BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	1608051 =	0 (0.000)	85 (0.390)	29/176	12.8	0.46	intergenic (+321/‑26)	RCAP_rcc01484/murD	hypothetical protein/UDP‑N‑acetylmuramoylalanine‑‑D‑glutamate ligase
*	?	NC_014034	2808467 =	200 (0.820)	85 (0.390)	29/176	12.8	0.46	intergenic (+22/+132)	pyrD2/acsA2	dihydroorotate oxidase/acetate‑‑CoA ligase
Rejected: Position hash score below cutoff.

Only 100 of 233 total aligned reads displayed.


CCTGGATGCGCTTTTGGCGCGCGACGGCTTTGCTTCGGTCGCGGAAGCCGTGGGCACCGGTCGCAGCCGCTGGCCCTGACCCGCCCGTAGCTGCGGGGGTTTCACACCCCCGCACCCCCGTGGCGTATTTGCGCCAAGAAAAAGCACAGACTTTTGCCCGTTCACCCTGGCGCAAATCTCCCGGGGGGAGA.GTGGCGCAG  >  NC_014034/2808367‑2808566


ccTGGATGCGCTTTTGGCGCGCGACGGCTTTGCTTCGGTCGCGGAAGCCGTGGGCACCGGTCGCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGtt                                                                                                      <  2:4105921/101‑1 (MQ=255)


 cTGGATGCGCTTTTGGCGCGCGACGGCTTTGCTTCGGTCGCGGAAGCCGTGGGCACCGGTCGCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGttt                                                                                                     <  1:2973308/101‑1 (MQ=255)


  tGGATGCGCTTTTGGCGCGCGACGGCTTTGCTTCGGTCGCGGAAGCCGTGGGCACCGGTCGCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGTTTc                                                                                                    <  1:1127268/101‑1 (MQ=255)


  tGGATGCGATTTTGGCGCGCGACGGCTTTGCTTCGGTCGCGGAAGCCGTGGGCACCGGTCGCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGTTTc                                                                                                    <  1:4359115/101‑1 (MQ=255)


   ggATGCGCTTTTGGCGCGCGACGGTTTTGCTTCGGTCGCGGAAGCCGTGGGCACCGGTCGCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGTTTca                                                                                                   <  2:4945732/101‑1 (MQ=255)


   ggATGCGCTTTTGGCGCGCGACGGCTTTGCTTCGGTCGCGGAAGCCGTGGGCACCGGTCGCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGgttta                                                                                                   >  2:4479709/1‑99 (MQ=255)


   ggATGCGCTTTTGGCGCGCGACGGCTTTGCTTCGGTCGCGGAAGCCGTGGGCACCGGTCGCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGGTTca                                                                                                   >  2:2663440/1‑101 (MQ=255)


     aTGCGCTTTTGGCGCGCGACGGCTTTGCTTCGGTCGCGGAAGCCGTGGGCACCGGTCGCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGGTTcaca                                                                                                 >  2:4909467/1‑101 (MQ=255)


     aTGCGCTTTGGGGGCGCGACGGCTTTGCTTCGGTCGCGGAAGCCGTGGGCACCGGTCGCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGTTTcaca                                                                                                 <  2:2519992/101‑1 (MQ=255)


      tGCGCTTTTGGCGCGCGACGGCTTTGCTTCGGTCGCGGAAGCCGTGGGCACCGGTCGCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGTTTCacac                                                                                                <  1:5027009/101‑1 (MQ=255)


         gcTTTGGGCGCGCGACGGCTTTGCTTCGGTCGCGGAAGCCGTGGGCACCGGTCGCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGTTTCAcacccc                                                                                             <  1:1760812/101‑1 (MQ=255)


          cTTTTGGCGCGCGACGGCTTTGCTTCGGTCGCGGAAGCCGTGGGCACCGGTCGCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGTTTCAcaccccc                                                                                            <  1:3088151/101‑1 (MQ=255)


           ttttGGCGCGCGACGGCTTTGCTTCGGTCGCGGAAGCCGTGGGCACCGGTCGCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGTTTCAcacccccg                                                                                           <  2:1630689/101‑1 (MQ=255)


           ttttGGCGCGCGACGGCTTTGCTTCGGTCGCGGAAGCCGTGGGCACCGGTCGCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGTTTCAcacccccg                                                                                           <  1:2518617/101‑1 (MQ=255)


            tttGGCGCGCGACGGCTTTGCTTCGGTCGCGGAAGCCGTGGGCACCGGTCGCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGGTTCAcacccccgc                                                                                          >  2:4253696/1‑101 (MQ=255)


            ttgggCGCGCTACGGCTTTGCTTCGGTCGCGGAAGCCGTGGGCACCGGTCGCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGTTTCAcacccccgc                                                                                          <  2:3375021/98‑1 (MQ=255)


              tGGCGCGCGACGGCTTTGCTTCGGTCGCGGAAGCCGTGGGCACCGGTCGCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGTTTTCcaccaccgcac                                                                                        >  2:1019384/1‑101 (MQ=255)


              tGGCGCGCGACGGCTTTGCTTCGGTCGCGGAAGCCGTGGGCACCGGTCGCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGTTTCAcacccccgcac                                                                                        <  2:4645923/101‑1 (MQ=255)


              tGGCGCGCGACGGCTTTGCTTCGGTCGCGGAAGCCGTGGGCACCGGTCGCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGTTTCAcacccccgcac                                                                                        <  1:1927188/101‑1 (MQ=255)


              tGGCGCGCGACGGCTTTGCTTCGGTCGCGGAAGCCGTGGGCACCGGTCGCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGTTTCAcacccccgcac                                                                                        <  1:102238/101‑1 (MQ=255)


                gcgcgtGACGGTTTTGCTTCGGTCCCGGAAGCCGTGGGCACCGGTCTCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGTTTCAcacccccgcaccc                                                                                      <  2:863455/101‑1 (MQ=37)


                gcccgcgACGGCTTTCCTTCGGTCGCGGAAGCCGTGGCCACCGGTCGCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGTTTCAcacccccgcaccc                                                                                      <  2:431112/98‑1 (MQ=37)


                 cgcgcgACGGCTTTGCTTCGGTCGCGGAAGCCGTGGGCACCGGTCGCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGTTTCAcacccccgcacccc                                                                                     <  1:2662321/101‑1 (MQ=255)


                  gcgcgACGTGTTGGCTTCGGTCGCGGAAGCCGTGGGCACCGGTCGCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGTTTCAcacccccgcaccccc                                                                                    <  2:3991739/101‑1 (MQ=37)


                  gcgcgACGGCTTTGCTTCGGTCGCGGAAGCCGTGGGCACCGGTCGCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGTTTCAcacccccgcaccccc                                                                                    >  2:786491/1‑101 (MQ=255)


                   cgcgACGGCTTTGCTTCGGTCGCGGAAGCCGTGGGCACCGGTCGCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGTTTCAcacccccgcacccccg                                                                                   >  2:2915241/1‑101 (MQ=255)


                    gcgACGGCTTTGCTTCGGTCGCGGAAGCCGTGGGCACCGGTCGCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGTTTCACACCCCCGCACCCCCGt                                                                                  <  1:3375432/101‑1 (MQ=255)


                     cgtcGGCTTTCCTTCGGTCGCGGAAGCCGTGGGCGCCGGTCGCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGTTTCACACCCCCGCACCCCCGTg                                                                                 <  2:3902834/98‑1 (MQ=37)


                       aCGGCTTTGCTTCGGTCGCGGAAGCCGTGGGCACCGGTCGCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGTTTCACACCCCCGCACCCCCGTGGc                                                                               <  1:4638561/101‑1 (MQ=255)


                        cGGCTTTGCTTCGGCCGGGGAAGCCGTGGGCACCGGTCGCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGTTTCACACCCCCGCACCCCCGTGGCg                                                                              <  1:3669938/101‑1 (MQ=255)


                        cGGCTTTGCTGCGGTCGCGGAAGCCGTGGGCACCGGTCGCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGTTTCACACCCCCGCACCCCCGTGGCg                                                                              <  2:3648542/101‑1 (MQ=255)


                          gttttGCTTCGGTCGCGGAAGCCGTGGGCACCGGTCGCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGTTTCACACCCCCGCACCCCCGTGGCGTa                                                                            <  2:1117724/99‑1 (MQ=255)


                            tttGCTTGGGCCGCGGAAGCCGTGGGCACCGGTCGCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGTTTCACACCCCCGCACCCCCGTGGCGTAtt                                                                          <  2:1226200/101‑1 (MQ=255)


                            tttGCTTCGGTCGCGGAAGCCGTGGGCACCGGTCGCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGTTTCACACCCCCGCACCCCCGTGGCGTAtt                                                                          <  2:2379816/101‑1 (MQ=255)


                            tttGCTTCGGTCGCGGAAGCCGTGGGCACCGGTCGCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGTTTCACACCCCCGCACCCCCGTGGCGTAtt                                                                          >  1:325569/1‑101 (MQ=255)


                            tttGCTTCGGTCGCGGAAGCCGTGGGCACCGGTCGCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGGTTCACACCCCCGCACCCCCGTGGCGTAtt                                                                          >  2:318359/1‑101 (MQ=255)


                             ttGCTTCGGTCGCGGAAGCCGTGGGCACCGGTCGCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGTTTCACACCCCCGCACCCCCGTGGCGTAttt                                                                         >  2:622215/1‑101 (MQ=255)


                             ttGCTTCGGTCGCGAAAGCCGTGGGCACCGGTCGCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGTTTCACACCCCCGCACCCCCGTGGCGTAttt                                                                         <  1:4870298/101‑1 (MQ=255)


                               gcgtCGGTCGCGGAAGCCGTGGGCACCGGTCGCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGTTTCACACCCCCGCACCCCCGTGGCGTATTTgc                                                                       >  1:2882130/4‑101 (MQ=255)


                               gCTTCGGTCGCGGAAGCCGTGGGCACCGGTCGCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGTTTCACACCCCCGCCCCCCCGTGGCGTATTTgc                                                                       >  1:3683909/1‑101 (MQ=255)


                               gCTTCGGTCGCGGAAGCCGTGGGCACCGGTCGCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGTTTCACACCCCCGCACCCCCGTGGCGTATTTgc                                                                       >  1:1339129/1‑101 (MQ=255)


                               gCTTCGGTCGCGGAAGCCGTGGGCACCGGTCGCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGGTTCACACCCCCGCCCCCCCGTGGCGTATTTgc                                                                       >  1:2506394/1‑101 (MQ=255)


                                   cGGTCGCGGAAGCCGTGGGCACCGGTCGCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGTTTCACACCCCCGCACCCCCGTGGCGTATTTGCGCCa                                                                   <  1:988909/101‑1 (MQ=255)


                                     gTCGCGGAAGCCGTGGGCACCGGTCGCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGTTTCACACCCCCGCACCCCCGTGGCGTATTTGCGCCAAg                                                                 >  2:392043/1‑101 (MQ=255)


                                     gTCGCGGAAGCCGTGGGCACCGGTCGCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGTTTCACACCCCCGCACCCCCGTGGCGTATTTGCGCCAAg                                                                 >  2:570606/1‑101 (MQ=255)


                                      tCGCGGAAGCCGGGGGCACCGGTCGCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGTTTCACACCCCCGCACCCCCGTGGCGTATTTGCGCCAAGa                                                                <  2:2484769/101‑1 (MQ=255)


                                      gcgcgAAAGCCGTGGGCACCGGTCGCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGTTTCACACCCCCGCACCCCCGTGGCGTATTTGCGCCAAGa                                                                <  2:2219668/100‑1 (MQ=255)


                                       cgcgGAAGCCGTGGGCACCGGTCGCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGTTTCACACCCCCGCACCCCCGTGGCGTATTTGCGCCAAGaa                                                               >  1:1316069/1‑101 (MQ=255)


                                       cgcgGAAGCCGTGGGCACCGGTCGCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGTTTCACACCCCCGCACCCCCGTGGCGTATTTGCGCCAAGaa                                                               <  1:1093991/101‑1 (MQ=255)


                                        gcgGAAGCCGTGGGCACCGGTCGCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGTTTCACACCCCCGCACCCCCGTGGCGTATTTGCGCCAAGaaa                                                              <  1:1656102/101‑1 (MQ=255)


                                         gggAAGCCGTGGGCACCGGTCGCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGTTTCACACCCCCGCACCCCCGTGGCGTATTTGCGCCAAGaaaa                                                             <  2:3421989/100‑1 (MQ=255)


                                          ggAAGCCGTGGGCACCGGTCGCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGTTTCACACCCCCGCACCCCCGTGGCGTATTTGCGCCAAGaaaaa                                                            >  2:853428/1‑101 (MQ=255)


                                              gCCGTGGGCACCGGTCGCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGTTTCACACCCCCGCACCCCCGTGGCGTATTTGCGCCAAGAAAAAGcac                                                        <  2:315307/101‑1 (MQ=255)


                                                  tGGGCACCGGTCGCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGTTTCACACCCCCGCACCCCCGTGGCGTATTTGCGCCAAGAAAAAGCACAGAc                                                    <  2:1300586/101‑1 (MQ=255)


                                                  tGGGCACCGGTCGCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGGTTCACACCCCCGCACCCCCGTGGCGTATTTGCGCCAAGAAAAAGCACAGAc                                                    >  1:1231119/1‑101 (MQ=255)


                                                   gggCACCGGTCGCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGTTTCACACCCCCGCACCCCCGTGGCGTATTTGCGCCAAGAAAAAGCACAGACt                                                   >  1:4743642/1‑101 (MQ=255)


                                                     gccccGGTCGCAGCCGCNGGCTCTGACCCGCCCGTAGCTGCGGGGGTTTCACACCCCCGCACCCCCGTGGCGTATTTGCGCCAAGAAAAAGCACAGACttt                                                 <  2:1781576/98‑1 (MQ=255)


                                                     gCACCGGTCGCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGTTTCACACCCCCGCACCCCCGTGGCGTATTTGCGCCAAGAAAAAGCACAGACttt                                                 >  1:830249/1‑101 (MQ=255)


                                                     gCACCGGTCGCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGTTTCACACCCCCGCACCCCCGTGGCGTATTTGCGCCAAGAAAAAGCACAGACttt                                                 >  2:4631043/1‑101 (MQ=255)


                                                      cACCGGTCGCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGTTTCACACCCCCGCACCCCCGTGGCGTATTTGCGCCAAGAAAAAGCACAGACtttt                                                >  2:2231328/1‑101 (MQ=255)


                                                      cACCGGTCGCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGTTTCACACCCCCGCACCCCCGTGGCGTATTTGCGCCAAGAAAAAGCACAGACtttt                                                <  2:1749897/101‑1 (MQ=255)


                                                      cACCGGTCGCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGTTTCACACCCCCGCACCCCCGTGGCGTATTTGCGCCAAGAAAAAGCACAGACtttt                                                <  1:5007995/101‑1 (MQ=255)


                                                      cACCGGTCGCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGTTTCACACCCCCGCACCCCCGTGGCGTATTTGCGCCAAGAAAAAGCACAGACtttt                                                <  1:845571/101‑1 (MQ=255)


                                                       cccGGTCGCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGTTTCACACCCCCGCACCCCCGTGGCGTATTTGCGCCAAGAAAAAGCACAGACTTTTg                                               <  2:1722880/100‑1 (MQ=255)


                                                       cccGGTCCCAGCCCCTGGCTCTGTCCCGCCCGTAGCTGCGGGGGTTTCACACCCCCGCACCCCCGTGGCGTATTTGCGCCAAGAAAAAGCACAGACTTTTg                                               <  2:4611430/100‑1 (MQ=17)


                                                       aCCGGTCGCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGTTTCACACCCCCGCACCCCCGTGGCGTATTTGCGCCAAGAAAAAGCACAGACTTTTg                                               <  2:3064489/101‑1 (MQ=255)


                                                         cGGTCGCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGTTTCACACCCCCGCACCCCCGTGGCGTATTTGCGCCAAGAAAAAGCACAGACTTTTGcc                                             <  1:4434101/101‑1 (MQ=255)


                                                              gCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGTTTCACACCCCCGCACCCCCGTGGCGTATTTGCGCCAAGAAAAAGCACAGACTTTTGCCCGTTc                                        <  1:3527709/101‑1 (MQ=255)


                                                               cAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGTTTCACACCCCCGCACCCCCGTGGCGTATTTGCGCCAAGAAAAAGCACAGACTTTTGCCCGTTCa                                       <  1:203991/101‑1 (MQ=255)


                                                                 gCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGTTTCACACCCCCGCACCCCCGTGGCGTATTTGCGCCAAGAAAAAGCACAGACTTTTGCCCGTTCAcc                                     <  1:2840594/101‑1 (MQ=255)


                                                                 gCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGTTTCACACCCCCGCACCCCCGTGGCGTATTTGCGCCAAGAAAAAGCACAGACTTTTGCCCGTTCAcc                                     <  1:4565040/101‑1 (MQ=255)


                                                                 gCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGTTTCACACCCCCGCACCCCCGTGGCGTATTTGCGCCAAGAAAAAGCACAGACTTTTGCCCGTTCAcc                                     >  2:2400296/1‑101 (MQ=255)


                                                                  ccGCTGGCTCTGACCCGCCCGTAGCTGCGGGTGTTTCACGCCCCCGCACCCCCGTGGCGTATTTGCGCCAAGAAAAAGCACAGACTTTTGCCCGTTCAccc                                    <  2:607501/101‑1 (MQ=255)


                                                                   cGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGTTTCACACCCCCGCACCCCCGTGGCGTATTTGCGCCAAGAAAAAGCACAGACTTTTGCCCGTTCACCCt                                   <  1:2376546/101‑1 (MQ=255)


                                                                     cTGGCTCTGACCCGCCCGTAGCTGCGGGGGTTTCACACCCCCGCACCCCCGTGGCGTATTTGCGCCAAGAAAAAGCACAGACTTTTGCCCGTTCACCCTgg                                 <  1:61898/101‑1 (MQ=255)


                                                                      tGGCTCTGACCCGCCCGTAGCTGCGGGGGTTTCACACCCCCGCACCCCCGTGGCGTATTTGCGCCAAGAAAAAGCACAGACTTTTGCCCGTTCACCCTGgc                                >  1:713914/1‑101 (MQ=255)


                                                                       ggCTCTGACCCGCCCGTAGCTGCGGGGGTTTCACACCCCCGCACCCCCGTGGCGTATTTGCGCCAAGAAAAAGCACAGACTTTTGCCCGTTCACCCTGgcg                               >  1:4987671/1‑101 (MQ=255)


                                                                         ctcTGACCCGCCCGTAGCTGCGGGGGTTTCACACCCCCGCACCCCCGTGGCGTATTTGCGCCAAGAAAAAGCACAGACTTTTGCCCGTTCACCCTGGCGCa                             <  1:3852585/99‑1 (MQ=255)


                                                                         ctcTGACCCGCCCGTAGCTGCGGGGGTTTCACACCCCCGCACCCCCGTGGCGTATTTGCGCCAAGAAAAAGCACAGACTTTTGCCCGTTCACCCTGGCGCa                             >  1:2576864/3‑101 (MQ=255)


                                                                         ctcTGACCCGCCCGTAGCTGCGGGGGTTTCACAACCCCGCACCCCCGCGGCGTATTTGCGCCAAGAAAACGAACAGACTTTTGCCCGCTCACCCTGGCGCa                             >  2:4210989/3‑101 (MQ=14)


                                                                          tcTGACCCGCCCGTAGCTGCGGGGGTTTCCCAACCCCGCACCCCCGTGGCGGATTTGCGCCAAGAAAAAGCACAGACTTTTGCCCGTTCACCCCGgccgaa                            >  2:362999/2‑97 (MQ=14)


                                                                            tGACCCGCCCGTAGCTGCGGGGGTTTCACACCCCCGCACCCCCGTGGCGTATTTGCGCCAAGAAAAAGCACAGACTTTTGCCCGTTCACCCTGGCGCAAAt                          <  1:3164687/101‑1 (MQ=40)


                                                                             gACCCGCCCGTAGCTGCGGGGGTTTCACACCCCCGCACCCCCGTGGCGTATTTGCGCCAAGAAAAAGCACAGACTTTTGCCCGTTCACCCTGGCGCAAAtc                         <  2:4336056/101‑1 (MQ=40)


                                                                                   cccgTAGCTGCGGGGGTTTCACACCCCCGCACCCCCGTGGCGTATTTGCGCCAAGAAAAAGCACAGACTTTTGCCCGTTCACCCTGGCGCAAATCTCCCgg                   >  1:2023545/1‑101 (MQ=39)


                                                                                     cgTCGCTACGGGGGTTTCACACCCCCGCACCCCCGTGGCGTATTTGCGCCAAGAAAAAGCACAGACTTTTGCCCGTTGACCCTGGCGCAAATGTCCCgggg                 >  2:2307833/1‑101 (MQ=14)


                                                                                     cgTAGCTGCGGGGGTTTCACACCCCCGCACCCCCGTGGCGTATTTGCGCCAAGAAAAAGCACAGACTTTTGCCCGTTCACCCTGGCGCAAATCTCCCgggg                 <  1:364650/101‑1 (MQ=39)


                                                                                     cgTAGCTGCGGGGGTTTCACACCCCCGCACCCCCGTGGCGTATTTGCGCCAAGAAAAAGCACAGACTTTTGCCCGTTCACCCTCGCGCAAATCTCCCgggg                 >  2:1464261/1‑101 (MQ=255)


                                                                                      gTAGCTGCGGGGGTTTCACACCCCCGCACCCCCGTGGCGTATTTGCGCCAAGCAAAAGCACAGACTTTTGCCCGTTCACCCTGGCGCAAATCTCCCggggg                >  2:4710841/1‑101 (MQ=255)


                                                                                      gTAGCTGCGGGGGTTTCACACCCCCGCACCCCCGTGGCGTATTTGCGCCAAGAAAAAGCACAGACTTTTGCCCGTTCACCCTGGCGCAAATCTCCCggggg                >  1:1676124/1‑101 (MQ=39)


                                                                                         gCTGCGGGGGTTTCACACCCCCGCACCCCCGTGGCGTATTTGCGCCAAGAAAAAGCACAGACTTTTGCCCGTTCACCCTGGCGCAAATCTCCCGGGGGgag             <  2:1365637/101‑1 (MQ=39)


                                                                                         gCTGCGGGGGTTTCACACCCCCGCACCCCCGTGGCGTATTTGCGCCAAGAAAAAGCACAGACTTTTGCCCGTTCACCCTGGCGCAAATCTCCCGGGGGgag             <  1:2171629/101‑1 (MQ=39)


                                                                                          cTGCGGGGGTTTCACACCCCCGCACCCCCGTGGCGTATTTGCGCCAAGAAAAAGCACAGACTTTTGCCCGTTCACCCTGGCGCAAATCTCCCGGGGGgaga            >  1:3914329/1‑101 (MQ=38)


                                                                                          cTGCGGGGGTTTCACACCCCCGCACCCCCGTGGCGTATTTGCGCCAAGAAAAAGCACAGACTTTTGCCCGTTCACCCTGGCGCAAATCTCCCGGGGGgaga            <  2:384884/101‑1 (MQ=38)


                                                                                           tGCGGGGGTTTCACACCCCCTCACCCCCGTGGCGTATTTGCGCCAAGAAAAAGCACAGACTTTTGCCCGTTCACCCTGGCGCAAATCTCCCGGGGGGaga.g          <  2:261812/101‑1 (MQ=37)


                                                                                           tGCGGGGGTTTCACACCCCCGCACCCCCGTGGCGTATTTGCGCCAAGAAAAAGCACAGACTTTTGCCCGTTCACCCTGGCGCAAATCTCCCGGGGGGaga.g          <  1:4188171/101‑1 (MQ=37)


                                                                                              gggggTTTCACACCCCCGCACCCCCGTGGCGTATTTGCGCCAAGAAAAAGCACAGACTTTTGCCCGTTCACCCTGGCGCAAATCTCCCGGGGGGaga.ggtg       <  1:392108/101‑4 (MQ=17)


                                                                                                  gTTTCACACCCCCGCACCCCCGTGGCGTATTTGCGCCAAGAAAAAGCACAGACTTTTGCCCGTTCACCCTGGCGCAAATCTCCCGGGGGGAGAGGTGgcgc    >  1:2405289/1‑101 (MQ=2)


                                                                                                   tttCACACCCCCGCACCCCCGTGGCGTATTTGCGCCAAGAAAAAGCACAGACTTTTGCCCGTTCACCCTGGCGCAAATCTCCCGGGGGGAGAGGTGGCGCa   >  2:1492588/1‑101 (MQ=9)


                                                                                                    ttCACACCCCCGCACCCCCGTGGCGTATTTGCGCCAAGAAAAAGCACAGACTTTTGCCCGTTCACCCTGGCGCAAATCTCCCGGGGGGAGAGGTGGCGCAg  >  1:4157719/1‑101 (MQ=9)


                                                                                                    ttCACACCCCCGCACCCCCGTGGCGTATTTGCGCCAAGAAAAAGCACAGACTTTTGCCCGTTCACCCTGGCGCAAATCTCCCGGGGGGAGAGGTGGCGCAg  >  1:1388976/1‑101 (MQ=9)


CCTGGATGCGCTTTTGGCGCGCGACGGCTTTGCTTCGGTCGCGGAAGCCGTGGGCACCGGTCGCAGCCGCTGGCCCTGACCCGCCCGTAGCTGCGGGGGTTTCACACCCCCGCACCCCCGTGGCGTATTTGCGCCAAGAAAAAGCACAGACTTTTGCCCGTTCACCCTGGCGCAAATCTCCCGGGGGGAGA.GTGGCGCAG  >  NC_014034/2808367‑2808566

Base quality scores:


ATCG

< 3 ≤


ATCG

< 18 ≤


ATCG

< 26 ≤


ATCG

< 33 ≤


ATCG

< 41 ≤


ATCG