New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_014034 | = 1397599 | 153 (0.950) | 44 (0.270) | 10/132 | 17.5 | 0.37 | coding (1481/1578 nt) | RCAP_rcc01307 | hypothetical protein |
? | NC_014034 | 1434746 = | 0 (0.000) | intergenic (‑525/‑433) | RCAP_rcc01334/RCAP_rcc01335 | hypothetical protein/Fis family GAF modulated sigma54 specific transcriptional regulator | |||||
Rejected: Position hash score below cutoff. |
GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCCCGCGGCGTTTGACCTGGTCGCGG..GCAGCTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACG > NC_014034/1434680‑1434778
|
gTCGCCCCCCCCGCGGGGGCGTGGATCGAAACCTATGAGGGCTGGCGGCCCGGTCGTGGATCCCGCCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAaca < 1:1015311/101‑2 (MQ=2)
|
GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCCCGCGGCGTTTGACCTGGTCGCGG..GCAGCTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACG > NC_014034/1434680‑1434778
Base quality scores: 
ATCG
< 3 ≤
ATCG
< 20 ≤
ATCG
< 25 ≤
ATCG
< 33 ≤
ATCG
< 41 ≤
ATCG
|