/7‑101 (MQ=2)


                                                             ccccggTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.A..ACT.GACC...C.GGCA..ACGGCC.TATGCGCTGGACG.TG.GTCGCTCCCCCCGCGGGGGCGTGGATCGaa                                         <  2:4591282/96‑1 (MQ=2)


                                                             cAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.A.GCCT.GCGCG.GC.CGCA..TCGGCT.TCCGC.CTG..CG.TG.GTCGCTCCCCCCGCGGGGGCGTGGATCGaa                                         <  2:3157727/101‑1 (MQ=255)


                                                             cAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.A.GCCT.GCGCG.GC.CGCA..TCGGCT.TCCGC.CTG..CG.TG.GTCGCTCCCCCCGCGGGGGCGTGGATCGaa                                         <  1:1845182/101‑1 (MQ=255)


                                                             cAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.A.GCCT.GCGCG.GC.CGCA..TCGGCT.TCCGC.CTG..CG.TG.GTCGCTCCCCCCGCGGGGGCGGGGATCGaa                                         >  1:635910/1‑101 (MQ=255)


                                                             acactgTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC...GCTG.GCGCGCGC.CGCG..CCGGATCTTTGT.CTG..CG.CG.GTCGCTCCCCCCGCGGGGGCGTGGATCGa                                          >  1:4947849/6‑101 (MQ=9)


                                                              gcccGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.T.GCGT.GCGCG.CCATGAAT.TCATCG.AGCGC.CAT..CG.AGCGTCGCTCCCCCCGCGGGGGCGTGGATCg                                           >  2:4175570/4‑101 (MQ=2)


                                                              cccggTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.A..ACT.GACC...C.GGCA..ACGGCC.TATGCGCTGGACG.TG.GTCGCTCCCCCCGCGGGGGCGTGGATCGaaa                                        <  1:903933/97‑1 (MQ=2)


                                                               tgcGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.ATGGCTATGGCG.GC.AGTG..TCAGGT.T.TTC.CAG..CG.GC.GGCGCTCCCCCCGCGGGGGCGTGGATCGaaa                                        >  2:290430/3‑101 (MQ=2)


                                                               gACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.A.GCCT.GCGCG.GC.CGCA..TCGGCT.TCCGC.CTG..CG.TG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAAc                                       <  1:3771865/101‑1 (MQ=255)


                                                               actgTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC...GCTG.GCGCGCGC.CGCG..CCGGATCTTTGT.CTG..CG.CG.GTCGCTCCCCCCGCGGGGGCGTGGATCGaaa                                        >  1:1898214/4‑101 (MQ=9)


                                                                cggTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.A..ACT.GACC...C.GGCA..ACGGCC.TATGCGCTGGACG.TG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAAct                                      >  2:3058242/3‑100 (MQ=2)


                                                                 tgTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC...GCTG.GCGCGCGC.CGCG..CCGGATCTTTGT.CTG..CG.CG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAAct                                      >  1:1780662/2‑100 (MQ=9)


                                                                 cGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.T.GCGT.GCGCG.CCATGAAT.TCATCG.AGCGC.CAT..CG.AGCGTCGCTCCCCCCGCGGGGGCGTGGATCGaaa                                        <  1:2838087/101‑1 (MQ=2)


                                                                  gTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.ATGGCTATGGCG.GC.AGTG..TCAGGT.T.TTC.CAG..CG.GC.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAAccc                                     <  2:1090364/101‑3 (MQ=2)


                                                                  gTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.A.GCCT.GCGCG.GC.CGCA..TCGGCT.TCCGC.CTG..CG.TG.GTCGCTCCCCCCGCGGGGGCGTGGGTCGAAACATc                                    >  2:1004889/1‑101 (MQ=255)


                                                                  gTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC...GCTG.GCGCGCGC.CGCG..CCGGATCTTTGT.CTG..CG.CG.GTCGCTCCCCCCGCGGGGGCGCGGATCGAAActc                                     >  1:1664245/1‑99 (MQ=9)


                                                                  gTCGCCCCCCCCGCGGGGGCGTGGATCGAAAC.A.GCCT.GCGCG.GC.CGCA..TCGGCT.TCCGC.CTG..CG.TG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATc                                    <  1:2606720/101‑1 (MQ=255)


                                                                   tCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.T.GCGT.GCGCG.CCATGAAT.TCATCG.AGCGC.CAT..CG.AGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACa                                      <  2:3735872/101‑1 (MQ=2)


                                                                   tCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.A.GCCT.GCGCG.GC.CGCA..TCGGCT.TCCGC.CTG..CG.TG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCa                                   >  1:4860951/1‑101 (MQ=255)


                                                                   tCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.A.GCCT.GCGCG.GC.CGCA..TCGGCT.TCCGC.CTG..CG.TG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCa                                   <  1:2667094/101‑1 (MQ=255)


                                                                   tCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.A..ACT.GACC...C.GGCA..ACGGCC.TATGCGCTGGACG.TG.GTCGCTCCCACCGCGGGGGCGTGGATCGAAActaca                                   >  1:4238981/1‑97 (MQ=2)


                                                                    cGCTCCCCCCGCGGGGGCGTGGATCGAAAC.A.GCCT.GCGCG.GC.CGCA..TCGGCT.TCCGC.CTG..CG.TG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAg                                  >  2:1351571/1‑101 (MQ=255)


                                                                    cGCTCCCCCCGCGGGGGCGTGGATCGAAAC.A..ACT.GACC...C.GGCA..ACGGCC.TATGCGCTGGACG.TG.GTCGCTCCCCCCGCGGGTGCGTGGATCGAAActaaac                                  >  2:4009691/1‑96 (MQ=2)


                                                                    cGCTCCCCCCGCGGGGGCGTGGATCGAAAC...GCTG.GCGCGCGC.CGCG..CCGGATCTTTGT.CTG..CG.CG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAActcgg                                   >  1:2176174/1‑97 (MQ=9)


                                                                     gCTCCCCCCGCGGGGGCGTGGATTGAAAC.A.GCCT.GCGCG.GC.CGCA..TCGGCT.TCCGC.CTG..CG.TG.GTCGATCCCCCCGCGGGGGGGTGGTTCGAAACATAAGc                                 >  1:4064415/1‑101 (MQ=37)


                                                                      cTCCCCCCGCGGGGGCGTGGATCGAAAC.T.GCGT.GCGCG.CCATGAAT.TCATCG.AGCGC.CAT..CG.AGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCa                                   <  2:2053069/101‑1 (MQ=2)


                                                                      cTCCCCCCGCGGGGGCGTGGATCGAAAC.A.GCCT.GCGCG.GC.CGCA..TCGGCT.TCCGC.CTG..CG.TG.GTCGCTCCCTCCGCGGGGGCGTGGATCGAAACATCAGCt                                <  2:468931/101‑1 (MQ=255)


                                                                      cTCCCCCCGCGGGGGCGTGGATCGAAAC.A.GCCT.GCGCG.GC.CGCA..TCGGCT.TCCGC.CTG..CG.TG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCATCt                                >  2:1133706/1‑101 (MQ=255)


                                                                       tCCCCCCGCGGGGGCGTGGATCGAAAC.A.CCCG.GCGCC.GC.AGCG..AGTGCG.TCTGA.ACA..GG.AT.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAActatgctgg                               >  2:2807018/1‑93 (MQ=2)


                                                                       tCCCCCCGCGGGGGCGTGGATCGAAAC.A..ACT.GACC...C.GGCA..ACGGCC.TATGCGCTGGACG.TG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAActacaccgg                               >  1:322135/1‑93 (MQ=2)


                                                                       cccccccGCGGGGGCGTGGATCGAAAC.T.GCGT.GCGCG.CCATGAAT.TCATCG.AGCGC.CAT..CG.AGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCaa                                  <  1:223403/100‑2 (MQ=2)


                                                                        ccccccGCGGGGGCGTGGATCGAAAC.T.GCGT.GCGCG.CCATGAAT.TCATCG.AGCGC.CAT..CG.AGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCaat                                 <  1:313218/101‑3 (MQ=2)


                                                                        ccccccGCGGGGGCGTGGATCGAAAC.T.GCGT.GCGCG.CCATGAAT.TCATCG.AGCGC.CAT..CG.AGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCaat                                 <  1:1519451/101‑3 (MQ=2)


                                                                        ccccccGCGGGGGCGTGGATCGAAAC.A..ACT.GACC...C.GGCA..ACGGCC.TATGCGCTGGACG.TG.GTCGCTCCCCCCGCGGGGGCGTGGGTCGaaaatacaccggg                              >  2:1955271/1‑91 (MQ=2)


                                                                        ccccccGCGGGGGCGTGGATCGAAAC.A..ACT.GACC...C.GGCA..ACGGCC.TATGCGCTGGACG.TG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAActacaccggg                              >  2:2969986/1‑92 (MQ=2)


                                                                        ccccccGCGGGGGCGTGGATCGAAAC.A..ACT.GACC...C.GGCA..ACGGCC.TATGCGCTGGACG.TG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAActacaccggg                              >  1:1484403/1‑92 (MQ=2)


                                                                        ccccccGCGGGGGCGTGGATCGAAAC...GCTG.GCGCGCGC.CGCG..CCGGATCTTTGT.CTG..CG.CG.GTCGCTCCCCCCGCGGGGGCGTGGCTCGAAActcggcctc                               >  2:664684/1‑93 (MQ=9)


                                                                         cccccGCGGGGGCGTGGATCGAAAC.ATGGCTATGGCG.GC.AGTG..TCAGGT.T.TTC.CAG..CG.GC.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAAcccgccacgc                              >  1:2290327/1‑92 (MQ=2)


                                                                          ccccGCGGGGGCGTGGATCGAAAC.T.GCGT.GCGCG.CCATGAAT.TCATCG.AGCGC.CAT..CG.AGCGTCGCTCCCCCCGCGGGGGCGTGGATCGaaaaaccaatgc                               >  2:2444389/1‑92 (MQ=2)


                                                                          ccccGCGGGGGCGTGGATCGAAAC.T.GCGT.GCGCG.CC.ATGAGTTCATCG.AGCGC.CAT..CG.AGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCaatgc                               <  2:4299223/101‑5 (MQ=0)


                                                                          ccccGCGGGGGCGTGGATCGAAAC.A.GCCT.GCGCG.GC.CGCA..TCGGCT.TCCGC.CTG..CG.TG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCtcgtc                            <  2:1537314/101‑1 (MQ=255)


                                                                            ccGCGGGGGCGTGGATCGAAAC.T.GCGT.GCGCG.CCATGAAT.TCATCG.AGCGC.CAT..CG.AGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCaatgccg                             <  1:1141240/101‑7 (MQ=0)


                                                                             cgcgGGGGCGTGGATCGAAAC.A.GCCT.GCGCG.GC.CGCA..TCGGCT.TCCGC.CTG..CG.TG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCGTCGtt                         <  1:3333269/101‑1 (MQ=255)


                                                                                gggggCGTGGATCGAAAC.A.GCCT.GCGCG.GC.CGCA..TCGGCT.TCCGC.CTG..CG.TG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCGTCGTTGGt                      <  2:2651635/101‑1 (MQ=255)


                                                                                gggggCGTGGATCGAAAC.A.GCCT.GCGCG.GC.CGCA..TCGGCT.TCCGC.CTG..CG.TG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCGTCGTTGGt                      >  1:4004196/1‑101 (MQ=255)


                                                                                     ggTGGATAGAAAC.A.GCCT.GCGCG.GC.CGCA..TCGGCT.TCCGC.CTG..CG.TG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCGTCGTTGGTCAGcc                 <  2:747199/100‑1 (MQ=255)


                                                                                      gTGGATCGAAAC.A.GCCT.GCGCG.GC.CGCA..TCGGCT.TCCGC.CTG..CG.TG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCGTCGTTggacgccga                >  1:2120748/1‑94 (MQ=255)


                                                                                             gAAAC.A.GCCT.GCGCG.GC.CGCA..TCGGCT.TCCGC.CTG..CG.TG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCGTCGTTGGTCAGCCGGACGATg         <  1:771636/101‑1 (MQ=255)


TCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGGTCCAGAGATAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.A.GCCT.GCGCG.GC.CGCA..TCGGCT.TCCGC.CTG..CG.TG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCGTCGTTGGTCAGCCGGACGATGTCCGTCG  >  NC_014034/1396837‑1397037

Base quality scores:


ATCG

< 3 ≤


ATCG

< 20 ≤


ATCG

< 27 ≤


ATCG

< 33 ≤


ATCG

< 40 ≤


ATCG