BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	1640006 =	66 (0.300)	62 (0.280)	13/178	19.8	0.38	intergenic (+86/‑59)	mccB/mccA	methylcrotonoyl‑CoA carboxylase subunit beta/methylcrotonoyl‑CoA carboxylase subunit alpha
*	?	NC_014034	= 2494052	139 (0.570)	62 (0.280)	13/178	19.8	0.38	intergenic (+100/‑142)	RCAP_rcc02319/RCAP_rcc02320	hypothetical protein/hypothetical protein
Rejected: Position hash score below cutoff.

Only 100 of 170 total aligned reads displayed.


AGGGGGGGCGCTGCCCCCGTTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCC.GGGGGGTGAA.TGGC..G.AG.CAGA.AGGGGGGCAAGCG.CC.CCC.TGCCCCGGCGGTCCGTGGCGGCG.CCTTGACGGGCGGGGGCGCGGGCATTAACCGAAATTGCAACAG  >  NC_014034/2493952‑2494151


ggggggggCGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCC.gggggg                                                                                                               >  2:2513676/2‑101 (MQ=255)


   gggggCGCTGCCCCCCGTGCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATCAAACCGGATGCCTTTCATCTTGCCCGAAATATCCC.GGGGGGTGa                                                                                                            <  1:5026068/101‑1 (MQ=18)


   gggggCGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCC.GGGGGGTGa                                                                                                            <  2:560147/101‑1 (MQ=255)


     gggCGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCCGGCTATTTGCAGCAAGATGAAACCGGAAGCATTTCCTCTTTCCCGAAAAATCCC.ggggggggcat                                                                                                          >  1:1162576/1‑96 (MQ=17)


      ggCGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCC.GGGGGGTGAA.Tg                                                                                                        <  1:2366847/101‑1 (MQ=255)


       gcgcTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGCAATATCCC.GGGGGGTGAA.Tgg                                                                                                       <  1:2876840/101‑1 (MQ=255)


        cgcTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCC.GGGGGGTGAA.TGGc                                                                                                      <  1:4217268/101‑1 (MQ=255)


         gcTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCC.GGGGGGTGAA.TGGC..g                                                                                                   >  1:944133/1‑101 (MQ=255)


         ccTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCC.GGGGGGTGAA.TGGC..g                                                                                                   <  1:1388401/100‑1 (MQ=255)


           tGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCC.GGGGGGTGAA.TGGC..G.aa                                                                                                >  1:2942809/1‑100 (MQ=255)


            gCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCC.GGGGGGTGAA.TGGC..G.aag                                                                                               >  1:4935839/1‑99 (MQ=255)


            ccccccCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCC.GGGGGGTGAA.TGGC..G.aag                                                                                               <  2:295632/100‑3 (MQ=255)


             cccccG.TCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCC.GGGGGGTGAA.TGGC..G.aagcc                                                                                             <  1:1753572/101‑5 (MQ=255)


             cccccG.TCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCC.GGGGGGTGAA.TGGC..G.aagcc                                                                                             <  1:3490442/101‑5 (MQ=255)


             cccccG.TCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCC.GGGGGGTGAA.TGGC..G.aagcc                                                                                             <  1:2236576/101‑5 (MQ=255)


             cccccG.TCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCC.GGGGGGTGAA.TGGC..G.aagcc                                                                                             <  2:1958789/101‑5 (MQ=255)


              ccccG.TCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCC.GGGGGGTGAA.TGGC..G.aagcca                                                                                            >  2:1580692/1‑96 (MQ=255)


                cccgtCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAAAATCCC.GGGGGGTGAA.TGGC..G.aagccag                                                                                           >  1:2081755/5‑95 (MQ=21)


                   gtCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCC.GGGGGGTGAA.TGGC..G.aagccagagg                                                                                        >  2:4627169/2‑92 (MQ=255)


                    tCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCC.GGGGGGTGAA.TGGC..G.aagccagaggg                                                                                       <  1:1113887/101‑11 (MQ=255)


                         aaGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCC.GGGGGGTGAA.TGGC..GAAG.CCAG.AGGGGGGCa                                                                                 >  2:2286492/1‑101 (MQ=18)


                          aGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCC.GGGGGGTGAA.TGGC..GAAG.CCAG.AGGGGGGCag                                                                                <  2:2294015/101‑2 (MQ=18)


                           gCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCC.GGGGGGTGAA.TGGC..GAAG.CCAG.AGGGGGGCagc                                                                               <  2:2245006/101‑3 (MQ=18)


                            cGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCC.GGGGGGTGAA.TGGC..GAAG.CCAG.AGGGGGGCagcg                                                                              >  2:234936/1‑98 (MQ=18)


                             ggACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCC.GGGGGGTGAA.TGGC..GAAG.CCAG.AGGGGGGCagcgc                                                                             >  2:305709/1‑97 (MQ=17)


                             ggACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCC.GGGGGGTGAA.TGGC..GAAG.CCAG.AGGGGGGCagcgc                                                                             >  1:4959002/1‑97 (MQ=17)


                              gACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCC.GGGGGGTGAA.TGGC..GAAG.CCAG.AGGGGGGC.AGCG.cc                                                                          >  1:1954739/1‑101 (MQ=17)


                              gACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCC.GGGGGGTGAA.TGGC..GAAG.CCAG.AGGGGGGC.AGCG.cc                                                                          >  1:1658484/1‑101 (MQ=17)


                               aCTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCC.GGGGGGTGAA.TGGC..GAAG.CCAG.AGGGGGGC.AGCG.cc.c                                                                        >  2:380330/1‑101 (MQ=18)


                                 tCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCC.GGGGGGTGAA.TGGC..GAAG.CCAG.AGGGGGGC.AGCG.cc.ccc                                                                      >  2:3924517/1‑101 (MQ=17)


                                  ccccccGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCC.GGGGGGTGAA.TGGC..GAAG.CCAG.AGGGGGGC.AGCG.cc.cccc                                                                     <  2:4222518/101‑2 (MQ=17)


                                   cccccGGAATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCG.GGGGGGTGAA.TGGC..GAAG.CCAG.AGGGGGGC.AGCG.cc.cccct                                                                    <  2:4240711/101‑3 (MQ=17)


                                       cGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCCTCTTGCCCGAAATATCCC.GGGGGGTGAA.TGGC..GAAG.CCAG.AGGGGGGC.AGCGCCC.CCC.TGccc                                                                >  1:1996975/1‑101 (MQ=17)


                                       cGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCC.GGGGGGTGAA.TGGC..GAAG.CCAG.AGGGGGGC.AGCGCCC.CCC.TGccc                                                                <  2:1778835/101‑1 (MQ=17)


                                        gggATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCC.GGGGGGTGAA.TGGC..GAAG.CCAG.AGGGGGGC.AGCGCCC.CCC.TGcccc                                                               >  2:3722405/1‑101 (MQ=17)


                                         ggATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCC.GGGGGGTGAA.TGGC..GAAG.CCAG.AGGGGGGC.AGCGCCC.CCC.TGCCCcg                                                              <  1:4273383/101‑1 (MQ=17)


                                         ggATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCC.GGGGGGTGAA.TGGC..GAAG.CCAG.AGGGGGGC.AGCGCCC.CCC.TGCCCcg                                                              <  1:1580824/101‑1 (MQ=17)


                                         ggATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCC.GGGGGGTGAA.TGGC..GAAG.CCAG.AGGGGGGC.AGCGCCC.CCC.TGCCCcg                                                              >  1:4557965/1‑101 (MQ=17)


                                          gATATTTGCGGCAAGATGAAGGGGCATG.ATTTCATCTTGCCCGAAATATCCC..AGGGGTGAATTGGCCAA.AG.GCCA.AGAGGGGGCAGCG.CC.CCC.TGCCCcgc                                                             >  1:1106325/1‑100 (MQ=2)


                                           atatTTGCGGCAAGATGAAGGGGCATG.ATTTCATCTTGCCCGAAATATCCC..AGGGGTGAATTGGCCAA.AG.GCCA.AGAGGGGGCAGCG.CC.CCC.TGCCCcgcc                                                            >  1:831521/1‑99 (MQ=2)


                                           atatTTGCGGCAAGATGAAGGGGCATG.ATTTCATCTTGCCCGAAATATCCC..AGGGGTGAATTGGCCAA.AG.GCCA.AGAGGGGGCAGCG.CC.CCC.TGCCCcgcc                                                            <  2:2567939/101‑3 (MQ=2)


                                            tatTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCC.GGGGGGTGAA.TGGC..GAAG.CCAG.AGGGGGGC.AGCGCCC.CCC.TGCCCcggcg                                                           >  2:4221845/1‑101 (MQ=18)


                                            tatTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCC.GGGGGGTGAA.TGGC..GAAG.CCAG.AGGGGGGC.AGCGCCC.CCC.TGCCCcggcg                                                           >  1:2956470/1‑101 (MQ=17)


                                               ttGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCC.GGGGGGTGAA.TGGC..GAAG.CCAG.AGGGGGGC.AGCGCCC.CCC.TGCCCCGGCGGTc                                                        <  1:1445728/101‑1 (MQ=17)


                                                tGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCC.GGGGGGTGAA.TGGC..GAAG.CCAG.AGGGGGGC.AGCGCCC.CCC.TGCCCCGGCGGTcc                                                       >  2:1798383/1‑101 (MQ=17)


                                                tGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCC.GGGGGGTGAA.TGGC..GAAG.CCAG.AGGGGGGC.AGCGCCC.CCC.TGCCCCGGCGGGcc                                                       >  1:3779656/1‑101 (MQ=17)


                                                tGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCC.GGGGGGTGAA.TGGC..GAAG.CCAG.AGGGGGGC.AGCGCCC.CCC.TGCCCCGGCGGCcc                                                       >  1:3021628/1‑101 (MQ=17)


                                                tGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCC.GGGGGGTGAA.TGGC..GAAG.CCAG.AGGGGGG.GAGCG.CCGCCC.TGCCCCGGCGGTcc                                                       >  2:1902392/1‑101 (MQ=18)


                                                 gcagcaAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCC.GGGGGGTGAA.TGGC..GAAG.CCAG.AGGGGGGC.AGCGCCC.CCC.TGCCCCGGCGGTCCg                                                      <  1:67356/101‑1 (MQ=17)


                                                       aGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCC.GGGGGGTGAA.TGGC..GAAG.CCAG.AGGGGGGC.AGCGCCC.CCC.TGCCCCGGCGGTCCGTggcgg                                                >  2:3403828/1‑101 (MQ=18)


                                                       aGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCC.GGGGGGGGAA.TGGC..GAAG.CCAG.AGGGGGGC.AGCGCCC.CCC.TGCCCCCGCGGTCCGTggcgg                                                >  2:3144664/1‑101 (MQ=17)


                                                        gATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCC.GGGGGGTGAA.TGGC..GAAG.CCAG.AGGGGGGC.AGCGCCC.CCC.TGCCCCGGCGGTCCGTggcggc                                               >  1:991197/1‑101 (MQ=17)


                                                            aaaCCGGATGCCTTTCATCTTGCCCGAAATATCCC.GGGGGGTGAA.TGGC..GAAG.CCAG.AGGGGGGC.AGCGCCC.CCC.TGCCCCGGCGGTCCGTGGCGGCG.CCt                                          <  2:5000912/101‑1 (MQ=17)


                                                            aaaCCGGATGCCTTTCATCTTGCCCGAAATATCCC.GGGGGGTGAA.TGGC..GAAG.CCAG.AGGGGGGC.AGCGCCC.CCC.TGCCCCGGCGGTCCGTGGCGGCG.CCt                                          >  2:29184/1‑101 (MQ=17)


                                                             aaCCGGATGCCTTTCATCTTGCCCGAAATATCCC.GGGGGGTGAA.TGGC..GAAG.CCAG.AGGGGGGC.AGCGCCC.CCC.TGCCCCGGCGGTCCGTGGCGGCG.CCtt                                         <  2:2912032/101‑1 (MQ=17)


                                                              aCCGGATGCCTTTCATCTTGCCCGAAATATCCC.GGGGGGTGAA.TGGC..GAAG.CCAG.AGGGGGGC.AGCGCCC.CCC.TGCCCCGGCGGTCCGTGGCGGCG.CCTTg                                        <  2:3904594/101‑1 (MQ=17)


                                                                cGGATGCCTTTCATCTTGCCCGAAATATCCC.GGGGGGTGAA.TGGC..GAAG.CCAG.AGGGGGGC.AGCGCCC.CCC.TGCCCCGGCGGTCCGTGGCGGCG.CCTTGAc                                      >  1:4841375/1‑101 (MQ=17)


                                                                 ggATGCTTTTTATCTTGGCCGAAATATCCG.GGGGGGTGAA.TGGC..GAAG.CCAG.AGGGGGGC.AGCGCCC.CCC.TGCCCCGGCGGTCCGTGGCGGCG.CCTTGAcg                                     <  1:4727194/101‑1 (MQ=12)


                                                                 ggATGCCTTTCATCTTGCCCGAAATATCCC.GGGGGGTGAA.TGGC..GAAG.CCAG.AGGGGGGC.AGCGCCC.CCC.TGCCCCGGCGGTCCGTGGCGGCG.CCTTGAcg                                     <  2:3017367/101‑1 (MQ=17)


                                                                  gATGCCTTTCATCTTGCCCGAAATATCCC.GGGGGGTGAA.TGGC..GAAG.CCAG.AGGGGGGC.AGCGCCC.CCC.TGCCCCGGCGGTCCGTGGCGGCG.CCTTGAcgg                                    >  1:4469323/1‑101 (MQ=18)


                                                                    tGCCTTTCATCTTGCCCGAAATATCCC.GGGGGGTGAA.TGGC..GAAG.CCAG.AGGGGGGC.AGCGCCC.CCC.TGCCCCGGCGGTCCGTGGCGGCG.CCTTGAcgggc                                  <  1:740217/101‑1 (MQ=17)


                                                                    tGCCTTTCATCTTGCCCGAAATATCCC.GGGGGGTGAA.TGGC..GAAG.CCAG.AGGGGGGC.AGCGCCC.CCC.TGCCCCGGCGGTCCGT.GCGGCG.CCTTGAcgggcg                                 >  2:218413/1‑101 (MQ=17)


                                                                       cTTTCATCTTGCCCGAAATATCCC.GGGGGGTGAA.TGGC..GAAG.CCAG.AGGGGGGC.AGCGCCC.CCC.TGCCCCGGCGGTCCGTGGCGGCG.CCTTGAcgggcggg                               >  2:416665/1‑101 (MQ=18)


                                                                        tttCATCTTGCCCGAAATATCCC.GGGGGGTGAA.TGGC..GAAG.CCAG.AGGGGGGC.AGCGCCC.CCC.TGCCCCGGCGGTCCGTGGCGGCG.CCTTGACGGGCgggg                              >  2:1200603/1‑101 (MQ=18)


                                                                        tttCATCTTGCCCGAAATATCCC.GGGGGGTGAA.TGGC..GAAG.CCAG.AGGGGGGC.AGCGCCC.CCC.TGCCCCGGCGGTCCGTGGCGGCG.CCTTGACGGGCgggg                              <  2:4831782/101‑1 (MQ=17)


                                                                         ttCATCTTGCCCGAAATATCCC.GGGGGGTGAA.TGGC..GAAG.CCAG.AGGGGGGC.AGCGCCC.CCC.TGCCCCGGCGGTCCGTGGCGGCG.CCTTGACGGGCggggg                             >  2:3039833/1‑101 (MQ=18)


                                                                         ttCATCTTGCCCGAAATATCCC.GGGGGGTGAA.TGGC..GAAG.CCAG.AGGGGGGC.AGCGCCC.CCC.TGCCCCGGCGGTCCGTGGCGGCG.CCTTGACGGGCggggg                             >  2:76190/1‑101 (MQ=18)


                                                                         ttCATCTTGCCCGAAATATCCC.GGGGGGTGAA.TGGC..GAAG.CCAG.AGGGGGG.AAGCGCCC.CCC.TGCCCCGGCGGGCCGCGGCGGCG.CCTTGCGGGGCggggg                             >  2:1531078/1‑101 (MQ=9)


                                                                         ttCATCTTGCCCGAAATATCCC.GGGGGGTGAA.CGGC..GAAG.CCAG.AGGGGGGC.AGCGCCC.CCC.TGCCCCGGCGGTCCGTGGCGGCG.CCTTGACGGGCggggg                             >  2:1903303/1‑101 (MQ=18)


                                                                             tCTTGCCCGAAATATCCC.GGGGGGTGAA.TGGC..GAAG.CCAG.AGGGGGGC.AGCGCCC.CCC.TGCCCCGGCGGTCCGTGGCGGCG.CCTTGACGGGCGGGGGcgcg                         >  2:4429714/1‑101 (MQ=18)


                                                                             tCTTGCCCGAAATATCCC.GGGGGGTGAA.TGGC..GAAG.CCAG.AGGGGGGC.AGCGCCC.CCC.TGCCCCGGCGGTCCGTGGCGGCG.CCTTGACGGGCGGGGGcgcg                         >  2:364132/1‑101 (MQ=18)


                                                                              cTTGCCCGAAATATCCC.GGGGGGTGAA.TGGC..GAAG.CCAG.AGGGGGGC.AGCGCCC.CCC.TGCCCCGGCGGTCCGTGGCGGCG.CCTTGACGGGCGGGGGCGCgg                        <  2:4405102/101‑1 (MQ=18)


                                                                              cTTGCCCGAAATATCCC.GGGGGGTGAA.TGGC..GAAG.CCAG.AGGGGGGC.AGCGCCC.CCC.TGCCCCGGCGGTCCGTGGCGGCG.CCTTGACGGGCGGGGGCGCgg                        >  1:3041789/1‑101 (MQ=18)


                                                                              cTTGCCCGAAATATCCC.GGGGGGTGAA.TGGC..GAAG.CCAG.AGGGGGGC.AGCGCCC.CCC.TGCCCCGGCGGTCCGTGGCGGCG.CCTTGACGGGCGGGGGCGCgg                        >  1:3428738/1‑101 (MQ=18)


                                                                                tGCCCGAAATATCCCGGGGGGGGGAA.TGGG..G.AA.CCAA.GGGGGGGGAAGGG.CC.CCCTTGCCCCGCCGGCCCG.GGCGGGGCCCTTGACGGGGGGGGGGGGggg                       >  1:2060910/1‑101 (MQ=255)


                                                                                tGCCCGAAATATCCC.GGGGGGTGAA.TGGC..GAAG.CCAG.AGGGGGGC.AGCGCCC.CCC.TGCCCCGGCGGTCCGTGGCGGCG.CCTTGACGGGCGGGGGCGCGGGc                      <  1:380383/101‑1 (MQ=18)


                                                                                tGCCCGAAATATCCC.GGGGGGTGAA.TGGC..GAAG.CCAG.AGGGGGGC.AGCGCCC.CCC.TGCCCCGGCGGTCCGTGGCGGCG.CCTTGACGGGCGGGGGCGCGGGc                      <  1:3325569/101‑1 (MQ=18)


                                                                                 gCCCGAAATATCCC.GGGGGGTGAA.TGGC..G.AA.GCCA.GAGGGGGCCAGCGCCC.CCC.TCCCCCGGCGGTCCGTGGCGGCG.CCTTCACCTGGGGGGGCGCggggc                     >  2:621723/1‑99 (MQ=9)


                                                                                  gccGAAATATCCC.GGGGGGTGAA.TGGC..GAAG.CCAG.AGGGGGGC.AGCGCCC.CCC.TGCCCCGGCGGTCCGTGGCGGCG.CCTTGACGGGCGGGGGCGCGGGCAt                    >  2:2132524/2‑101 (MQ=18)


                                                                                  cccGAAATATCCC.GGGGGGTGAA.TGGC..GAAG.CCAG.AGGGGGGC.AGCGCCC.CCC.TGCCCCGGCGGTCCGTGGCGGCG.CCTTGACGGGCGGGGGCGCGGGCAt                    <  1:2606143/101‑1 (MQ=18)


                                                                                   ccGAAATATCCC.GGGGGGTGAA.TGGC..GAAG.CCAG.AGGGGGGC.AGCGCCC.CCC.TGCCCCGGCGGTCCGTGGCGGCG.CCTTGACGGGCGGGGGCGCGGGCAtt                   >  2:2835915/1‑101 (MQ=18)


                                                                                     gAAATATCCC.GGGGGGTGAA.TGGC..GAAG.CCAG.AGGGGGGC.AGCGCCC.CCC.TGCCCCGGCGGTCCGTGGCGGCG.CCTTGACGGGCGGGGGCGCGGGCATTaa                 <  1:2443983/101‑1 (MQ=18)


                                                                                      aaaTATCCC.GGGGGGTGAA.TGGC..GAAG.CCAG.AGGGGGGC.AGCGCCC.CCC.TGCCCCGGCGGTCCGTGGCGGCG.CCTTGGCGGGCGGGGGCGCGGGCATTAAc                <  2:1701948/101‑1 (MQ=18)


                                                                                      aaaTATCCC.GGGGGGTGAA.TGGC..GAAG.CCAG.AGGGGGGC.AGCGCCC.CCC.TGCCCCGGCGGTCCGTGGCGGCG.CCTTGACGGGCGGGGGCGCGGGCATTAAc                >  2:2218909/1‑101 (MQ=18)


                                                                                      aaaTATCCC.GGGGGGTGAA.TGGC..GAAG.CCAG.AGGGGGGC.AGCGCCC.CCC.TGCCCCGGCGGTCCGTGGCGGCG.CCTTGACGGGCGGGGGCGCGGGCATTAAc                >  1:3127500/1‑101 (MQ=18)


                                                                                      aaaTATCCC.GGGGGGTGAA.TGGC..GAAG.CCAG.AGGGGGGC.AGCGCCC.CCC.TGCCCCGGCGGTCCGTGGCGGCG.CCTTGACGGGCGGGGGCCCGGGGATTAAc                >  2:1249508/1‑101 (MQ=18)


                                                                                       aaTATCCC.GGGGGGTGAA.TGGC..GAAG.CCAG.AGGGGGG.AAGAGCCC.CCC.TGCCCCGGCGGACAGCGGCGGAG.ACTTGACGGGGGGGGGCCCGGGCGTCAAcc               >  1:4022190/1‑101 (MQ=2)


                                                                                        atatCCC.GGGGGGTGAA.TGGC..GAAG.CCAG.AGGGGGGC.AGCGCCC.CCC.TGCCCCGGCGGTCCGTGGCGGCG.CCTTGACGGGCGGGGGCGTGGGCATTAACCg              <  1:2733563/101‑1 (MQ=18)


                                                                                        atatCCC.GGGGGGTGAA.TGGC..GAAG.CCAG.AGGGGGGC.AGCGCCC.CCC.TGCCCCGGCGGTCCGTGGCGGCG.CCTTGACGGGCGGGGGCGCGGGCATTAACCg              <  2:1658355/101‑1 (MQ=21)


                                                                                        atatCCC.GGGGGGTGAA.TGGC..GAAG.CCAG.AGGGGGGC.AGCGCCC.CCC.TGCCCCGGCGGTCCGTGGCGGCG.CCTTGACGGGCGGGGGCGCGGGCATTAACCg              >  2:4307076/1‑101 (MQ=21)


                                                                                         tatCCC.GGGGGGTGAA.TGGC..GAAG.CCAG.AGGGGGGC.AGCGCCC.CCC.TGCCCCGGCGGTCCGTGGCGGCG.CCTTGACGGGCGGGGGCGCGGGCATTAACCGa             >  1:4144164/1‑101 (MQ=21)


                                                                                          atCCC.GGGGGGTGAA.TGGC..GAAG.CCAG.AGGGGGGC.AGCGCCC.CCC.TGCCCCGGCGGTCCGTGGCGGCG.CCTTGACGGGCGGGGGCGCGGGCATTAACCGaa            <  2:551369/101‑1 (MQ=21)


                                                                                          agccc.GGGGGGGGAA.TGGC..GAAG.CCAG.AGGGGGGC.AGCGCCC.CCC.TGCCCCGGCGGTCCGTGGCGGCG.CCTTGACGGGCGGGGGCGCGGGCATTAACCGaa            <  1:305762/99‑1 (MQ=21)


                                                                                           tCCC.GGGGGGTGAA.TGGC..GAAG.CCAG.AGGGGGGC.AGCGCCC.CCC.TGCCCCGGCGGTCCGTGGCGGCG.CCTTGACGGGCGGGGGCGCGGGCATTAACCGaaa           >  1:3623977/1‑101 (MQ=21)


                                                                                           tCCC.GGGGGGTGAA.TGGC..GAAG.CCAG.AGGGGGGC.AGCGCCC.CCC.TGCCCCGGCGGTCCGTGGCGGCG.CCTTGACGGGCGGGGGCGCGGGCATTAACCGaaa           <  2:333362/101‑1 (MQ=21)


                                                                                            ccc.GGGGGGTGAA.TGGC..GAAG.CCAG.AGGGGGGC.AGCGCCC.CCC.TGCCCCGGCGGTCCGTGGCGGCG.CCTTGACGGGCGGGGGCGCGGGCATTAACCGAAAt          <  2:3722167/101‑1 (MQ=21)


                                                                                            ccc.GGGGGGTGAA.TGGC..GAAG.CCAG.AGGGGGGC.AGCGCCC.CCC.TGCCCCGGCGGTCCGTGGCGGCG.CCTTGACGGGCGGGGGCGCGGGCATTAACCGAAAt          <  1:234970/101‑1 (MQ=21)


                                                                                                 gggggTGAA.TGGC..GAAGCCAG..AGGGGGGC.AGCGCCC.CCC.TGCCCCGGCGGTCCGTGGCGGCG.CCTTGACGGGCGGGGGCGCGGGCATTAACCGAAATTGCa      >  2:3177538/1‑101 (MQ=25)


                                                                                                   gggTGAA.TGGC..G.AG.CGCAGAGGGGGACGAGGC.CC.CCC.TGCCCCGGCGGTCCGTGGCGGCG.CCTTGACGGGCGGGGGCGCGGGCATTAACCGAAATTGCAAc    <  2:4913768/101‑1 (MQ=255)


                                                                                                     gTGAA.TGGC..GAAGCCAG..AGGGGGGC.AGCGCCC.CCC.TGCCCCGGCGGGCCGTGGGGGCG.CCTTGACGGGCGGGGGCGGGGGGCTTAACCGAAATTGCAACAg  >  1:2681094/1‑101 (MQ=16)


AGGGGGGGCGCTGCCCCCGTTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCC.GGGGGGTGAA.TGGC..G.AG.CAGA.AGGGGGGCAAGCG.CC.CCC.TGCCCCGGCGGTCCGTGGCGGCG.CCTTGACGGGCGGGGGCGCGGGCATTAACCGAAATTGCAACAG  >  NC_014034/2493952‑2494151

Base quality scores:


ATCG

< 3 ≤


ATCG

< 17 ≤


ATCG

< 24 ≤


ATCG

< 33 ≤


ATCG

< 40 ≤


ATCG