New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 1396639 =186 (1.170)67 (0.420) 8/130 18.6 0.27 coding (521/1578 nt) RCAP_rcc01307 hypothetical protein
?NC_014034 = 1434909 176 (0.720)intergenic (‑688/‑270) RCAP_rcc01334/RCAP_rcc01335 hypothetical protein/Fis family GAF modulated sigma54 specific transcriptional regulator
Rejected: Position hash score below cutoff.

Only 100 of 284 total aligned reads displayed.

CCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATGGAAAACCGCGGCTTCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCGGGTTTCGCGGCCGATGCGGCTCCCGAAGTGATCAAGGCTGGTGCGCGCAAATCCATCGAGCCAATCGGGCGCCCAAC  >  NC_014034/1434809‑1435009
                                                                                                    |                                                                                                    
 cTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATGGAAAACCGCGGCTTCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAcc                                                                                                     >  2:1450794/1‑101 (MQ=255)
  ttGTCGCTCCCCTCGCGGGGGCGTGGATCGAAACATGGAAAACCGCGGCTTCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCg                                                                                                    >  1:2746538/1‑101 (MQ=255)
   tGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATGGAAAACCGCGGCTTCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGt                                                                                                   >  2:733924/1‑101 (MQ=255)
   tGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATGGAAAACCGCGGCTTCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGt                                                                                                   >  2:2857057/1‑101 (MQ=255)
    gTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATGGAAAACCGCGGCTTCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTg                                                                                                  <  1:2998113/101‑1 (MQ=255)
    gTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATGGAAAACCGCGGCTTCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTg                                                                                                  <  1:1695511/101‑1 (MQ=255)
    gTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATGGAAAACCGCGGCTTCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTg                                                                                                  >  1:3764786/1‑101 (MQ=255)
    gTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATGGAAAACCGCGGCTTCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGGGGATCGAAACCGTg                                                                                                  >  1:4744857/1‑101 (MQ=255)
      cGCTCCCCCCGCGGGGGCGTGGATCGAAACATGGAAAACCGCGGCTTCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGAt                                                                                                >  2:556093/1‑101 (MQ=255)
       gCTCCCCCCGCGGGGGCGTGGATCGAAACATGGAAAACCGCGGCTTCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATg                                                                                               >  1:1561591/1‑101 (MQ=255)
        cTCCCCCCGCGGGGGCGTGGATCGAAACATGGAAAACCGCGGCTTCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGc                                                                                              <  2:3560602/101‑1 (MQ=255)
          ccccccGCGGGGGCGTGGATCGAAACATGGAAAACCGCGGCTTCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGt                                                                                            <  2:334714/101‑1 (MQ=255)
          ccccccGCGGGGGCGTGGATCGAAACATGGAAAACCGCGGCTTCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGt                                                                                            >  2:1232673/1‑101 (MQ=255)
               cgcgGGGGCGTGGATCGAAACATGGAAAACCGCGGCTTCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCg                                                                                       >  2:3610307/1‑101 (MQ=255)
                gcgGGGGCGTGGATCGAAACATGGAAAACCGCGGCTTCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGa                                                                                      <  2:2124726/101‑1 (MQ=255)
                  gggggCGTGGATCGAAACATGGAAAACCGCGGCTTCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATc                                                                                    >  2:2481822/1‑101 (MQ=255)
                  gggggCGTGGATCGAAACATGGAAAACCGCGGCTTCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGGGATGCGTGCCCGGTc                                                                                    >  1:4147810/1‑101 (MQ=255)
                  gggggCGTGGATCGAAACATGGAAAACCGCGGCTTCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGGGGATCGAAACCGCGATGCGTGCCCCATc                                                                                    >  1:110255/1‑101 (MQ=255)
                   ggggCGTGGATCGAAACATGGAAAACCGCGGCTTCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATcc                                                                                   >  1:2115918/1‑101 (MQ=255)
                   ggggCGTGGATCGAAACATGGAAAACCGCGGCTTCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGTGATGCGTGCCCGATcc                                                                                   >  2:859835/1‑101 (MQ=255)
                    gggCGTGGATCGAAACATGGAAAACCGCGGCTTCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATTCGTGCCCGATcct                                                                                  >  2:3680925/1‑100 (MQ=255)
                     ggCGTGGATCGAAACATGGAAAACCGCGGCTTCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCAt                                                                                 <  2:4504352/101‑1 (MQ=255)
                      gCGTGGATCGAAACATGGAAAACCGCGGCTTCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATc                                                                                <  1:2207600/101‑1 (MQ=255)
                      gCGTGGATCGAAACATGGAAAACCGCGGCTTCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATc                                                                                <  2:1698099/101‑1 (MQ=255)
                         tGGATCGAAACATGGAAAACCGCGGCTTCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCggg                                                                             >  1:3124322/1‑101 (MQ=255)
                         tGGATCGAAACATGGAAAACCGCGGCTTCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCggg                                                                             >  2:4453566/1‑101 (MQ=255)
                         tGGATCGAAACATGGAAAACCGCGGCTTCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCggg                                                                             <  1:1768445/101‑1 (MQ=255)
                          ggATCGAAACATGGAAAACCGCGGCTTCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCggga                                                                            >  2:1768315/1‑100 (MQ=255)
                            aTCGAAACATGGAAAACCGCGGCTTCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCGGGttt                                                                          <  1:3597641/101‑1 (MQ=255)
                             tCGAAACATGGAAAACCGCGGCTTCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCGGGTTTc                                                                         >  1:3079626/1‑101 (MQ=255)
                              cGAAACATGGAAAACCGCGGCTTCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCGGGTTTcg                                                                        <  2:76785/101‑1 (MQ=255)
                              cGAAACATGGAAAACCGCGGCTTCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCGGGTTTcg                                                                        <  2:2933445/101‑1 (MQ=255)
                              cGAAACATGGAAAACCGCGGCTTCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCGGGTTTcg                                                                        <  1:3526882/101‑1 (MQ=255)
                                aaaCATGGAAAACCGCGGCTTCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCGGGTTTcgcg                                                                      >  1:828425/1‑101 (MQ=255)
                                  aCATGGAAAACCGCGGCTTCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCGGGTTTCGCGGc                                                                    <  2:1130315/101‑1 (MQ=255)
                                    aTGGGAAACCGCGGCTTCACCGCGCGGGATTGGGTCGCCCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCGGGTTTCGCGGCCg                                                                  <  1:2500044/101‑1 (MQ=255)
                                     tGGAAAACCGCGGCTTCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCGGGTTTCGCGGCCGa                                                                 <  1:3207872/101‑1 (MQ=255)
                                      ggAAAACCGCGGCTTCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCGGGTTTCGCGGCCGAt                                                                <  1:2623422/101‑1 (MQ=255)
                                       gAAAACCGCGGCTTCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCGGGTTTCGCGGCCGATg                                                               >  2:3214436/1‑101 (MQ=255)
                                       gAAAACCGCGGCTTCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCGGGTTTCGCGGCCGATg                                                               >  1:987130/1‑101 (MQ=255)
                                        aaaaCCGCGGCTTCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCGGGTTTCGCGGCCGATgg                                                              >  1:2832331/1‑100 (MQ=255)
                                         aaaCCGCGGCTTCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCGGGTTTCGCGGCCGATGCg                                                             >  2:4342740/1‑101 (MQ=255)
                                         aaaCCGCGGCTTCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCGGGTTTCGCGGCCGATGCg                                                             >  2:1518709/1‑101 (MQ=255)
                                          aaCCGCGGCTTCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCGGGTTTCGCGGCCGATGCgg                                                            >  2:4597991/1‑101 (MQ=255)
                                          aaCCGCGGCTTCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCGGGTTTCGCGGCCGATGCgg                                                            <  1:952826/101‑1 (MQ=255)
                                              gcgGCTTCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCGGGTTTCGCGGCCGATGCGGCTcc                                                        >  1:1022962/1‑101 (MQ=255)
                                                 gCTTCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCGGGTTTCGCGGCCGATGCGGCTCCCGa                                                     <  2:564415/101‑1 (MQ=255)
                                                   ttCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCGGGTTTCGCGGCCGATGCGGCTCCCGAAg                                                   >  1:1316591/1‑101 (MQ=255)
                                                    tCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGTGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCGGGTTTCGCGGCCGATGCGGCTCCCGAAGt                                                  <  1:4389333/101‑1 (MQ=255)
                                                     cACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCGGGTTTCGCGGCCGATGCGGCTCCCGAAggg                                                 >  2:673834/1‑99 (MQ=255)
                                                     cACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCGGGTTTCGCGGCCAATGCGGCTCCCGAAGTg                                                 >  2:182467/1‑101 (MQ=255)
                                                      aCCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCGGGTTTCGCGGCCGATGCGGCTCCCGAAGTGa                                                >  2:2440461/1‑101 (MQ=255)
                                                       ccGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCGGGTTTCGCGGCCGATGCGGCTCCCGAAGTGAt                                               >  1:590415/1‑101 (MQ=255)
                                                        cgcgcgGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCGGGTTTCGCGGCCGATGCGGCTCCCGAAGTGATc                                              <  1:2689839/101‑1 (MQ=255)
                                                         gcgcgGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCGGGTTTCGCGGCCGATGCGGCTCCCGAAGTGATCa                                             <  2:3128195/101‑1 (MQ=255)
                                                          cgcgGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCGGGTTTCGCGGCCGATGCGGCTCCCGAAGTGATCaa                                            <  2:3494916/101‑1 (MQ=255)
                                                             gggATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCGGGTTTCGCGGCCGATGCGGCTCCCGAAGTGATCAAGGc                                         <  1:1795826/101‑1 (MQ=255)
                                                             gggATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCGGGTTTCGCGGCCGATGCGGCTCCCGAAGTGATCAAAGc                                         >  1:3844654/1‑101 (MQ=255)
                                                              ggATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCGGGTTTCGCGGCCGATGCGGCTCCCGAAGTGATCAAGGCt                                        <  2:3950768/101‑1 (MQ=255)
                                                               gATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCGGGTTTCGCGGCCGATGCGGCTCCCGAAGTGATCAAGGCTg                                       <  1:229360/101‑1 (MQ=255)
                                                                aTTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCACGATCCATCGGGTTTCGCGGCCGATGCGGCTCCCGAAGGGATCAAGGCTgg                                      >  2:2842941/1‑101 (MQ=255)
                                                                 ttGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCGGGTTTCGCGGCCGATGCGGCTCCCGAAGTGATCAAGGCTggg                                     >  2:4706606/1‑100 (MQ=255)
                                                                 ttGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCGGGTTTCGCGGCCGATGCGGCTCCCGAAGTGATCAAGGCTggg                                     >  1:403813/1‑100 (MQ=255)
                                                                  tGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCGGGTTTCGCGGCCGATGCGGCTCCCGAAGTGATCAAGGCTgggg                                    >  1:153518/1‑99 (MQ=255)
                                                                  tGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCGGGTTTCGCGGCCGATGCGGCTCCCGAAGCGATCAAGGCTGGTg                                    >  2:1993779/1‑101 (MQ=255)
                                                                   gggTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCGGGTTTCGCGGCCGATGCGGCTCCCGAAGTGATCAAGGCTGGTgc                                   >  2:141121/1‑101 (MQ=255)
                                                                   gggTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCGGGTTTCGCGGCCGATGCGGCTCCCGAAGTGATCAAGGCTGGGgc                                   >  1:3157388/1‑101 (MQ=255)
                                                                      tCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCGGGTTTCGCGGCCGATGCGGCTCCCGAAGTGATCAAGGCTGGTgcgcg                                >  1:563590/1‑101 (MQ=255)
                                                                        gCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCGGGTTTCGCGGCCGATGCGGCTCCCGAAGTGGTCAAGGCTGGTgcgggga                              >  1:4459658/1‑97 (MQ=255)
                                                                        gCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCGGGTTTCGCGGCCGATGCGGCTCCCGAAGTGATCAAGGCTGGTgggcgga                              >  2:3906797/1‑99 (MQ=255)
                                                                        gCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCGGGTTTCGCGGCCGATGCGGCTCCCGAAGTGATCAAGGCTGGTGCGCGCa                              <  1:371975/101‑1 (MQ=255)
                                                                        gCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCGGGTTTCGCGGCCGATGCGGCTCCCGAAGTGATCAAGGCTGGTGCGCGCa                              >  2:2690077/1‑101 (MQ=255)
                                                                         cTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCGGGTTTCGCGGCCGATGCGGCTCCCGAAGTGATCAAGGCTGGTGCGCGCaa                             >  1:3920958/1‑101 (MQ=255)
                                                                         cTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCGGGTTTCGCGGCCGATGCGGCTCCCGAAGTGATCAAGGCTGGTGCGCGCaa                             >  1:4560278/1‑101 (MQ=255)
                                                                            cccccGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCGGGTTTCGCGGCCGATGCGGCTCCCGAAGTGATCAAGGCTGGTGCGCGCAAATc                          <  2:924069/101‑1 (MQ=255)
                                                                             ccccGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCGGGTTTCGCGGCCGATGCGGCTCCCGAAGTGATCAAGGCTGGTGCGCGCAAATcc                         >  2:4918845/1‑101 (MQ=255)
                                                                             ccccGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCGGGTTTCGCGGCCGATGCGGCTCCCGAAGTGATCAAGGCTGGTGCGCGCAAATcc                         <  1:1450921/101‑1 (MQ=255)
                                                                              cccGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCGTGTTTCGCGGCCGATGCGGCTCCCGAAGTGATCAAGGCTGGTGCGCGCAAATCCa                        <  2:4994058/101‑1 (MQ=255)
                                                                                 gcgGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCGGGTTTCGCGGCCGATGCGGCTCCCGAAGTGATCAAGGCTGGTGCGCGCAAATCCATCg                     <  2:3764501/101‑1 (MQ=255)
                                                                                 gcgGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCGGGTTTCGCGGCCGATGCGGCTCCCCACGCGATCAAGGCTGGTGCGCGCGAAGCCATCg                     >  2:278073/1‑101 (MQ=255)
                                                                                   gggggCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCGGGTTTCGCGGCCGATGCGGCTCCCGAAGTGATCAAGGCTGGTGCGCGCAAATCCATCGAg                   >  1:5010197/1‑101 (MQ=255)
                                                                                      ggCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCGGGTTTCGCGGCCGATGCGGCTCCCGAAGTGATCAAGGCTGGTGCGCGCAAATCCATCGAGCCa                <  1:3392612/101‑1 (MQ=255)
                                                                                      ggCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCGGGTTTCGCGGCCGATGCGGCTCCCGAAGTGATCAAGGCTGGTGCGCGCAAATCCATCGAGCCa                <  1:464946/101‑1 (MQ=255)
                                                                                        cGTGTATCGAAACCGTGATGCGTCCCCTATCCATCGGGTTTCGCGGCCTATGCGGCTCCCGAAGTGATCAAGGCTGGTGCGCGCAAATCCATCGAGCCAAt              <  2:1890010/101‑1 (MQ=255)
                                                                                        cGTGGATCGAAACCGTGATGCGTGCCCGATCCATCGGGTTTCGCGGCCGATGCGGCTCCCGAAGTGATCAAGGCTGGGCCGCGCAAATCCATCGAGCCAAt              >  1:651900/1‑101 (MQ=255)
                                                                                         gTGGATCGAAACCGTGATGCGTGCCCGATCCATCGGGTTTCGCGGCCGATGCGGCTCCCGAAGTGATCAAGGCTGGTGCGCGCAAATCCATCGAGCCAATc             >  1:1369821/1‑101 (MQ=255)
                                                                                          tGGATCGAAACCGTGATGCGTGCCCGATCCATCGGGTTTCGCGGCCGATGCGGCTCCCGAAGTGATCAAGGCTGGTGCGCGCAAATCCATCGAGCCAATCg            >  1:3970373/1‑101 (MQ=255)
                                                                                          tGGATCGAAACCGTGATGCGTGCCCGATCCATCGGGTTTCGCGGCCGATGCGGCTCCCGAAGTGATCAAGGCTGGTGCGCGCAAATCCATCGAGCCAATCg            <  1:4831742/101‑1 (MQ=255)
                                                                                          tGGATCGAAACCGTGATGCGTGCCCGATCCATCGGGTTTCGCGGCCGATGCGGCTCCCGAAGTGATCAAGGCTGGTGCGCGCAAATCCATCGAGCCAATCg            >  2:3050787/1‑101 (MQ=255)
                                                                                          gggATCGAAACCGTGATGCGTGCCCGATCCATCGGGTTTCGCGGCCGATGCGGCTCCCGAAGTGATCAAGGCTGGTGCGCGCAAATCCATCGAGCCAATCg            <  1:2946905/100‑1 (MQ=255)
                                                                                           ggATCGAAACCGTGATGCGTGCCCGATCCATCGGGTTTCGCGGCCGATGCGGCTCCCGAAGTGATCAAGGCTGGTGCGCGCAAATCCATCGAGCCAATCgg           >  1:2038288/1‑101 (MQ=255)
                                                                                           ggATCGAAACCGTGATGCGTGCCCGATCCATCGGGTTTCGCGGCCGATGCGGCTCCCGAAGTGATCAAGGCTGGTGCGCGCAAATCCATCGAGCCAATCgg           >  2:4034201/1‑101 (MQ=255)
                                                                                           ggATCGAAACCGTGATGCGTGCCCGATCCATCGGGTTTCGCGGCCGATGCGGCTCCCGAAGTGATCAAGGCTGGTGCGCGCAAATCCATCGAGCCAATCgg           >  1:4929818/1‑101 (MQ=255)
                                                                                             aTCGAAACCGTGATGCGTGCCCGATCCATCGGGTTTCGCGGCCGATGCGGCTCCCGAAGTGATCAAGGCTGGTGCGCGCAAATCCATCGAGCCAATCGGgc         >  1:190023/1‑101 (MQ=255)
                                                                                               cGAAACCGTGATGCGTGCCCGATCCATCGGGTTTCGCGGCCGATGCGGCTCCCGAAGTGATCAAGGCTGGTGCGCGCAAATCCATCGAGCCAATCGGgcgc       >  1:3240124/1‑101 (MQ=255)
                                                                                               cGAAACCGTGATGCGTGCCCGATCCATCGGGTTTCGCGGCCGATGCGGCTCCCGAAGTGATCAAGGCTGGTGCGCGCAAATCCATCCAGCCAATCGGgcgc       >  2:4868828/1‑101 (MQ=255)
                                                                                                  aaCCGTGATGCGTGCCCGATCCATCGGGTTTCGCGGCCGATGCGGCTCCCGAAGTGATCAAGGCTGGTGCGCGCAAATCCATCGAGCCAATCGGGCGCCCa    >  2:4679708/1‑101 (MQ=255)
                                                                                                  aaCCGTGATGCGTGCCCGATCCATCGGGTTTCGCGGCCGATGCGGCTCCCGAAGTGATCAAGGCTGGTGCGCGCAAATCCATCGAGCCAATCGGGCGCCCa    <  2:219556/101‑1 (MQ=255)
                                                                                                    ccGTGATGCGTGCCCGATCCATCGGGTTTCGCGGCCGATGCGGCTCCCGAAGTGATCAAGGCTGGTGCGCGCAAATCCATCGAGCCAATCGGGCGCCCAAc  <  1:1192340/101‑1 (MQ=255)
                                                                                                    ccGTGATGCGTGCCCGATCCATCGGGTTTCGCGGCCGATGCGGCTCCCGAAGTGATCAAGGCTGGTGCGCGCAAATCCATCGAGCCAATCGGGCGCCCAAc  <  2:3479062/101‑1 (MQ=255)
                                                                                                    |                                                                                                    
CCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATGGAAAACCGCGGCTTCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCGGGTTTCGCGGCCGATGCGGCTCCCGAAGTGATCAAGGCTGGTGCGCGCAAATCCATCGAGCCAATCGGGCGCCCAAC  >  NC_014034/1434809‑1435009

Base quality scores:  ATCG  < 3 ≤  ATCG  < 18 ≤  ATCG  < 27 ≤  ATCG  < 33 ≤  ATCG  < 40 ≤  ATCG