BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	1732710 =	59 (0.260)	33 (0.140)	9/186	22.8	0.28	intergenic (‑134/‑269)	RCAP_rcc01601/tgt	FeS assembly SUF system protein/queuine tRNA‑ribosyltransferase
*	?	NC_014034	3276380 =	114 (0.470)	33 (0.140)	9/186	22.8	0.28	intergenic (‑132/+117)	RCAP_rcc03082/RCAP_rcc03083	lipoprotein/membrane bound YbgT‑like protein
Rejected: Position hash score below cutoff.

Only 100 of 128 total aligned reads displayed.


AGCCTGCACGACGGGGGCAAGGGGCAATGCGGCGCAAGGCCCCCCGGGCAACCGGCCCCCGTTTCTTCTTGGCCC.AAATACGCC.GGGGGTCC.GGGGGC.GGAGCCCCC..GGCGGGTCGCCGCGCGGCCGCGC.GGC.GAAACAAAGGACCG.ACC.GGGCAGCCCCCCGGTCGGCCAGTGAACCCGAAACGC.GAAGGGACGCGGG  >  NC_014034/3276282‑3276480


agcCTGCACGACGGGGGCAAGGGGCAATGCGGCGCAAGGCCCCCCGGGCAACCGGCCCCCGTTTCTTCTTGGCCC.AAATACGCC.GGGGGTCC.GGGGGC.ggc                                                                                                           >  2:2999301/1‑100 (MQ=255)


agcCTGCACGACGGGGGCAAGGGGCAATGCGGCGCAAGGCCCCCCGGGCAACCGGCCCCCGTTTCTTCTTGGCCC.AAATACGCC.GGGGGTCC.GGGGGC.GGa                                                                                                           >  2:3515553/1‑101 (MQ=255)


agcCTGCACGACGGGGGCAAGGGGCAATGCGGCGCAAGGCCCCCCGGGCAACCGGCCCCCGTTTCTTCTTGGCCC.AAATACGCC.GGGGGTCC.GGGGGC.GGa                                                                                                           <  1:3980160/101‑1 (MQ=255)


   cTGCACGACGGGGGCAAGGGGCAATGCGGCGCAAGGCCCCCCGGGCAACCGGCCCCCGTTTCTTCTTGGCCC.AAATACGCC.GGGGGTCC.GGGGGC.GGAGcc                                                                                                        >  1:1304035/1‑101 (MQ=255)


   cTGCACGACGGGGGCAAGGGGCAATGCGGCGCAAGGCCCCCCGGGCAACCGGCCCCCGTTTCTTCTTGGCCC.AAATACGCC.GGGGGTCC.GGGGGC.GGAGcc                                                                                                        >  2:141806/1‑101 (MQ=255)


   cTGCACGACGGGGGCAAGGGGCAATGCGGCGCAAGGCCCCCCGGGCAACCGGCCCCCGTTTCTTCTTGGCCC.AAATACGCC.GGGGGTCC.GGGGGC.GGAGcc                                                                                                        <  1:2093162/101‑1 (MQ=255)


    tGCACGACGGGGGCAAGGGGCAATGCGGCGCAAGGCCCCCCGGGCAACCGGCCCCCGTTTCTTCTTGGCCC.AAATACGCC.GGGGGTCC.GGGGGC.GGAGccc                                                                                                       <  2:2627001/101‑1 (MQ=255)


      cACGGCGGGGGCAGGGGGCAATGCGGCGCAAGGCCCCCCGGGCAACCGGCCCCCGTTTCTTCTTGGCCC.AAATACGCC.GGGGGTCC.GGGGGC.GGAGccccc                                                                                                     <  2:4003609/101‑1 (MQ=255)


       acgacgGGGGCAAGGGGCAATGCGGCGCAAGGCCCCCCGGGCAACCGGCCCCCGTTTCTTCTTGGCCC.AAATACGCC.GGGGGTCC.GGGGGC.GGAGCCCCc..g                                                                                                  >  2:920942/1‑101 (MQ=255)


         gacgGGGGCAAGGGGCAATGCGGCGCAAGGCCCCCCGGGCAACCGGCCCCCGTTTCTTCTTGGCCC.AAATACGCC.GGGGGTCC.GGGGGC.GGAGCCCCc..ggc                                                                                                >  1:4419044/1‑101 (MQ=255)


           cgGGGGCAAGGGGCAATGCGGCGCAAGGCCCCCCGGGCAACCGGCCCCCGTTTCTTCTTGGCCC.AAATACGCC.GGGGGTCC.GGGGGC.GGAGCCCCc..ggcgg                                                                                              >  1:2790017/1‑101 (MQ=255)


            gggggCAAGGGGCAATGCGGCGCAAGGCCCCCCGGGCAACCGGCCCCCGTTTCTTCTTGGCCC.AAATACGCC.GGGGGTCC.GGGGGC.GGAGCCCCC..GGCggg                                                                                             >  1:2401887/1‑101 (MQ=255)


            gggggCAAGGGGCAATGCGGCGCAAGGCCCCCCGGGCAACCGGCCCCCGTTTCTTCTTGGCCC.AAATACGCC.GGGGGTCC.GGGGGC.GGAGCCCCC..GGCggg                                                                                             >  1:1202710/1‑101 (MQ=255)


            gggggCAAGGGGCAATGCGGCGCAAGGCCCCCCGGGCAACCGGCCCCCGTTTCTTCTTGGCCC.AAATACGCC.GGGGGTCC.GGGGGC.GGAGCCCCC..GGCggg                                                                                             >  1:3749382/1‑101 (MQ=255)


            gggggCAAGGGGCAATGCGGCGCAAGGCCCCCCGGGCAACCGGCCCCCGTTTCTTCTTGGCCC.AAATACGCC.GGGGGTCC.GGGGGC.GGAGCCCCC..GGCggg                                                                                             >  2:3650777/1‑101 (MQ=255)


            gggggCAAGGGGCAATGCGGCGCAAGGCCCCCCGGGCAACCGGCCCCCGTTTCTTCTTGGCCC.AAATACGCC.GGGGGTCC.GGGGGC.GGAGCCCCC..GGCggg                                                                                             >  2:912480/1‑101 (MQ=255)


              gggcaaggggcaaTGCGGCGCAAGGCCCCCCGGGCAACCGGCCCCCGTTTCTTCTTGGCCC.AAATACGCC.GGGGGTCC.GGGGGC.GGAGCCCCC..GGCggggg                                                                                           >  1:3891948/1‑99 (MQ=255)


               ggcaaggggcaaTGCGGCGCAAGGCCCCCCGGGCAACCGGCCCCCGTTTCTTCTTGGCCC.AAATACGCC.GGGGGTCC.GGGGGC.GGAGCCCCC..GGCGGGGcg                                                                                          >  1:5023402/1‑101 (MQ=255)


                gcacggggcaaTGCGGCGCAAGGCCCCCCGGGCAACCGGCCCCCGTTTCTTCTTGGCCC.AAATACGCC.GGGGGTCC.GGGGGC.GGAGCCCCC..GGCggggggg                                                                                         >  1:3735076/1‑97 (MQ=255)


                gcaaggggcaaTGCGGCGCAAGGCCCCCCGGGCAACCGGCCCCCGTTTCTTCTTGGCCC.AAATACGCC.GGGGGTCC.GGGGGC.GGAGCCCCC..GGCggggggg                                                                                         >  1:2533510/1‑97 (MQ=255)


                 caaggggcaaTGCGGCGCAAGGCCCCCCGGGCAACCGGCCCCCGTTTCTTCTTGGCCC.AAATACGCC.GGGGGTCC.GGGGGC.GGAGCCCCC..GGCgggggggc                                                                                        >  2:1783351/1‑96 (MQ=255)


                    ggggcaaTGCGGCGCAAGGCCCCCCGGGCAACCGGCCCCCGTTTCTTCTTGGCCC.AAATACGCC.GGGGGTCC.GGGGGC.GGAGCCCCC..GGCggggggcgccc                                                                                     >  1:1842478/1‑93 (MQ=255)


                     gggcaaGGGGGC.CAAGGCCCCCCCGGCCACCCGCCCCCCTTTTTTTTTGGCCCAAAATCCGCG.GGGGGCCG.GGGGGG.GGACCCCCC..GGCGGGTCgccgcgc                                                                                    <  2:4138601/101‑1 (MQ=255)


                      ggcaaTGCGGCGCAAGGCCCCCCGGGCAACCGGCCCCCGTTTCTTCTTGGCCC.AAATACGCC.GGGGGTCC.GGGGGC.GGAGCCCCC..GGCgggggggggccgg                                                                                   >  2:901222/1‑91 (MQ=255)


                       gaacggcggcgC.AGGCCCCCCGGGCCACCGGCCCCCTTTTTCTTTTTGCCC.AAA.ACCCG.GGGGGGGC.GGGGGG.GGGGCCCCCCGGGCGGGTCgccgcgcgg                                                                                  <  1:304618/96‑1 (MQ=255)


                         aaTGCGGCGCAAGGCCCCCCGGGCAACCGGCCCCCGTTTCTTCTTGGCCC.AAATACGCC.GGGGGTCC.GGGGGC.GGAGCCCCC..GGCGGGGGggcgcccggcc                                                                                >  1:4101993/1‑101 (MQ=21)


                           tGCGGCGCAAGGCCCCCCGGGCAACCGGCCCCCGTTTCTTCTTGGCCC.AAATACGCC.GGGGGTCC.GGGGGC.GGAGCCCCC..GGCGGGGGggcgcgcggcccc                                                                              >  1:4756449/1‑99 (MQ=255)


                             cggcgCAAGGCCCCCCGGGCAACCGGCCCCCGTTTCTTCTTGGCCC.AAATACGCC.GGGGGTCC.GGGGGC.GGAGCCCCC..GGCGGGGGgccgcgcggccgcgc                                                                            >  2:1060476/1‑101 (MQ=255)


                             cggcgCAAGGCCCCCCGGGCAACCGGCCCCCGTTTCTTCTTGGCCC.AAATACGCC.GGGGGTCC.GGGGGC.GGAGCCCCC..GGCGGGGCggcgggcggggggcc                                                                            >  1:3048599/1‑95 (MQ=18)


                                 gcAAGGCCCCCCGGGCAACCGGCCCCCGTTTCTTCTTGGCCC.AAATACGCC.GGGGGTCC.GGGGGC.GGAGCCCCC..GGCGGGGCggcgcgcgggcgcgccggg                                                                        >  1:2981420/1‑97 (MQ=18)


                                  cAAGGCCCCCCGGGCAACCGGCCCCCGTTTCTTCTTGGCCC.AAATACGCC.GGGGGTCC.GGGGGC.GGAGCCCCC..GGCGGGGCGCCGCGCGGGCGCGC.GGC.Ga                                                                     >  2:1728808/1‑101 (MQ=255)


                                  cAAGGCCCCCCGGGCAACCGGCCCCCGTTTCGTCTTGGCCC.AAATACGCC.GGGGGTCC.GGGGGC.GGAGCCCCC..GGCGGGGCGCCGCGCGGCCGCgc.cgc.gg                                                                     >  1:4479152/1‑100 (MQ=255)


                                   aaGGCCCCCCGGGCAACCGGCCCCCGTTTCTTCTTGGCCC.AAATACGCC.GGGGGTCC.GGGGGC.GGAGCCCCC..GGCGGGGGGGCGCCCGGGCGCgc.ggc.gga                                                                    >  2:564755/1‑99 (MQ=17)


                                   aaGGCCCCCCGGGCAACCGGCCCCCGTTTCTTCTTGGCCC.AAATACGCC.GGGGGTCC.GGGGGC.GGAGCCCCC..GGCGGGGCGCCGGGCCGGCGCcc.gcc.gga                                                                    >  2:3970114/1‑99 (MQ=17)


                                    gggCCCCCGGGCCACCCGGCCCCGGTTTCTGCTGGGCGA.AAACCCGCG.GGGGGTCG.GGGGGG.GGGGCCCCC..GGCGGGTCGCCGCGCGGCCGCGC.GGC.Gaaa                                                                   <  1:3262919/100‑1 (MQ=9)


                                    aGGCCCCCCGGGCAACCGGCCCCCGTTTCTTCTTGGCCC.AAATACGCC.GGGGGTCC.GGGGGC.GGAGCCCCC..GGCGGGGGGccgcgcggccgcgc.gggggaa                                                                    >  1:602480/1‑96 (MQ=255)


                                      ccccccgGGGCCCCCCGCCCCCTTTTTCTTTGGGCCC.AAACGCGGG.GGGGGGGG.GGGGGG.GGGCCCCCCG.GGCGGGTCGCCGCGCGGCCGCGC.GGC.GAAAc                                                                  <  1:4745071/100‑1 (MQ=2)


                                       ccccccGGGCCCCCGGCCCCCGTTTTTTCTTGGCCC.AAAGCCGGC.GGGGGGCC.GGGGGG.GGGGCCCCCG.GGCGGGTCGCCGCGCGGCCGCGC.GGC.GAAACa                                                                 <  1:1558632/101‑1 (MQ=11)


                                       ccccccGGGCAACCGGCCCCCGTTTCTTCTGGGCCC.AAATACGCC.GGGGGTCC.GGGGGC.GGAGCCCCC..GGCGGGGCGCGCGGCGGCCGCGC.CGG.GGAACaa                                                                >  1:4492340/1‑101 (MQ=17)


                                         cccgGGCCACCCGCCCCCCTTTTCTTCTGGCCCA.AAACCCGCG.GGGGGCCG.GGGGGC.GGACCCCCG..GGCGGGTCGCCGCGCGGCCGCGC.GGC.GAAACAAAg                                                              <  2:4773814/101‑1 (MQ=9)


                                         ccccGGGCCCGCCGCCCCCGTTTTTTC.GGGCCC.AAAAGCGCG.GGGGGGGC.GGGGGG.GGGCCCCCCCGGGCGGGTCGCCGCGCGGCCGCGC.GGC.GAAACaaa                                                               <  1:359346/101‑1 (MQ=2)


                                            cGGGCCCCCGCCCCCGGTTTCTTCTGGCCCA.AAATCCGCG.GGGGGCCG.GGGGGC.GGACCCCCC..GGCGGGTCGCCGCGCGGCCGCGC.GGC.GAAACAAAGgac                                                           <  1:564834/101‑1 (MQ=14)


                                             gggCAACCGGCCCCCGTTTCTTCTTGGCCC.AAATACGCC.GGGGGTCC.GGGGGC.GGAGCCCCC..GGCGGGGCGCCCCGCGGCCGCGC.GGC.GCGAAAAAAgacc                                                          >  1:3248423/1‑101 (MQ=14)


                                                cAACCGGCCCCCGTTTCTTCTTGGCCC.AAATACGCC.GGGGGTCC.GGGGGC.GGAGCCCCC..GGCGGGGCGCCGCGCGGGCGCGC.GGC.GGAACAAAAgaccc.ac                                                      >  2:4668684/1‑101 (MQ=17)


                                                      gCCCCCGTTTCTTCTTGGCCC.AAATACGCC.GGGGGTCC.GGGGGC.GGAGCCCCC..GGCGGGGCGCCGCGCGGGCGCGC.GGC.GGAACAAAAGACCC.ACC.GGGcg                                               >  1:2054420/1‑100 (MQ=17)


                                                      gCCCCCGTTTCTTCTTGGCCC.AAATACGCC.GGGGGTCC.GGGGGC.GGAGCCCCC..GGCGGGGAGCCACACGGCGCCGC.GGG.CCAAAAAACGAACG.CCC.gggac                                               >  1:3500198/1‑99 (MQ=2)


                                                       cccccGTTTTCTTTTGGCCC.AAAGTCGGC.GGGGGGTC.GGGGGCGGGCGCCCCC..GGCGGGTCGCCGCGCGGCCGCGC.GGC.GAAACAAAGGACCG.ACC.GGGCa                                               <  2:4788516/101‑1 (MQ=17)


                                                        ccccGTTTCTTCTTGGCCC.AAATACGCC.GGGGGTCC.GGGGGC.GGAGCCCCC..GGCGGGGGGCCGCGCGGGCGCCG.GGG.GGGACAAAAGACCC.ACC.cgggcgc                                             >  1:2624912/1‑97 (MQ=11)


                                                          ccctttCTTTCTGGCCC.CAAGGCGGCGGGGGGTCG.GGGGGC.GGGCCCCCG..GGCGGGTCGCCGCGCGGCCGCGC.GGC.GAAACAAAGGACCG.ACC.GGGCAGcc                                            <  2:2065538/98‑1 (MQ=16)


                                                          ccGTTTCTTCTTGGCCC.AAATACGCC.GGGGGTCC.GGGGGC.GGAGCCCCC..GGCGGGGCGCCGCGCGGGCGCGC.GGC.GGAACAAAAGAGCC.ACC.GGGCGGccc                                           >  1:1126329/1‑101 (MQ=17)


                                                           cGTTTCTTCTTGGCCC.AAATACGCC.GGGGGTCC.GGGGGC.GGAGCCCCC..GGCGGGGGGCCGCGCGGCCGCGC.GGC.GGAACAAAAGACCG.ACC.CGGCAGcccc                                          >  2:577538/1‑101 (MQ=18)


                                                           cGTTTCTTCTTGGCCC.AAATACGCC.GGGGGTCC.GGGGGC.GGAGCCCCC..GGCGGGGCGCCGCGCGGCCGCGC.GGC.GGAAAAAAAGAACG.ACC.GGGCAGcccc                                          >  2:477515/1‑101 (MQ=17)


                                                            gTTTCTTCTTGGCCC.AAATACGCC.GGGGGTCC.GGGGGC.GGAGCCCCC..GGCGGGGGGCCGCGCGGCCCCGC.GGC.GGAACAAAAGACCG.AAC.GGGCAGgcccc                                         >  2:4420898/1‑101 (MQ=17)


                                                             tttCTTCTTGGCCC.AAATACGCC.GGGGGTCC.GGGGGC.GGAGCCCCC..GGCGGGGGGCCGCCCGGCCGCGC.GGC.GGAACAAAAGACCG.AAC.GGGCCGgccccc                                        >  2:2336150/1‑101 (MQ=17)


                                                             tttCTTCTTGGCCC.AAATACGCC.GGGGGTCC.GGGGGC.GGAGCCCCC..GGCGGGGCGCCGCCCGGGCGCGC.GGG.GGAACAAAACAGCC.ACC.GCGGCGcccccc                                        >  1:4470947/1‑101 (MQ=14)


                                                             tttCTTCTTGGCCC.AAACACGCC.GGGGGTCC.GGGGGC.GGAGCCCCC..GGCGGGTCGCCGCGCGGCCGCGC.GGC.GAAACAAAGGACCG.ACC.GGGCAGcccccc                                        <  2:3225190/101‑1 (MQ=255)


                                                              ttcttcTTGGCCC.AAATACGCC.GGGGGTCC.GGGGGC.GGAGCCCCC..GGCGGGTCGCCGCGCGGCCGCGC.GGC.GAAACAAAGGACCG.ACC.GGGCAGCCCCCCg                                       <  2:2401713/101‑1 (MQ=255)


                                                              ttcttcTTGGCCC.AAATACGCC.GGGGGTCC.GGGGGC.GGAGCCCCC..GGCGGGGCGCCGCGCGGCCGCGC.GGG.GGAACAAAAGACCG.ACC.GGGGAGccccccc                                       >  1:1438317/1‑100 (MQ=18)


                                                               tcttctTGGCCC.AAATACGCC.GGGGGTCC.GGGGGC.GGAGCCCCC..GGCGGGGCGCCGCCCGGCCGCGC.GGC.GCGAAAAAAGACCG.ACC.GGGGGGcccccccc                                      >  1:159329/1‑99 (MQ=14)


                                                                 ttcttGGCCC.AAATACGCC.GGGGGTCC.GGGGGC.GGAGCCCCC..GGCGGGGGGCCGCGCGGCCCCGC.GGC.GGAACAAAAGAACG.ACC.CGGCAGcccccccgcc                                    >  1:2513781/1‑97 (MQ=17)


                                                                  tcttGGCCC.AAATACGCC.GGGGGTCC.GGGGGC.GGAGCCCCC..GGCGGGGGGCCGCGCGGCCGCGC.GGC.GGAACAAAGGAACG.ACC.GGGGGGcccccccgccc                                   >  1:3029863/1‑96 (MQ=17)


                                                                  tcttGGCCC.AAATACGCC.GGGGGTCC.GGGGGC.GGAGCCCCC..GGCGGGGGGCCCCGCGGGCGCGC.GGCGGAAAAAAAGAACGA.ACC.GGGCGACCCCCCggcg                                    >  2:4588113/1‑99 (MQ=9)


                                                                    ctGGCCG.AAAATCGGC.GGGGGGCCGGGGGGC.GGACCCCCG..GGCGGGTCGCCGCGCGGCCGCGC.GGC.GAAACAAAGGACCG.ACC.GGGCAGCCCCCCGGTCgg                                  <  1:810675/100‑1 (MQ=21)


                                                                      ggCCC.AAATACGCC.GGGGGTCC.GGGGGC.GGAGCCCCC..GGCGGGGCGGCGCGCGGCCGCGC.GGG.GGAACAAAAGAACG.ACC.GGGGCGCCCCCCCGCCGGccc                               >  1:4837154/1‑100 (MQ=17)


                                                                      ggCCC.AAATACGCC.GGGGGTCC.GGGGGC.GGAGCCCCC..GGCGGGGCGCCGCGCGGCCCCGC.GGC.GGAACAAAAGACCG.ACC.GGGCACccccccccgcggccc                               >  1:3734276/1‑92 (MQ=17)


                                                                       gcccaaaggccGCG.GGGGGCCG.GGGGGC.GGGCCCCCG..GGCGGGTCGCCGCGCGGCCGCGC.GGC.GAAACAAAGGACCG.ACC.GGGCAGCCCCCCGGTCGGCCa                               <  1:2130475/91‑1 (MQ=21)


                                                                         ccaaagggcGCG.GGGGGCCG.GGGGGC.GGCCCCCCG..GGCGGGTCGCCGCGCGGCCGCGC.GGC.GAAACAAAGGACCG.ACC.GGGCAGCCCCCCGGTCGGCCAGt                             <  2:3749104/93‑1 (MQ=25)


                                                                          caaaacgcggc.GGGGGGCC.GGGGGG.GGCGCCCCC..GGCGGGTCGCCGCGCGGCCGCGC.GGC.GAAACAAAGGACCG.ACC.GGGCAGCCCCCCGGTCGGCCAGTg                            <  2:3063098/91‑1 (MQ=25)


                                                                          c.AAATACGCC.GGGGGTCC.GGGGGC.GGAGCCCCC..GGCGGGGCGCCGCGCGGCCGCGC.GGC.GGAACAAAAGAACG.ACC.CGGCAGCCCCCCGGGCGGCCAGTGa                           >  2:1366203/1‑101 (MQ=18)


                                                                            aaaTACGCC.GGGGGTCC.GGGGGC.GGAGCCCCC..GGCGGGGGGCCCCGCCGCCGCGC.GGC.GGAACAAAAGACCG.ACC.CGGCCGCCCCCCCGGCgggccgggaa                          >  2:2232435/1‑93 (MQ=12)


                                                                             aagccGCG.GGGGGCCG.GGGGGC.GGCCCCCCG..GGCGGGTCGCCGCGCGGCCGCGC.GGC.GAAACAAAGGACCG.ACC.GGGCAGCCCCCCGGTCGGCCAGTGAAc                         <  2:5050005/97‑1 (MQ=25)


                                                                             aaTACGCC.GGGGGTCC.GGGGGC.GGAGCCCCC..GGCGGGGGGCCGCGCGGGCGCGC.GGG.GGAACAAAAGAACGAACC.GGGAGGCCCCCCGGCCGCccggggac                          >  2:4501998/1‑95 (MQ=9)


                                                                             aaTACGCC.GGGGGTCC.GGGGGC.GGAGCCCCC..GGCGGGGCGCCGCGCGGGCGCGC.GGC.GGAACAAAAGAACG.ACCGGGGCGGCCCCCCGG.CGGGCAGGGAAc                         >  2:3670262/1‑101 (MQ=17)


                                                                             aaTACGCC.GGGGGTCC.GGGGGC.GGAGCCCCC..GGCGGGGCGCCGCGCGGCCGCGC.GGG.GGAAAAAAAGACCC.ACC.GGGCCGCCCCCCCGGCGGcccggggac                         >  1:3503394/1‑94 (MQ=17)


                                                                               accggc.GGGGGGCC.GGGGGG.GGGGCCCCCG.GGCGGGTCGCCGCGCGGCCGCGC.GGC.GAAACAAAGGACCG.ACC.GGGCAGCCCCCCGGTCGGCCAGTGAAcc                        <  1:594058/96‑1 (MQ=25)


                                                                                aCGCC.GGGGGTCC.GGGGGC.GGAGCCCCC..GGCGGGTCGCCGGGCGGCCGCGC.CGC.GGCACAAACGCGAG.ACC.CCGGAGCCCCCCCCTCGGCCAGAGAAccca                      >  1:5047173/1‑100 (MQ=9)


                                                                                aCGCC.GGGGGTCC.AGGGGC.GGAGCCCCC..GGCGGGGGGCCCGGCGGCCGCGCGGGG.GAAAAAAAGACCCA.ACC.GGGAAGCCCCCCGGGGGGCCAG.GAACCCg                      >  2:2881707/1‑101 (MQ=12)


                                                                                  gCC.GGGGGTCC.GGGGGC.GGAGCCCCC..GGCGGGGCGCCGCGCGGGCGCGC.GGC.GAAAAAAAAGACCC.ACC.CGGCAGCCCCCCGGGCGGGCCGTGGAACCgca                    >  2:2108827/1‑99 (MQ=17)


                                                                                    c.GGGGGTCC.GGGGGC.GGAGCCCCC..GGCGGGGCCGCGCGGGGGCGCGC.GGC.GGAACAAAAGACCG.ACC.GGGCAGGCCCCCCGGCGGCCCGGGAAACCGaaaa                  >  2:2394065/1‑100 (MQ=16)


                                                                                      gggggTCC.GGGGGC.GGAGCCCCC..GGCGGGGCGGCGCGCGGGCGCGC.GGG.GGAACAAAAGACCG.CCC.CGGGAGGCCCCCCGCCGGCCCGGGAAccccacaac                 >  2:65735/1‑95 (MQ=12)


                                                                                      gggggTCC.GGGGGC.GGAGCCCCC..GGCGGGGCGCCGCCCGGCCGCGC.GGC.GGAACAAAAGAACG.ACC.GGGCAGCCCCCCCGCCGGCCCGGGAAACCCaaaac                 >  1:4698820/1‑99 (MQ=18)


                                                                                       ggggTCC.GGGGGC.GGAGCCCCC..GGCGGGTCGCCGCGCGGCCCCGC.GGC.GGAACAAAAGACCG.ACC.GGGCAGCCCCCCCGCCGGCCCGGGGACCCGCAAccc                >  1:2237811/1‑99 (MQ=18)


                                                                                        gggTCC.GGGGGC.GGAGCCCCC..GGCGGGGCGCCGCGCGGCCGCGC.GGC.GGAACAAAAGACCG.ACC.GGGCAGCCCCCCGGGCGGCCAGCGAACCCGCAAcgc.g              >  2:4818504/1‑101 (MQ=25)


                                                                                         ggTCC.GGGGGC.GGAGCCCCC..GGCGGGTCGCCGCGCGGCCGCGC.GGC.GAAACAAAGGACCG.ACC.GGGCAGCCCCCCGGTCGGCCAGTGAACCCGAAACGC.Ga             <  2:4101676/101‑1 (MQ=255)


                                                                                          gggcggggggG.GGCCCCCCG..GGCGGGTCGCCGCGCGGCCGCGC.GGC.GAAACAAAGGACCG.ACC.GGGCAGCCCCCCGGTCGGCCAGTGAACCCGAAACGC.Ga             <  2:4976707/96‑1 (MQ=38)


                                                                                          ggccggggggC.GGCGCCCCC..GGCGGGTCGCCGCGCGGCCGCGC.GGC.GAAACAAAGGACCG.ACC.GGGCAGCCCCCCGGTCGGCCAGTGAACCCGAAACGC.Ga             <  2:319579/96‑1 (MQ=255)


                                                                                           tCC.GGGGGC.GGGCCCCCC..GGCGGGTCGCCGCGCGGCCGCGC.GGC.GAAACAAAGGACCG.ACC.GGGCAGCCCCCCGGTCGGCCAGTGAACCCGAAACGC.GAAg           <  2:1144984/101‑1 (MQ=255)


                                                                                            cc.GGGGGC.GGAGCCCCC..GGCGGGGCGCCGCGCGGCCGCGC.GGG.GGAAAAAAGGACCG.ACC.CGGCCGCCCCCCCGGCGGCCCGGGAACCCCAAACGC.GAAgg          >  1:1237373/1‑101 (MQ=21)


                                                                                             c.GGGGGC.GGAGCCCCC..GGCGGGGCGCCGCGCGGCCGCGC.GGG.GGAACAAAAGACCG.ACC.GGGCAGCCCCCCCGCCGGCCCGGGGACCCCCAACGC.GAAggg         >  1:2876115/1‑101 (MQ=21)


                                                                                             c.GGGGGC.GGAGCCCCC..GGCGGGGCGCCGCGCGGCCGCGC.GGC.GGAACAAAAGACCG.ACC.GGGCCGCCCCCCGGGCGGCCCGGGGACCCGAAACGC.GAAggg         >  1:298551/1‑101 (MQ=25)


                                                                                             c.GGGGGC.GGAGCCCCC..GGCGGGGCGCCGCGCGGCCCCGC.GGC.GGAACAAAAGACCG.ACC.GGGCAGCCCCCCCGGCGGCCCGTGAACCCGCAACGC.GAAggg         >  1:1616311/1‑101 (MQ=25)


                                                                                              ggggggG.GGCCCCCCG..GGCGGGTCGCCGCGCGGCCGCGC.GGC.GAAACAAAGGACCG.ACC.GGGCAGCCCCCCGGTCGGCCAGTGAACCCGAAACGC.GAAggg         <  1:1783484/100‑1 (MQ=38)


                                                                                               gggggC.GGAGCCCCC..GGCGGGTCGCCCCCCGGGCGCGC.GGC.GGAAAAAAAGACCC.ACC.CGGGAGGCCCCCCGCCGGCCACTGAACCCCAAAcgccgcggga         >  2:44585/1‑94 (MQ=12)


                                                                                                ggggG.GGACCCCCC..GGCGGGTCGCCGCGCGGCCGCGC.GGC.GAAACAAAGGACCG.ACC.GGGCAGCCCCCCGGTCGGCCAGTGAACCCGAAACGC.GAAGGGAc       <  1:5048783/101‑1 (MQ=255)


                                                                                                 gggC.GGCGCCCCC..GGCGGGTCGCCGCGCGGCCGCGC.GGC.GAAACAAAGGACCG.ACC.GGGCAGCCCCCCGGTCGGCCAGTGAACCCGAAACGC.GAAGGGAcg      <  2:1303914/101‑1 (MQ=255)


                                                                                                 gggC.GGAGCCCCC..GGCGGGGCGCCGCGCGGCCGCGC.GGC.GAAACAAAAGACCG.ACC.CGGCAGCCCCCCGGGCGGCCCGTGAACCCCAAACGCGGAAgggcg       >  2:4844744/1‑99 (MQ=25)


                                                                                                    c.GGAGCCCCC..GGCGGGTCGCCGCGCGGCCGCGC.GGC.GGAACAAAAGACCG.ACC.GGGCAGGCCCCCGGCCGGCCAGTGAACCCGAAACGC.GAAGGGACGCgg   >  2:3239977/1‑101 (MQ=38)


                                                                                                      ggAGCCCCC..GGCGGGTCCCCGCGCGGCCGCGC.GGG.GAAACAAAAGAGCG.ACC.GGGGAGGCCCCCGGGCGGCCCAGGAAACCCAAACGA.CAAGGGACGCggg  >  2:4513327/1‑101 (MQ=16)


                                                                                                      ggAGCCCCC..GGCGGGGCGCCGCGCGGGCGCGC.GGC.GGAACAAAAGACCG.ACCGGGGCGCCCCCCCGGCCGGCC.GGGAACCCCCAAAGC.GAAAGGGCGCggg  >  2:37742/1‑101 (MQ=255)


                                                                                                      ggAGCCCCC..GGCGGGGCGCCGCGCCGCCCCGC.GGC.GAAAAAAAGGACGG.AAC.GGGCAGCCCCCCCGCCCGGCCGGGGACCCCAAACGC.GAAggggagccgg  >  2:3313133/1‑94 (MQ=255)


AGCCTGCACGACGGGGGCAAGGGGCAATGCGGCGCAAGGCCCCCCGGGCAACCGGCCCCCGTTTCTTCTTGGCCC.AAATACGCC.GGGGGTCC.GGGGGC.GGAGCCCCC..GGCGGGTCGCCGCGCGGCCGCGC.GGC.GAAACAAAGGACCG.ACC.GGGCAGCCCCCCGGTCGGCCAGTGAACCCGAAACGC.GAAGGGACGCGGG  >  NC_014034/3276282‑3276480

Base quality scores:


ATCG

< 3 ≤


ATCG

< 20 ≤


ATCG

< 31 ≤


ATCG

< 34 ≤


ATCG

< 41 ≤


ATCG