New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 = 1396738173 (1.070)48 (0.300) 7/132 19.6 0.22 coding (620/1578 nt) RCAP_rcc01307 hypothetical protein
?NC_014034 1434349 = 159 (0.650)intergenic (‑128/‑830) RCAP_rcc01334/RCAP_rcc01335 hypothetical protein/Fis family GAF modulated sigma54 specific transcriptional regulator
Rejected: Position hash score below cutoff.

Only 100 of 276 total aligned reads displayed.

CGATCATCGCAAAACCCTTATTTCATTGGAACATGGGGTATATGCACCGCTTACCGTGGATCGAAACAGGCTGCTTTGGGCGGAACACCTGATCCTGCTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGTCTCCGCTCTGCTTCACGGCTGCGTCAACCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACG  >  NC_014034/1434249‑1434449
                                                                                                    |                                                                                                    
cGATCATCGCAAAACCCTTATTTCATTGGAACATGGGGTATATGCACCGCTTACCGTGGATCGAAACAGGCTGCTTTGGGCGGAACACCTGATCCTGCTgg                                                                                                      <  2:3556841/101‑1 (MQ=255)
 gATCATCGCAAAACCCTTATTTCATTGGAACATGGGGTATAGGCACCGCTTACCGTGGATCGAAACAGGCTGCTTTGGGCGGAACACCTGATCCTGCTggg                                                                                                     <  2:4447207/101‑1 (MQ=255)
     atcGCAAAACCCTTATTTCATTGGAACATGGGGTATATGCACCGCTTACCGTGGATCGAAACAGGCTGCTTTGGGCGGAACACCTGATCCTGCTGGGTCGc                                                                                                 >  2:103705/1‑101 (MQ=255)
      tcGCAAAACCCTTATTTCATTGGAACATGGGGTATATGCACCGCTTACCGTGGATCGAAACAGGCTGCTTTGGGCGGAACACCTGATCCTGCTGGGTCGCt                                                                                                >  1:467289/1‑101 (MQ=255)
         cAAAACCCTTATTTCATTGGAACATGGGGTATATGCACCGCTTACCGTGGATCGAAACAGGCTGCTTTGGGCGGAACACCTGATCCTGCTGGGTCGCTccc                                                                                             >  1:298283/1‑101 (MQ=255)
          aaaaCCCTTATTTCATTGGAACATGGGGTATATGCACCGCTTACCGTGGATCGAAACAGGCTGCTTTGGGCGGAACACCTGATCCTGCTGGGTCGCTcccc                                                                                            >  2:116867/1‑101 (MQ=255)
          aaaaCCCTTATTTCATTGGAACATGGGGTATATGCACCGCTTACCGTGGATCGAAACAGGCTGCTTTGGGCGGAACACCTGATCCTGCTGGGTCGCTcccc                                                                                            >  2:2684885/1‑101 (MQ=255)
           aaaCCCTTATTTCATTGGAACATGGGGTATATGCACCGCTTACCGTGGATCGAAACAGGCTGCTTTGGGCGGAACACCTGATCCTGCTGGGTCGCTccccc                                                                                           >  2:743726/1‑101 (MQ=255)
            aaCCCTTATTTCATTGGAACATGGGGTATATGCACCGCTTACCGTGGATCGAAACAGGCTGCTTTGGGCGGAACACCTGATCCTGCTGGGTCGCTcccccc                                                                                          >  1:447738/1‑101 (MQ=255)
             aCCCTTATTTCATTGGAACATGGGGTATATGCACCGCTTACCGTGGATCGAAACAGGCTGCTTTGGGCGGAACACCTGATCCTGCTGGGTCGCTCCCCCcg                                                                                         <  2:3974695/101‑1 (MQ=255)
              cccTTATTTCATTGGAACATGGGGTATATGCACCGCTTACCGTGGATCGAAACAGGCTGCTTTGGGCGGAACACCTGATCCTGCTGGGTCGCTCCCCCcgc                                                                                        <  1:2768788/101‑1 (MQ=255)
                  tATTTCATTGGAACATGGGGTATATGCACCGCTTACCGTGGATCGAAACAGGCTGCTTTGGGCGGAACCCCTGATCCTGCTGGGTCGCTCCCCCCGCgggg                                                                                    <  1:3939390/101‑1 (MQ=255)
                  tATTTCATTGGAACATGGGGTATATGCACCGCTTACCGTGGATCGAAACAGGCTGCTTTGGGCGGAACACCTGATCCTGCTGGGTCGCTCCCCCCGCgggg                                                                                    >  2:2570667/1‑101 (MQ=255)
                   aTTTCATTGGAACATGGGGTATATGCACCGCTTACCGTGGATCGAAACAGGCTGCTTTGGGCGGAACCCCTGATCCTGCTGGGTCGTTCCCCCCGCggggg                                                                                   >  1:4356959/1‑101 (MQ=255)
                     ttCATTGGAACATGGGGTATATGCACCGCTTACCGTGGATCGAAACAGGCTGCTTTGGGCGGAACACCTGATCCTGCTGGGTCGCTCCCCCCGCGGGGGCg                                                                                 >  1:3893395/1‑101 (MQ=255)
                     ttCATTGGAACATGGGGTATATGCACCGCTTACCGTGGATCGAAACAGGCTGCTTTGGGCGGAACACCTGATCCTGCTGGGTCGCTCCCCCCGCGGGGGCg                                                                                 >  2:3122116/1‑101 (MQ=255)
                      tCATTGGAACATGGGGTATATGCACCGCTTACCGTGGATCGAAACAGGCTGCTTTGGGCGGAACACCTGATCCTGCTGGGTCGCTCCCCCCGCGGGGGCGt                                                                                >  2:496956/1‑101 (MQ=255)
                       cATTGGAACATGGGGTATATGCACCGCTTACCGTGGATCGAAACAGGCTGCTTTGGGCGGAACACCTGATCCTGCTGGGTCGCTCCCCCCGCGGGGGCGTg                                                                               >  2:1474868/1‑101 (MQ=255)
                        aTTGGAACATGGGGTATATGCACCGCTTACCGTGGATCGAAACAGGCTGCTTTGGGCGGAACACCTGATCCTGCTGGGTCGCTCCCCCCGCGGGGGCGTgg                                                                              >  1:134583/1‑101 (MQ=255)
                         ttGGAACATGGGGTATATGCACCGCTTACCGTGGATCGAAACAGGCTGCTTTGGTCGGAACACCTGATCCTGCTGGGTCGCTCCCCCCGCGGGGGCGTGGa                                                                             >  2:4195299/1‑101 (MQ=255)
                         ttGGAACATGGGGTATATGCACCGCTTACCGTGGATCGAAACAGGCTGCTTTGGGCGGAACACCTGATCCTGCTGGGTCGCTCCCCCCGCGGGGGCGTGGa                                                                             >  2:2649709/1‑101 (MQ=255)
                         ttGGAACATGGGGTATATGCACCGCTTACCGTGGATCGAAACAGGCTGCTTTGGGCGGAACACCTGATCCTGCTGGGTCGCTCCCCCCGCGGGGGCGTGGa                                                                             <  1:2469818/101‑1 (MQ=255)
                          tGGAACATGGGGTATATGCACCGCTTACCGTGGATCGAAACAGGCTGCTTTGGGCGGAACACCTGATCCTGCTGGGTCGCTCCCCCCGCGGGGGCGTGGAt                                                                            >  1:2947636/1‑101 (MQ=255)
                           ggAACATGGGGTATATGCACCGCTTACCGTGGATCGAAACAGGCTGCTTTGGGCGGAACACCTGATCCTGCTGGGTCGCTCCCCCCGCGGGGGCGTGGATc                                                                           >  1:1615544/1‑101 (MQ=255)
                           ggAACATGGGGTATATGCACCGCTTACCGTGGATCGAAACAGGCTGCTTTGGGCGGAACACCTGATCCTGCTGGGTCGCTCCCCCCGCGGGGGCGTGGATc                                                                           <  1:583626/101‑1 (MQ=255)
                           ggAACATGGGGTATATGCACCGCTTACCGTGGATCGAAACAGGCTGCTTTGGGCGGAACACCTGATCCTGCTGGGTCGCTCCCCCCGCGGGGGCGTGGATc                                                                           >  2:2967267/1‑101 (MQ=255)
                           ggAACATGGGGTATATGCACCGCTTACCGTGGATCGAAACAGGCTGCTTTGGGCGGAACACCTGATCCTGCTGGGTCGCTCCCCCCGCGGGGGCGTGGATc                                                                           <  1:1893590/101‑1 (MQ=255)
                           ggAACATGGGGTATATGCACCGCTTACCGTGGATCGAAACAGGCTGCTTTGGGCGGAACACCTGATCCTGCTGGGTCGCTCCCCCCGCGGGGGCGTGGATc                                                                           >  2:2417264/1‑101 (MQ=255)
                            gAACATGGGGTATATGCACCGCTTACCGTGGATCGAAACAGGCTGCTTTGGGCGGAACACCTGATCCTGCTGGGTCGCTCCCCCCGCGGGGGCGTGGATCg                                                                          <  1:3117273/101‑1 (MQ=255)
                             aaCATGGGGTATATGCACCGCTTACCGTGGATCGAAACAGGCTGCTTTGGGCGGAACACCTGATCCTGCTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGa                                                                         >  2:1217834/1‑101 (MQ=255)
                              aCATGGGGTATATGCACCGCTTACCGTGGATCGAAACAGGCTGCTTTGGGCGGAACCCCTGATCCTGCTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGaa                                                                        <  2:3279556/101‑1 (MQ=255)
                              aCATGGGGTATATGCACCGCTTACCGTGGATCGAAACAGGCTGCTTTGGGCGGAACACCTGATCCTGCTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGaa                                                                        >  1:472818/1‑101 (MQ=255)
                              aCATGGGGTATATGCACCGCTTACCGTGGATCGAAACAGGCTGCTTTGGGCGGAACACCTGATCCTGCTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGaa                                                                        <  1:4576738/101‑1 (MQ=255)
                              aCATGGGGTATATGCACCGCTTACCGTGGATCGAAACAGGCTGCTTTGGGCGGAACACCTGATCCTGCTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGaa                                                                        <  2:2329932/101‑1 (MQ=255)
                               cATGGGGTATATGCACCGCTTACCGTGGATCGAAACAGGCTGCTTTGGGCGGAACACCTGATCCTGCTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGaaa                                                                       <  1:4165456/101‑1 (MQ=255)
                                aTGGGGTATATGCACCGCTTACCGTGGATCGAAACAGGCTGCTTTGGGCGGAACACCTGATCCTGCTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAc                                                                      >  1:3477711/1‑101 (MQ=255)
                                 tGGGGTATATGCACCGCTTACCGTGGATCGAAACAGGCTGCTTTGGGCGGAACACCTGATCCTGCTGGGTCGCTCCCCCCGCGGGGGCGTGGGTCGAAACg                                                                     >  1:202128/1‑101 (MQ=255)
                                 tGGGGTATATGCACCGCTTACCGTGGATCGAAACAGGCTGCTTTGGGCGGAACACCTGATCCTGCTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACg                                                                     >  2:1797359/1‑101 (MQ=255)
                                  ggggTATATGCACCGCTTACCGTGGATCGAAACAGGCTGCTTTGGGCGGAACACCTGATCCTGCTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACgc                                                                    >  2:3733011/1‑100 (MQ=255)
                                  ggggTATATGCACCGCTTACCGTGGATCGAAACAGGCTGCTTTGGGCGGAACACCTGATCCTGCTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGt                                                                    >  2:2074028/1‑101 (MQ=255)
                                   gggTATATGCACCGCTTACCGTGGATCGAAACAGGCTGCTTTGGGCGGAACACCTGATCCTGCTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGtc                                                                   >  1:4999403/1‑101 (MQ=255)
                                    ggTATATGCACCGCTTACCGTGGATCGAAACAGGCTGCTTTGGGCGGAACACCTGATCCTGCTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGtct                                                                  >  2:2910432/1‑101 (MQ=255)
                                     gTATATGCACCGCTTACCGTGGATCGAAACAGGCTGCTTTGGGCGGAACACCTGATCCTGCTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGtctc                                                                 >  1:3380808/1‑101 (MQ=255)
                                      tataTGCACCGCTTACCGTGGATCGAAACAGGCTGCTTTGGGCGGAACACCTGATCCTGCTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGTCTcc                                                                <  2:663133/101‑1 (MQ=255)
                                      tataTGCACCGCTTACCGTGGATCGAAACAGGCTGCTTTGGGCGGAACACCTGATCCTGCTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGTCTcc                                                                <  1:1522920/101‑1 (MQ=255)
                                       atatGCACCGCTTACCGTGGATCGAAACAGGCTGCTTTGGGCGGAACACCTGATCCTGCTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGTCTCCg                                                               <  1:3560834/101‑1 (MQ=255)
                                         atGCACCGCTTACCGTGGATCGAAACAGGCTGCTTTGGGCGGAACACCTGATCCTGCTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGTCTCCGct                                                             >  1:4088564/1‑101 (MQ=255)
                                         atGCACCGCTTACCGTGGATCGAAACAGGCTGCTTTGGGCGGAACACCTGATCCTGCTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGTCTCCGct                                                             >  1:4293293/1‑101 (MQ=255)
                                          tGCACCGCTTACCGTGGATCGAAACAGGCTGCTTTGGGCGGAACACCTGATCCTGCTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGTCTCCGctc                                                            <  1:4004817/101‑1 (MQ=255)
                                               cGCTTACCGTGGATCGAAACAGGCTGCTTTGGGCGGAACACCTGATCCTGCTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGTCTCCGCTCTGCtt                                                       <  2:4581215/101‑1 (MQ=255)
                                               cGCTTACCGTGGATCGAAACAGGCTGCTTTGGGCGGAACACCTGATCCTGCTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGTCTCCGCTCTGCtt                                                       <  1:4557909/101‑1 (MQ=255)
                                                gCTTACCGTGGATCGAAACAGGCTGCTTTGGGCGGAACACCTGATCCTGCTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGTCTCCGCTCTGCTTc                                                      <  1:1217951/101‑1 (MQ=255)
                                                gCTTACCGTGGATCGAAACAGGCTGCTTTGGGCGGAACACCTGATCCTGCTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGTCTCCGCTCTGCTTc                                                      <  1:1410849/101‑1 (MQ=255)
                                                 cTTACCGTGGATCGAAACAGGCTGCTTTGGGCGGAACACCTGATCCTGCTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGTCTCCGCTCTGCTTCa                                                     >  2:2991771/1‑101 (MQ=255)
                                                 cTTACCGTGGATCGAAACAGGCTGCTTTGGGCGGAACACCTGATCCTGCTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGTCTCCGCTCTGCTTCa                                                     >  1:2750631/1‑101 (MQ=255)
                                                  ttACCGTGGATCGAAACAGGCTGCTTTGGGCGGAACACCTGATCCTGCTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGTCTCCGCTCTGCTTCAc                                                    <  1:497021/101‑1 (MQ=255)
                                                     ccGTGGATCGAAACAGGCTGCTTTGGGCGGAACACCTGATCCTGCTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGTCTCCGCTCTGCTTCACGGc                                                 >  2:3080174/1‑101 (MQ=255)
                                                      cGTGGATCGAAACAGGCTGCTTTGGGCGGAACACCTGATCCTGCTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGTCTCCGCTCTGCTTCACGGCt                                                >  1:4208161/1‑101 (MQ=255)
                                                      cGTGGATCGAAACAGGCTGCTTTGGGCGGAACACCTGATCCTGCTGGGTCGCTCCCCCCGCGGGGGCGTGGACCGAAACGTCTCCGCTCTGCTTCACGGcg                                                >  2:2476069/1‑100 (MQ=255)
                                                        tGGATCGAAACAGGCTGCTTTGGGCGGAACACCTGATCCTGCTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGTCTCCGCTCTGCTTCACGGCTGc                                              <  1:1828273/101‑1 (MQ=255)
                                                         ggATCGAAACAGGCTGCTTTGGGCGGAACACCTGATCCTGCTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGTCTCCGCTCTGCTTCACGGCTGCg                                             <  2:1286465/101‑1 (MQ=255)
                                                          gATCGAAACAGGCTGCTTTGGGCGGAACACCTGATCCTGCTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGTCTCCGCTCTGCTTCACGGCTGCgc                                            >  1:1005532/1‑100 (MQ=255)
                                                          gATCGAAACAGGCTGCTTGGGGCGGAACACCTGATCCTGCTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGTCTCCGCCCTGCTTCACGGCTGCGt                                            >  2:3882070/1‑101 (MQ=255)
                                                             cGAAACAGGCTGCTTTGGGCGGAACACCTGATCCTGCTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGTCTCCGCTCTGCTTCACGGCTGCGTCaa                                         <  1:2417438/101‑1 (MQ=255)
                                                             cGAAACAGGCTGCTTTGGGCGGAACACCTGATCCTGCTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGTCTCCGCTCTGCTTCACGGCTGCGTCaa                                         <  1:1474998/101‑1 (MQ=255)
                                                             cGAAACAGGCTGCTTTGGGCGGAACACCTGATCCTGCTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGTCTCCGCTCTGCTTCACGGCTGCGTCaa                                         >  1:3720361/1‑101 (MQ=255)
                                                               aaaCAGGCTGCTTTGGGCGGAACACCTGATCCTGCTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGTCTCCGCTCTGCTTCACGGCTGCGTCAAcc                                       >  1:2725489/1‑101 (MQ=255)
                                                               aaaCAGGCTGCTTTGGGCGGAACACCTGATCCTGCTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGTCTCCGCTCTGCTTCACGGCTGCGTCAAcc                                       >  1:1688963/1‑101 (MQ=255)
                                                                    ggCTGCTTTGGGCGGAACACCTGATCCTGCTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGTCTCCGCTCTGCTTCACGGCTGCGTCAACCTTGTc                                  <  2:3307132/101‑1 (MQ=255)
                                                                     gctgctTTGGGCGGAACACCTGATCCTGCTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGTCTCCGCTCTGCTTCACGGCTGCGTCAACCTTGttc                                 >  2:3158522/1‑99 (MQ=255)
                                                                     gctgctTTGGGCGGAACACCTGATCCTGCTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGTCTCCGCTCTGCTTCACGGCTGCGTCAACCTTGTCg                                 <  2:362794/101‑1 (MQ=255)
                                                                     gctgctTTGGGCGGAACACCTGATCCTGCTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGTCTCCGCTCTGCTTCACGGCTGCGTCAACCTTGTCg                                 <  1:3211972/101‑1 (MQ=255)
                                                                      ctgctTTGGGCGGAACACCTGATCCTGCTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGTCTCCGCTCTGCTTCACGGCTGCGTCAACCTTGTCGc                                <  1:4422340/101‑1 (MQ=255)
                                                                        gctTTGGGCGGAACACCTGATCCTGCTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGTCTCCGCTCTGCTTCACGGCTGCGTCAACCTTGTCGCTc                              >  2:4240721/1‑101 (MQ=255)
                                                                        gctTTGGGCGGAACACCTGATCCTGCTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGTCTCCGCTCTGCTTCACGGCTGCGTCAACCTTGTCGCTc                              >  1:3506158/1‑101 (MQ=255)
                                                                        gctTTGGGCGGAACACCTGATCCTGCTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGTCTCCGCTCTGCTTCACGGCTGCGTCAACCTTGTCGCTc                              <  2:4088326/101‑1 (MQ=255)
                                                                         ctTTGGGCTGAACACCTGATCCTGCTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGTCTCCGCTCTGCTTCACGGCTGCGTCAACCTTGTCGCTcc                             <  1:1991823/101‑1 (MQ=255)
                                                                         ctTTGGGCGGAACACCTGATCCTGCTGGGTCACTCCCCCCGCGGGGGCGTGGATCGAAACGTCTCCGCTCTGCTTCACGGCTGCGTCAACCTTGTCGCTcc                             >  2:1613788/1‑101 (MQ=255)
                                                                          tttGGGCGGAACACCTGATCCTGCTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGTCTCCGCTCTGCTTCACGGCTGCGTCAACCTTGTCGCTccc                            <  2:456423/101‑1 (MQ=255)
                                                                          tttGGGCGGAACACCTGATCCTGCTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGTCTCCGCTCTGCTTCACGGCTGCGTCAACCTTGTCGCTccc                            <  1:2186449/101‑1 (MQ=255)
                                                                          tttGGGCGGAACACCTGATCCTGCTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGTCTCCGCTCTGCTTCACGGCTGCGTCAACCTTGTCGCTccc                            >  1:4759280/1‑101 (MQ=255)
                                                                            tGGGCGGAACACCTGATCCTGCTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGTCTCCGCTCTGCTTCACGGCTGCGTCAACCTTGTCGCTccccc                          >  1:1110174/1‑101 (MQ=255)
                                                                            tGGGCGGAACACCTGATCCTGCTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGTCTCCGCTCTGCTTCACGGCTGCGTCAACCTTGTCGCTccccc                          <  2:2725288/101‑1 (MQ=255)
                                                                             gggCGGAACACCTGATCCTGCTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGTCTCCGCTCTGCTTCACGGCTGCGTCAACCTTGTCGCTcccccc                         <  2:202094/101‑1 (MQ=255)
                                                                              ggCGGAACACCTGATCCTGCTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGTCTCCGCTCTGCTTCACGGCTGCGTCAACCTTGTCGCTCCCCCcg                        <  1:3772246/101‑1 (MQ=255)
                                                                                  gAACACCTGATCCTGCTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGTCTCCGCTCTGCTTCACGGCTGCGTCAACCTTGTCGCTCCCCCCGCggg                    <  2:3673680/101‑1 (MQ=255)
                                                                                   aaCACCTGATCCTGCTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGTCTCCGCTCTGCTTCACGGCTGCGTCAACCTTGTCGCTCCCCCCGCgggg                   <  2:4909976/101‑1 (MQ=255)
                                                                                    acacCTGATCCTGCTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGTCTCCGCTCTGCTTCACGGGTGCGTCAACCTTTTCGCTCCCCCCCCggggg                  >  1:4919064/1‑101 (MQ=255)
                                                                                     cacCTGATCCTGCTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGTCTCCGCTCTGCTTCACGGCTGCGTCAACCTTGTCGCTCCCCCCGCGGGGGc                 <  2:1848160/101‑1 (MQ=255)
                                                                                     cacCTGATCCTGCTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGTCTCCGCTCTGCTTCACGGCTGCGTCAACCTTGTCGCTCCCCCCGCGGGGGc                 <  1:2137651/101‑1 (MQ=255)
                                                                                      acCTGATCCTGCTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGTCTCCGCTCTGCTTCACGGCTGCGTCAACCTTGTCGCTCCCCCCGCGGGGGCg                >  2:3439959/1‑101 (MQ=255)
                                                                                       ccTGATCCTGCTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGTCTCCGCTCTGCTTCACGGCTGCGTCAACCTTGTCGCTCCCCCCGCGGGGGCGt               <  1:975443/101‑1 (MQ=255)
                                                                                          gATCCTGCTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAATCGTCTCCGCGCTGCTTCACGGCTGAGTCAACCTTTTCGCTCCCCCCGCGGCGTCGTGGa            <  2:134567/101‑1 (MQ=37)
                                                                                           aTCCTGCTGGGGCGCGCCCCCCGCGGGGGCGTGGATCGAAACGTCTCCGCTCTGCTTCACGGCTGCGTCAACCTTGTCGCTCCCCCCGCGGGGGCGTGGAt           <  2:5040380/101‑1 (MQ=255)
                                                                                            tCCTGCTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGTCTCCGCTCTGCTTCACGGCTGCGTCAACCTTGTCGCTCCCCCCGCGGGGGCGTGGATc          >  1:725588/1‑101 (MQ=255)
                                                                                                gctgGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGTCTCCGCTCTGCTTCACGGCTGCGTCAACCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGaaa      <  2:472753/101‑1 (MQ=255)
                                                                                                  tgGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGTCTCCGCTCTGCTTCACGGCTGCGTCAACCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAaca    <  1:3625375/101‑1 (MQ=255)
                                                                                                   gggTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGTCTCCGCTCTGCTTCACGGCTGCGTCAACCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAacac   >  1:2521952/1‑101 (MQ=255)
                                                                                                   gggTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGTCTCCGCTCTGCTTCACGGCTGCGTCAACCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAacac   <  1:3138857/101‑1 (MQ=255)
                                                                                                    ggTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGTCTCCGCTCTGCTTCACGGCTGCGTCAACCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACg  <  1:2599153/101‑1 (MQ=255)
                                                                                                    |                                                                                                    
CGATCATCGCAAAACCCTTATTTCATTGGAACATGGGGTATATGCACCGCTTACCGTGGATCGAAACAGGCTGCTTTGGGCGGAACACCTGATCCTGCTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGTCTCCGCTCTGCTTCACGGCTGCGTCAACCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACG  >  NC_014034/1434249‑1434449

Base quality scores:  ATCG  < 3 ≤  ATCG  < 20 ≤  ATCG  < 28 ≤  ATCG  < 34 ≤  ATCG  < 41 ≤  ATCG