BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	2148805 =	192 (0.870)	2 (0.010)	2/180	28.3	0.01	coding (230/369 nt)	RCAP_rcc01992	hypothetical protein
*	?	NC_014034	= 3278986	231 (0.940)	2 (0.010)	2/180	28.3	0.01	coding (377/1581 nt)	cydA	cytochrome d ubiquinol oxidase subunit I
Rejected: Position hash score below cutoff.

Only 100 of 250 total aligned reads displayed.


CGGCGCCGACCGGG.TTCTGCATCCAGCCATTCGCGATCAGGATCCACAAGGCCGAG.AAGTTCGAGCCGATGGCGACGCCCCAGGCCACCAGCATATGCGCCCGCGCCGTCAGCTTCTCCCAGCCGAAGAACCAGATCCCGACCAGCGTGGCTTCCAGAAAGAACGCCATCAGCCCCTCGATGGCGAGCGGCGCCCCGAA  >  NC_014034/3278888‑3279086


gggCCCCGACGGGT.TTCTGAATCCCCCCATTCGCGATCAGGATCCACAAGGCAGAG.AAGTTGGAGCCGATGGCGACGCCCCAGGCCACCAGCATATGCGcc                                                                                                    <  2:704801/100‑1 (MQ=255)


cGGCCCCGACCGGT.TTCTCCATCCACCCATTCGCGATCAGGACCCACAAGGCCGAG.AAGTGCGAGCCGATGGCGACGCCCCAGGCCACCAGCATATGCGcc                                                                                                    <  2:4625908/101‑1 (MQ=255)


 ggCGCCGACCGGG.TTCTGCATCCAGCCATTCGCGATCAGGATCCACAAGGCCGAG.AAGTTCGAGCCGATGGCGACGCCCCAGGCCACCAGCATATGCGccc                                                                                                   >  2:2771653/1‑101 (MQ=255)


  gcgcCGACCGGG.TTCTGCATCCAGCCATTCGCGATCAGGATCCACAAGGCCGAG.AAGTTCGAGCCGATGGCGACGCCCCAGGCCACCAGCATATGCGCCcg                                                                                                  >  2:2849015/1‑101 (MQ=255)


    gcCGACCGGG.TTCTGCATCCAGCCATTCGCGATCAGGATCCACAAGGCCGAG.AAGTTCGAGCCGATGGCGACGCCCCAGGCCACCAGCATATGCGCCcgcg                                                                                                >  2:4047093/1‑101 (MQ=255)


     ccGCCCGGG.TTCTGCCCCCAGCCATTCGCGATCAGGATCCACAAGGCCGAG.AAGTTGGAGCCGATGGCGACGCCCCAGGCCACCAGCATATGCGCCCgcgc                                                                                               <  2:1209769/101‑1 (MQ=255)


      cgccgggg.TTCTCCACCCAGCCATCCGCGATCAGGATCCACAAGGCCGAG.AAGTTCGAGCCGATGGCGACGACCCAGGCCACCAGCATATGCGCCCGCGcc                                                                                              <  1:3493215/96‑1 (MQ=255)


      cgcccGGG.TTCTGCATCCAGCCATTCGCGATCAGGATCCACAAGGCCGAG.AAGTTGGAGCCGATGGCGACGCCCCAGGCCACCAGCATATGCGCCCGCGcc                                                                                              <  2:3823083/98‑1 (MQ=255)


       ggcgggg.TGCTACATCCAGCCATGCGCAATAAGGATCCACAGGGCCGAG.AAGTGCGAGCCGATGGCGACGCCCCAGGCCACCAGCATATGCGCCCGCGCCg                                                                                             <  1:3209276/97‑1 (MQ=255)


       gACCGGG.TTCTGCATCCAGCCATTCGCGATCAGGATCCACAAGGCCGAG.AAGTTCGAGCCGATGGCGACGCCCCAGGCCACCAGCATATGCGCCCGCGCCg                                                                                             >  2:1704412/1‑101 (MQ=255)


         ccGGGTTTCTCCACCCACCCATTCGCAATCGGGACCCACAGGCCGGAG.AAGTTGGAGCCGATGGCGACGCCCCAGGCCACCAGCATATGCGCCCGCGCCGt                                                                                            <  1:1717875/101‑1 (MQ=255)


         ccGGG.TTCTGCATCCAGCCATTCGCGATCAGGATCCACAAGGCCGAG.AAGTTGGAGCCGATGGCGACGCCCCAGGCCACCAGCATATGCGCCCGCGCCGTc                                                                                           <  1:4111368/101‑1 (MQ=255)


         ccGGG.TTCTGCACCCAGCCATTCGCGATCAGGATCCACAAGGCCGAG.AAGTGCGAGCCGATGGCGACGCCCCAGGCCACCAGCATATGCGCCCGCGCCGTc                                                                                           <  1:390765/101‑1 (MQ=255)


         ccGGG.TTCTGCACCCAGCCATTCGCGATCAGGACCCACAAGCCCGAG.AAGTTCGAGCCGATGGCGACGCCCCAGGCCACCAGCATATGCGCCCGCGCCGTc                                                                                           <  1:1757747/101‑1 (MQ=255)


           ggg.TTCTGCATCCAGCCATTCGCGATCAGGATCCACAAGGCCGAG.AAGTTCGAGCCGATGGCGACGCCCCAGGCCACCAGCATATGCGCCCGCGCCGTCAg                                                                                         >  1:573313/1‑101 (MQ=255)


           ggg.TTCTGCATCCAGCCATTCGCGACCAGGATCCAAAAGGCGGAG.AGGTTCGAGCCGATGGCGCCGCCCCAGGCCACCACCATAGGGCCCCGCCCGGTCAg                                                                                         >  2:1830984/1‑101 (MQ=255)


            gg.TTCTGCATCCAGCCATTCGCGATCAGGATCCACAAGGCCGAG.AAGTTCGAGCCGATGGCGACGCCCCAGGCCACCAGCATATGCGCCCGCGCCGTCAGc                                                                                        >  1:74791/1‑101 (MQ=255)


              gttcgtcttCCAGCCATTCGCGATCGGGATCAACAAGGCCGAG.AAGTGCGAGCCGATGGCGACGCCCCAGGCCACCAGCATATGCGCCCGCGCCGTCAGCt                                                                                       <  1:2404510/93‑1 (MQ=255)


               ttCTGCACCCAGCCATTCGCGATCAGGATCCACAAGGCCGAG.AAGTTCGAGCCGATGGCGACGCCCCAGGCCACCAGCATATGCGCCCGCGCCGTCAGCtt                                                                                      <  2:2679325/101‑1 (MQ=255)


                tCTGCATCCAGCCATTCGCGATCAGGATCCACAAGGCCGAG.AAGTTCGAGCCGATGGCGACGCCCCAGGCCACCAGCATATGCGCCCGCGCCGTCAGCTtc                                                                                     >  2:2141661/1‑101 (MQ=255)


                tCTGCACCCAGCCATTCGCGATCAGGATCCACAAGGCCGAG.AAGTTGGAGCCGATGGCGACGCCCCAGGCCACCAGCATATGCGCCCGCGCCGTCAGCTtc                                                                                     <  1:1093756/101‑1 (MQ=255)


                 cTGCATCCAGCCATTCGCGATCAGGATCCACAAGGCCGAG.AAGTTCGAGCCGATGGCGACGCCCCAGGCCACCAGCATATGCGCCCGCGCCGTCAGCTtct                                                                                    >  1:3150767/1‑101 (MQ=255)


                 cTGCACCCAGCCGTTCGCGATAAGGACCCACAAGGCCGAG.AAGTTCGAGCCGATGGCGACGCCCCAGGCCACCAGCATATGCGCCCGCGCCGTCAGCTtct                                                                                    <  2:2384130/101‑1 (MQ=255)


                   gCATCCAGCCATTCGCGATCAGGATCCACAAGGCCGAG.AAGTTCGAGCCGATGGCGACGCCCCAGGCCACCAGCATATGCGCCCGCGCCGTCAGCTTCTcc                                                                                  >  1:265721/1‑101 (MQ=255)


                    cacccAGCCATTCGCGATCAGGATCCACAAGGCCGAG.AATTTGGAGCCGATGGCGACGCCCCAGGCCACCAGCATATGCGCCCGCGCCGTCAGCTTCTccc                                                                                 <  1:650343/98‑1 (MQ=255)


                    cATCCAGCCATTCGCGATCAGGATCCACAAGGCCGAG.AAGTTCGAGCCGATGGCGACGCCCCAGGCCACCAGCATATGCGCCCGCGCCGTCAGCTTCTccc                                                                                 >  1:1006514/1‑101 (MQ=255)


                    cATCCAGCCATTCGCGATCAGGATCCACAAGGCCGAG.AAGTTCGAGCCGATGGCGACGCCCCAGGCCACCAGCATATGCGCCCGCGCCGTCAGCTTCTccc                                                                                 >  1:318648/1‑101 (MQ=255)


                     acccAGCCATCCGCGATCAGGATCCACAAGGCGGAG.AAGTTCGAGCCGATGGCGACGCCCCAGGCCACCAGCATATGCGCCCGCGCCGTCAGCTTCTCCCa                                                                                <  2:1008974/99‑1 (MQ=255)


                     aTCCAGCCATTCGCGATCAGGATCCACAAGGCCGAG.AAGTTCGAGCCGATGGCGACGCCCCAGGCCACCAGCATATGCGCCCGCGCCGTCAGCTTCTCCCa                                                                                >  1:923436/1‑101 (MQ=255)


                       ccAGCCATTCGCGATCAGGATCCACAAGCCCGAG.AAGTTCGAGCCGATGGCGACGCCCCAGGCCACCAGCATATGCGCCCGCGCCGTCAGCTTCTCCCAGc                                                                              <  2:3072801/101‑1 (MQ=255)


                         aGCCATCCGCGATCAGGACCCACAAGGCCGAA.AAGTGGGAGCCGATGGCGACGCCCCAGGCCACCAGCATATGCGCCCGCGCCGTCAGCTTCTCCCAGCCg                                                                            <  1:668109/101‑1 (MQ=255)


                           ccATTCGCGATCAGGATCCACAAGGCCGAG.AAGTTCGAGCCGATGGCGACGCCCCAGGCCACCAGCATATGCGCCCGCGCCGTCAGCTTCTCCCAGCCgaa                                                                          >  1:1513294/1‑101 (MQ=255)


                           ccATTCGCGATCAGGATCCACAAGGCCGAG.AAGTTCGAGCCGATGGCGACGCCCCAGGCCACCAGCATATGCGCCCGCGCCGTCAGCTTCTCCCAGCCgaa                                                                          >  1:4253983/1‑101 (MQ=255)


                               cggggATCGGGACCCACAAGCCCGAG.AAGTGGGAGCCGATGGCGACGCCCCAGGCCACCAGCATATGCGCCCGCGCCGTCAGCTTCTCCCAGCCGAAGAAc                                                                      <  2:2845168/97‑1 (MQ=255)


                                cgcgATCAGGATCCACAAGGCCGAG.AAGTTCGAGCCGATGGCGACGCCCCAGGCCACCAGCATATGCGCCCGCGCCGTCAGCTTCTCCCAGCCGAAGAAcc                                                                     >  2:3323469/1‑101 (MQ=255)


                                  cgATCAGGATCCACAAGGCCGAG.AAGTTCGAGCCGATGGCGACGCCCCAGGCCACCAGCATATGCGCCCGCGCCGTCAGCTTCTCCCAGCCGAAGAACCAg                                                                   <  1:3314242/101‑1 (MQ=255)


                                   gATCAGGATCCACAAGGCCGAG.AAGTTCGAGCCGATGGCGACGCCCCAGGCCACCAGCATATGCGCCCGCGCCGTCAGCTTCTCCCAGCCGAAGAACCAGa                                                                  >  2:850679/1‑101 (MQ=255)


                                   gATCAGGATCCACAAGGCCGAG.AAGTTCGAGCCGATGGCGACGCCCCAGGCCACCAGCATATGCGCCCGCGCCGTCAGCTTCTCCCAGCCGAAGAACCAGa                                                                  >  1:216508/1‑101 (MQ=255)


                                   gATCAGGACCCAAAAGGCCGAG.AAGTTGGAGCCGATGGCGACGCCCCAGGCCACCAGCATATGCGCCCGCGCCGTCAGCTTCTCCCAGCCGAAGAACCAGa                                                                  <  1:1989341/101‑1 (MQ=255)


                                    aTCAGGATCCACAAGGCCGAG.AAGTTCGAGCCGATGGCGACGCCCCAGGCCACCAGCATATGCGCCCGCGCCGTCAGCTTCTCCCAGCCGAAGAACCAGAt                                                                 >  2:3157031/1‑101 (MQ=255)


                                    aTCAGGATCCACAAGGCCGAG.AAGTTCGAGCCGATGGCGACGCCCCAGGCCACCAGCATATGCGCCCGCGCCGTCAGCTTCTCCCAGCCGAAGAACCAGAt                                                                 >  1:2878482/1‑101 (MQ=255)


                                     tCAGGATCCACAAGGCCGAG.AAGTTCGAGCCGATGGCGACGCCCCAGGCCACCAGCATATGCGCCCGCGCCGTCAGCTTCTCCCAGCCGAAGAACCAGATc                                                                >  1:4201494/1‑101 (MQ=255)


                                     tCAGGATCCACAAGGCCGAG.AAGTTCGAGCCGATGGCGACGCCCCAGGCCACCAGCATATGCGCCCGCGCCGTCAGCTTCTCCCAGCCGAAGAACCAGATc                                                                >  2:1471875/1‑101 (MQ=255)


                                      cAGGATCCACAAGGCCGAG.AAGTTCGAGCCGATGGCGACGCCCCAGGCCACCAGCATATGCGCCCGCGCCGTCAGCTTCTCCCAGCCGAAGAACCAGATcc                                                               >  2:3240905/1‑101 (MQ=255)


                                       aGGATCCACAAGGCCGAG.AAGTTCGAGCCGATGGCGACGCCCCAGGCCACCAGCATATGCGCCCGCGCCGTCAGCTTCTCCCAGCCGAAGAACCAGATccc                                                              >  1:3410267/1‑101 (MQ=255)


                                       aGGACCCACAGGGCGGAG.AAGTCGGAGCCGATGGCGACGCCCCAGGCCACCAGCATATGCGCCCGCGCCGTCAGCTTCTCCCAGCCGAAGAACCAGATccc                                                              <  1:437967/101‑1 (MQ=255)


                                        ggACCCACAAGGCCGAG.AAGTTCGAGCCGATGGCGACGCCCCAGGCCACCAGCATATGCGCCCGCGCCGTCAGCTTCTCCCAGCCGAAGAACCAGATCCCg                                                             <  1:445526/101‑1 (MQ=255)


                                        gaacccaaagggCGGAG.AGGCTGGAGCCGATGGCGACGCCCCAGGCCACCAGCATATGCGCCCGCGCCGTCAGCTTCTCCCAGCCGAAGAACCAGATCCCg                                                             <  2:4898862/91‑1 (MQ=255)


                                         gacccccaAGGCCGGGAAATTTGGAGCCGATGGCGACGCCCCAGGCCACCAGCATATGCGCCCGCGCCGTCAGCTTCTCCCAGCCGAAGAACCAGATCCCg                                                             <  2:1088853/95‑1 (MQ=255)


                                         gATCCACAAGGCCGAG.AAGTTGGAGCCGATGGCGACGCCCCAGGCCACCAGCATATGCGCCCGCGCCGTCAGCTTCTCCCAGCCGAAGAACCAGATCCCGa                                                            <  2:160162/101‑1 (MQ=255)


                                           cccaaagggCCGAG.AAGTCGGAGCCGATGGCGACGCCCCAGGCCACCAGCATATGCGCCCGCGCCGTCAGCTTCTCCCAGCCGAAGAACCAGATCCCGAcc                                                          <  2:318595/94‑1 (MQ=255)


                                             cacaAGGCGGAG.AAGTGGGAGCCGATGGCGACGCCCCAGGCCACCAGCATATGCGCCCGCGCCGTCAGCTTCTCCCAGCCGAAGAACCAGATCCCGACCAg                                                        <  1:2036014/101‑1 (MQ=255)


                                               caAGGCCGAG.AGTTGGGAGCCGATGGCGACGCCCCAGGCCACCAGCATATGCGCCCGCGCCGTCAGCTTCTCCCAGCCGAAGAACCAGATCCCGACCAGCg                                                      <  1:160213/101‑1 (MQ=255)


                                                agggCCGGG.AAGTGGGAGCCGATGGCGACGCCCCAGGCCACCAGCATATGCGCCCGCGCCGTCAGCTTCTCCCAGCCGAAGAACCAGATCCCGACCAGCGt                                                     <  1:2777058/99‑1 (MQ=255)


                                                aaGGCCGAG.AAGTTCGAGCCGATGGCGACGCCCCAGGCCACCAGCATATGCGCCCGCGCCGTCAGCTTCTCCCAGCCGAAGAACCAGATCCCGACCAGCGt                                                     >  2:3885388/1‑101 (MQ=255)


                                                aaGGCCGAG.AAGTTCGAGCCGATGGCGACGCCCCAGGCCACCAGCATATGCGCCCGCGCCGTCAGCTTCTCCCAGCCGAAGAACCAGATCCCGACCAGCGt                                                     >  2:4959127/1‑101 (MQ=255)


                                                   gCCGAG.AAGTTCGAGCCGATGGCGACGCCCCAGGCCACCAGCATATGCGCCCGCGCCGTCAGCTTCTCCCAGCCGAAGAACCAGATCCAGatcggaagagc                                                  >  1:5012238/1‑91 (MQ=255)


                                                   gCCGAG.AAGTGCGAGCCGATGGCGACGCCCCAGGCCACCAGCATATGCGCCCGCGCCGTCAGCTTCTCCCAGCCGAAGAACCAGATCCCGACCAGCGTGGc                                                  <  1:2494534/101‑1 (MQ=255)


                                                     cGAG.AAGTTCGAGCCGATGGCGACGCCCCAGGCCACCAGCATATGCGCCCGCGCCGTCAGCTTCTCCCAGCCGAAGAACCAGATCCCGACCAGCGTGGCtt                                                >  2:3765620/1‑101 (MQ=255)


                                                      gag.aAGTTCGAGCCGATGGCGACGCCCCAGGCCACCAGCATATGCGCCCGCGCCGTCAGCTTCTCCCAGCCGAAGAACCAGATCCCGACCAGCGTGGCTTc                                               >  2:4202467/1‑101 (MQ=255)


                                                      cgaaaattgggAGCCGATGGCGACGCCCCAGGCCACCAGCATATGCGCCCGCGCCGTCAGCTTCTCCCAGCCGAAGAACCAGATCCCGACCAGCGTGGCtt                                                <  1:1123574/91‑1 (MQ=255)


                                                       ag.aGGTTGGAGCCGATGGCGACGCCCCAGGCCACCAGCATATGCGCCCGCGCCGTCAGCTTCTCCCAGCCGAAGAACCAGATCCCGACCAGCGTGGCTTcc                                              <  1:2256149/101‑1 (MQ=255)


                                                       ag.aAGTTGGAGCCGATGGCGACGCCCCAGGCCACCAGCATATGCGCCCGCGCCGTCAGCTTCTCCCAGCCGAAGAACCAGATCCCGACCAGCGTGGCTTcc                                              <  2:1292775/101‑1 (MQ=255)


                                                         gaggtgcGAGCCGATGGCGACGCCCCAGGCCACCAGCATATGCGCCCGCGCCGTCAGCTTCTCCCAGCCGAAGAACCAGATCCCGACCAGCGTGGCTTCCa                                             <  2:2232451/95‑1 (MQ=255)


                                                          aagtgggAGCCGATGGCGACGCCCCAGGCCACCAGCATATGCGCCCGCGCCGTCAGCTTCTCCCAGCCGAAGAACCAGATCCCGACCAGCGTGGCTTCCag                                            <  1:3277785/95‑1 (MQ=255)


                                                           aGTTCGAGCCGATGGCGACGCCCCAGGCCACCAGCATATGCGCCCGCGCCGTCAGCTTCTCCCAGCCGAAGAACCAGATCCCGACCAGCGTGGCTTCCaga                                           >  1:3157818/1‑101 (MQ=255)


                                                            gTTCGAGCCGATGGCGACGCCCCAGGCCACCAGCATATGCGCCCGCGCCGTCAGCTTCTCCCAGCCGAAGAACCAGATCCCGACCACCGTGGCTTCCcgaa                                          >  2:568449/1‑101 (MQ=255)


                                                            cggcGAGCCAATGGCGGCGCCCCAGGCCACCAGCATATGCGCCCGCGCCGTCAGCTTCCCCCAGCCGAAGAACCAGATCCCGACCAGCGTGGCTTCCagaa                                          <  1:418491/98‑1 (MQ=255)


                                                               cGAGCCGATGGCGACGCCCCAGGCCACCAGCATATGCGCCCGCGCCGTCAGCTTCTCCCAGCCGAAGAACCAGATCCCGACCAGCGTGGCTTCCagaaaga                                       >  1:997401/1‑101 (MQ=255)


                                                                  gCCGATGGCGACGCCCCAGGCCACCAGCATATGCGCCCGCGCCGTCAGCTCCTCCCAGCCGAAGAACCAGATCCCGACCAGCGTGGCTTCCAGAAAGAACg                                    <  2:4284422/101‑1 (MQ=255)


                                                                    ngATNGCGACGCCCCAGGCCACCAGCATATGCGCCCGCGCCGTCAGCTTCTCCCAGCCGAAGAACCAGATCCCGACCAGCGTGGCTTCCAGAAAGAACGcc                                  <  1:3742074/100‑1 (MQ=255)


                                                                     gATGGCGACGCCCCAGGCCACCAGCATATGCGCCCGCGCCGTCAGCTTCTCCCAGCCGAAGAACCAGATCCCGACCAGCGTGGCTTCCAGAAAGAACGCCa                                 <  2:513348/101‑1 (MQ=255)


                                                                     gATGGCGACGCCCCAGGCCACCAGCATATGCGCCCGCGCCGTCAGCTTCTCCCAGCCGAAGAACCAGATCCCGACCAGCGTGGCTTCCAGAAAGAACGCCa                                 >  1:3855788/1‑101 (MQ=255)


                                                                       tGGCGACGCCCCAGGCCACCAGCATATGCGCCCGCGCCGTCAGCTTCTCCCAGCCGAAGAACCAGATCCCGACCAGCGTGGCTTCCAGAAAGAACGCCATc                               <  1:2938357/101‑1 (MQ=255)


                                                                          cGACGCCCCAGGCCACCAGCATATGCGCCCGCGCCGTCAGCTTCTCCCAGCCGAAGAACCAGATCCCGACCAGCGTGGCTTCCAGAAAGAACGCCATCAGc                            >  2:2583981/1‑101 (MQ=255)


                                                                          cGACGCCCCAGGCCACCAGCATATGCGCCCGCGCCGTCAGCTTCTCCCAGCCGAAGAACCAGATCCCGACCAGCGTGGCTTCCAGAAAGAACGCCATCAGc                            >  1:2983624/1‑101 (MQ=255)


                                                                           gACGCCCCAGGCCACCAGCATATGCGCCCGCGCCGTCAGCTTCTCCCAGCCGAAGAACCAGATCCCGACCAGCGTGGCTTCCAGAAAGAACGCCATCAGcc                           >  1:3641289/1‑101 (MQ=255)


                                                                            aCGCCCCAGGCCACCAGCATATGCGCCCGCGCCGTCAGCTTCTCCCAGCCGAAGAACCAGATCCCGACCAGCGTGGCTTCCAGAAAGAACGCCATCAGccc                          <  2:4379038/101‑1 (MQ=255)


                                                                                cccAGGCCACCAGCATATGCGCCCGCGCCGTCAGCTTCTCCCAGCCGAAGAACCAGATCCCGACCAGCGTGGCTTCCAGAAAGAACGCCATCAGCCCCTCg                      >  1:2453207/1‑101 (MQ=255)


                                                                                 ccAGGCCACCAGCATATGCGCCCGCGCCGTCAGCTTCTCCCAGCCGAAGAACCAGATCCCGACCAGCGTGGCTTCCAGAAAGAACGCCATCAGCCCCTCGa                     >  2:3340983/1‑101 (MQ=255)


                                                                                  cAGGCCACCAGCATATGCGCCCGCGCCGTCAGCTTCTCCCAGCCGAAGAACCAGATCCCGACCAGCGTGGCTTCCAGAAAGAACGCCATCAGCCCCTCGAt                    >  2:1191946/1‑101 (MQ=255)


                                                                                     gCCACCAGCATATGCGCCCGCGCCGTCAGCTTCTCCCAGCCGAAGAACCAGATCCCGACCAGCGTGGCTTCCAGAAAGAACGCCATCAGCCCCTCGATGGc                 >  2:3904975/1‑101 (MQ=255)


                                                                                       caccaGCATATGCGCCCGCGCCGTCAGCTTCTCCCAGCCGAAGAACCAGATCCCGACCAGCGTGGCTTCCAGAAAGAACGCCATCAGCCCCTCGATGGCGa               >  2:2965792/1‑101 (MQ=255)


                                                                                       caccaGCATATGAGCCCGCGCCGTCAGCTTCTCCCAGCCGAAGAACCAGATCCCGACCAGCGTGGCTTCCAGAAAGAACGCCAACAGCCCCTCGATGGCGa               >  2:3697323/1‑101 (MQ=255)


                                                                                        accaGCATATGCGCCCGCGCCGTCAGCTTCTCCCAGCCGAAGAACCAGATCCCGACCAGCGTGGCTTCCAGAAAGAACGCCATCAGCCCCTCGATGGCGAg              <  1:1958553/101‑1 (MQ=255)


                                                                                         ccaGCATATGCGCCCGCGCCGTCAGCTTCTCCCAGCCGAAGAACCAGATCCCGACCAGCGTGGCTTCCAGAAAGAACGCCATCAGCCCCTCGATGGCGAgc             <  1:4119376/101‑1 (MQ=255)


                                                                                          caGCATATGCGCCCGCGCCGTCAGCTTCTCCCAGCCGAAGAACCAGATCCCGACCAGCGTGGCTTCCAGAAAGAACGCCATCAGCCCCTCGATGGCGAgcg            <  1:1398272/101‑1 (MQ=255)


                                                                                           aGCATATGCGCCCGCGCCGTCAGCTTCTCCCAGCCGAAGAACCAGATCCCGACCAGCGTGGCTTCCAGAAAGAACGCCATCAGCCCCTCGATGGCGAgcgg           >  2:73590/1‑101 (MQ=255)


                                                                                            gCATATGCGCCCGCGCCGTCAGCTTCTCCCAGCCGAAGAACCAGATCCCGACCAGCGTGGCTTCCAGAAAGAACGCCATCAGCCCCTCGATGGCGAgcggc          >  1:12782/1‑101 (MQ=255)


                                                                                             cATATGCGCCCGCGCCGTCAGCTTCTCCCAGCCGAAGAACCAGATCCCGACCAGCGTGGCTTCCAGAAAGAACGCCATCAGCCCCTCGATGGCGAgcggcg         >  1:469215/1‑101 (MQ=255)


                                                                                             cATATGCGCCCGCGCCGTCAGCTTCTCCCAGCCGAAGAACCAGATCCCGACCAGCGTGGCTTCCAGAAAGAACGCCATCAGCCCCTCGATGGCGAgcggcg         <  2:1903074/101‑1 (MQ=255)


                                                                                             cATATGCGCCCGCGCCGTCAGCTTCTCCCAGCCGAAGAACCAGATCCCGACCAGCGTGGCTTCCAGAAAGAACGCCATCAGCCCCTCGATGGCGAgcggcg         >  2:4684195/1‑101 (MQ=255)


                                                                                             cATATGCGCCCGCGCCGTCAGCTTCTCCCAGCCGAAGAACCAGATCCCGACCAGCGTGGCTTCCAGAAAGAACGCCATCAGCCCCTCGATGGCGAgcggcg         >  2:3026525/1‑101 (MQ=255)


                                                                                              atatGCGCCCGCGCCGTCAGCTTCTCCCAGCCGAAGAACCAGATCCCGACCAGCGTGGCTTCCAGAAAGAACGCCATCAGCCCCTCGATGGCGAGCGgcgc        >  1:543996/1‑101 (MQ=255)


                                                                                              atatGCGCCCGCGCCGTCAGCTTCTCCCAGCCGAAGAACCAGATCCCGACCAGCGTGGCTTCCAGAAAGAACGCCATCAGCCCCTCGATGGCGAGCGgcgc        >  2:45499/1‑101 (MQ=255)


                                                                                               tatGCGCCCGCGCCGTCAGCTTCTCCCAGCCGAAGAACCAGATCCCGACCAGCGTGGCTTCCAGAAAGAACGCCATCAGCCCCTCGATGGCGAGCGGCGcc       >  2:800456/1‑101 (MQ=255)


                                                                                               tatGCGCCCGCGCCGTCAGCTTCTCCCAGCCGAAGAACCAGATCCCGACCAGCGTGGATTCCAGAAAGAACGCCATCAGCCCCTCGATGGCGAGCGGCGcc       >  1:44103/1‑101 (MQ=255)


                                                                                                 tGCGCCCGCGCCGTCAGCTTCTCCCAGCCGAAGAACCAGATCCCGACCAGCGTGGCTTCCAGAAAGAACGCCATCAGCCCCTCGATGGCGAGCGGCGcccc     <  1:2072248/101‑1 (MQ=255)


                                                                                                  gcgcCCGCGCCGTCAGCTTCTCCCAGCCGAAGAACCAGATCCCGACCAGCGTGGCTTCCAGAAAGAACGCCATCAGCCCCTCGATGGCGAGCGGCGCCCCg    <  1:1036062/101‑1 (MQ=255)


                                                                                                   cgcCCGCGCCGTCAGCTTCTCCCAGCCGAAGAACCAGATCCCGACCAGCGTGGCTTCCAGAAAGAACGCCATCAGCCCCTCGATGGCGAGCGGCGCCCCGa   <  1:4959457/101‑1 (MQ=255)


CGGCGCCGACCGGG.TTCTGCATCCAGCCATTCGCGATCAGGATCCACAAGGCCGAG.AAGTTCGAGCCGATGGCGACGCCCCAGGCCACCAGCATATGCGCCCGCGCCGTCAGCTTCTCCCAGCCGAAGAACCAGATCCCGACCAGCGTGGCTTCCAGAAAGAACGCCATCAGCCCCTCGATGGCGAGCGGCGCCCCGAA  >  NC_014034/3278888‑3279086

Base quality scores:


ATCG

< 3 ≤


ATCG

< 24 ≤


ATCG

< 31 ≤


ATCG

< 35 ≤


ATCG

< 41 ≤


ATCG