BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	408498 =	27 (0.160)	68 (0.400)	23/140	11.8	0.49	intergenic (+116/+32)	glnA1/dapA	glutamine synthetase/dihydrodipicolinate synthase
*	?	NC_014034	= 1639998	114 (0.470)	68 (0.400)	23/140	11.8	0.49	intergenic (+78/‑67)	mccB/mccA	methylcrotonoyl‑CoA carboxylase subunit beta/methylcrotonoyl‑CoA carboxylase subunit alpha
Rejected: Position hash score below cutoff.

Only 100 of 166 total aligned reads displayed.


GCTTCGGGATCTTCCGGATGTGACTTTCGATGCCTCCGGCGGGGATATTTGGGGCAAGATG.AAACCCATCCC.TTT.C.A.TC.TTG.CCCCAAAT.A.T.CCCGGGGGGCCCGG..G....G....G.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCC  >  NC_014034/1639898‑1640088


gCTTCGGGATCTTCCGGATGTGACTTTCGATGCCTCCGGCGGGGGTAATTTTGGCAAGAAG.CAACCCATCCC.TTT.T.C.TC.TTT.CCCCCAAT.A.T.TCCgggtgg                                                                                                              >  2:2971582/1‑101 (MQ=255)


  ttCGGGATCTTCCGGATGTGACTTTCGATGCCTCCGGCGGGGGGATTTTGGGCAAGATG.AAAACCCTCCC.CTT.C.C.TC.TTGCCCCCAAAA.T.T.CCCCGGGGGc                                                                                                             >  2:3850394/1‑101 (MQ=25)


   tCGGGATCTTCCGGATGTGACTTTCGATGCCTCCGGCGGGGGTATTTTGGGGAAGATG.AAACCCATCCC.CTT.C.A.TC.TTT.CCCCCAAT.A.T.CCCGGGGGGgcc                                                                                                           >  2:4303312/1‑101 (MQ=37)


   tCGGGATCTTCCGGATGTGACTTTCGATGCCTCCGGCGGGGGTATTTGGGGGAAGATG.AAAACCATCCC.CTT.C.C.TC.TTT.CCCCCAAT.ATT.CCCGGGGGGcc                                                                                                            >  2:141099/1‑101 (MQ=37)


   tCGGGATCTTCCGGATGTGACTTTCGATGCCTCCGGCGGGGATATTTGGGGCAAGATG.AAACCCATCCC.TTT.C.A.TC.TTG.CCCCAAAT.A.T.CCCGGGGGGccc                                                                                                           <  2:4637424/101‑1 (MQ=255)


    cGGGATCTTCCGGATGTGACTTTCGATGCCTCCGGCGGGGGTATTTTGGGGAAGATG.AAAACCAACCC.TTT.T.A.TC.TTT.CCCCAAAA.A.A.CCCCGGGGGGCCg                                                                                                          >  1:2061692/1‑101 (MQ=25)


    cGGGATCTTCCGGATGTGACTTTCGATGCCTCCGGCGGGGGGATTTTGGGGAAGAAG.AAACCCACCCC.CTT.T.C.TC.TTT.CCCCCAATAA.C.CCCGGGGGGccc                                                                                                           >  1:339829/1‑101 (MQ=255)


    cGGGATCTTCCGGATGTGACTTTCGATGCCTCCGGCGGGGATATTTGGGGCAAGATG.AAACCCATCCC.TTT.C.A.TC.TTG.CCCCAAAT.A.T.CCCGGGGGGCCCg                                                                                                          <  1:4454198/101‑1 (MQ=255)


     gggATCTTCCGGATGTGACTTTCGATGCCTCCGGCGGGGGTATTTTGGGGCAGATG.AAAACCATCCC.CTT.C.A.TC.TTT.CCCCCAAA.A.TCCCCGGGGGGCCCg                                                                                                          >  2:3759959/1‑101 (MQ=255)


     gggATCTTCCGGATGTGACTTTCGATGCCTCCGGCGGGGGGATTTGGGGGAAGATG.AAACCCCTCCC.CTT.C.A.TC.CTG.CCCCCAAA.A.T.TCCCCGGGGccccg                                                                                                         >  1:545885/1‑99 (MQ=255)


     gggATCTTCCGGATGTGACTTTCGATGCCTCCGGCGGGGGAATTTTGGGGAAGAAG.AAAACCATCCC.TTT.C.A.TC.TTT.CCCCAAAT.A.T.CCCGGGGGGGCCgg                                                                                                         >  1:3925449/1‑101 (MQ=37)


     gggATCTTCCGGATGTGACTTTCGATGCCTCCGGCGGGGATATTTGGGGCAAGATG.AAACCCATCCC.TTT.C.A.TC.TTG.CCCCAAAT.A.C.CCCGGGGGGCCCgg                                                                                                         <  1:905529/101‑1 (MQ=255)


      ggATCTTCCGGATGTGACTTTCGATGCCTCCGGCGGGGGGATTTTGGGCAAGATG.AAACCCATCCC.TTT.C.A.TC.TTT.CCCCAAAT.A.T.ACCGGGGGGGCCgg..g                                                                                                      >  2:2633787/1‑101 (MQ=37)


      ggATCTTCCGGATGTGACTTTCGATGCCTCCGGCGGGGGGATTTGGGGGGAGATG.AAAACCAACCC.TTT.C.A.TCTTTT.CCCCAAAA.T.C.CCCGGGGGGCCCgg                                                                                                         >  1:2002756/1‑101 (MQ=255)


       gATCTTCCGGATGTGACTTTCGATGCCTCCGGCGGGGGGATTTTGGGGAAGATG.AAAACCATCCC.TTT.C.A.TC.TTT.CCCCAAAT.A.T.CCCGCGGGGCCCcg..g....g                                                                                                 >  1:145640/1‑101 (MQ=37)


       gATCTTCCGGATGTGACTTTCGATGCCTCCGGCGGAGAGATTTGAGGCGAAATG.AAACCCATCCC.CTT.C.A.TT.TTG.CCCCACAT.A.A.ACCAGGGGGCCCgc..g....g                                                                                                 >  1:1568094/1‑101 (MQ=255)


        tttttCCGGATGTGTCTTTCGATGCCTCCGGCGGGGATTTTTGGGGCAAGATA.AACCCCACCCT.TTT.C.A.TC.TTG.CCCCAAAT.A.T.CCCGGGGGGCCCgg..g....g....g                                                                                            <  2:1067666/98‑1 (MQ=25)


        aTCTTCCGGATGTGACTTTCGATGCCTCCGGCGGGGGGATTTTTGGGCAGATGAAAAACCACCCC.TTT.C.T.CT.TTT.CCCCAAAA.A.T.CCCCGGGGGCCGgg..g....g                                                                                                 >  2:1832357/1‑101 (MQ=255)


        aTCTTCCGGATGTGACTTTCGATGCCTCCGGCGGGGATATTTGGGGCAAGATG.AAACCCATCCC.TTT.C.A.TC.TTG.CCCCAAAT.A.T.CCCGGGGGGCCCgg..g....g....g                                                                                            <  1:610061/101‑1 (MQ=255)


          cTTCCGGATGTGACTTTCGATGCCTCCGGCGGGGATATTTGGGGCAAGATG.AAACCCATCCC.TTT.C.A.TC.TTG.CCCCAAAT.A.T.CCCGGGGGGCCCgg..g....g....ggc                                                                                          <  1:2665870/101‑3 (MQ=255)


          cTTCCGGATGTGACTTTCGATGCCTCCGGCGGGGATATTTGGGGCAAGATG.AAACCCATCCC.TTT.C.A.TC.TTG.CCCCAAAT.A.T.CCCGGGGGGCCCgg..g....g....ggc                                                                                          <  2:813411/101‑3 (MQ=255)


           ttCCGGATGTGACTTTCGATGCCTCCGGCGGGGGGATTTGGGGGAAGAAG.AAACCCATCCC.TTT.T.A.TC.TTT.CCCCCAAA.A.TCCCCGGGGGGCCCgg..g....g....ggg                                                                                          >  1:1436575/1‑99 (MQ=25)


            tCCGGATGTGACTTTCGATGCCTCCGGCGGGGATATTTGGGGCAAGATG.AAACCCATCCC.TTT.C.A.TC.TTG.CCCCAAAT.A.T.CCCGGGGGGCCCgg..g....g....ggcag                                                                                        <  1:659115/101‑5 (MQ=255)


            tCCGGATGTGACTTTCGATGCCTCCGGCGGGGATATTTGGGGCAAGATG.AAACCCATCCC.TTT.C.A.TC.TTG.CCCCAAAT.A.T.CCCGGGGGGCCCgg..g....g....ggcag                                                                                        <  2:4627126/101‑5 (MQ=255)


            tCCGGATGTGACTTTCGATGCCTCCGGCGGGGATATTTGGGGCAAGATG.AAACCCATCCC.TTT.C.A.TC.TTG.CCCCAAAT.A.T.CCCGGGGGGCCCgg..g....g....ggcag                                                                                        <  2:3817440/101‑5 (MQ=255)


             ccGGATGTGACTTTCGATGCCTCCGGCGGGGGGATTTGGGGGAAGATG.AAAAACATCCC.CTT.C.ATTT.TTC.CCCCAAAA.A.C.CCCCGGGGCCCCGC..G....G....g.....gg...cg                                                                                >  2:117226/1‑100 (MQ=255)


              cGGATGTGACTTTCGATGCCTCCGGCGGGGGGATTTTGGGGAAGATG.AAAACCCTCCC.CTT.CTT.TT.TTT.CCCCAAAA.T.C.CCCGGGGGGCCCgg..g....g....gggggg                                                                                       >  1:3491725/1‑96 (MQ=255)


                gATGTGACTTTCGATGCCTCCGGCGGGGGAATTTGGGGGGAGAAA.AAAACCATCCC.TTT.C.T.TC.TTC.TCCCCAAT.A.T.CCCGCGGGGCCCgg..g....g....gggggcgcc                                                                                    >  1:1558786/1‑93 (MQ=255)


                 aTGTGACTTTCGATGCCTCCGGCGGGGATATTTGGGGCAAGATG.AAACCCATCCC.TTT.C.A.TC.TTG.CCCCAAAT.A.T.CCCGGGGGGCCCgg..g....g....ggcagcgccc                                                                                   <  1:1109276/101‑10 (MQ=255)


                  tgtgACTTTCGATGCCTCCGGCGGGGATATTTTGGGGAAGATG.AAAACCATCCC.TTT.C.A.TC.TTT.CCCCAAAA.A.T.CCCGGGGGGGCCgg..g....g....gggagcgcccc                                                                                  >  2:4057149/1‑91 (MQ=21)


                  tgtgACTTTCGATGCCTCCGGCGGGGATATTTTGGGCAAGATG.AAACCCATCCC.TTT.C.A.TC.TTG.CCCCCAAT.A.T.CCCCGGGGGCCCGG..G....G....g.....gg...cgcggccc                                                                          >  2:3708948/1‑94 (MQ=25)


                     gACTTTCGATGCCTCCGGCGGGGGTATTTGGGGCAAGATG.AAACCCCTCCC.TTT.C.C.TC.TTT.CCCCAAAT.A.T.CCCCGGGGGCCCGG..G....G....g.....gg...cgcgccccccc                                                                       >  2:1991081/1‑91 (MQ=25)


                                 cTCCGGCGGGGGTATTTGGGGCAAGATG.AAACCCATCCC.TTT.T.A.TC.TTG.CCCCAAAT.A.T.CCCGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCCCCCCTTCCGccc                                                               >  2:1497780/1‑100 (MQ=18)


                                      gcggGGATATTTGGGGCAAGATG.AAACCCATCCC.TTT.C.A.TC.TTG.CCCCAAAT.A.T.CCCGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGCCACgggg                                                          >  1:5034818/1‑101 (MQ=21)


                                       gggggATTTTGGGGCCAAAAAC.AACCCCATCCC.TTT.C.A.TT.TTC.CCCAAAAT.C.C.CCGGGGGGGCCGGG..G....GGGCAG.....CC...CCCCCCGCCACTTCCGCCACGGGGc                                                         <  1:1590094/100‑1 (MQ=255)


                                       cggGGACATTTGGGGCAAGATG.AAACCCATCCC.TTT.C.A.TC.TTG.CCCCAAAT.A.T.CCCGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGCCCCGGGGc                                                         >  2:700724/1‑101 (MQ=21)


                                        ggggATATTTGGGGCAAGATG.AAACCCATCCC.TTT.C.A.TC.TTG.CCCCAAAT.A.T.CCCGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGCCACGGGGCa                                                        >  2:2004887/1‑101 (MQ=25)


                                         gggATATTTGGGGCAAGATG.AAACCCATCCC.TTT.C.A.TC.TTG.CCCCAAAT.A.T.CCCGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGCCACGGGGCAg                                                       >  1:3731726/1‑101 (MQ=25)


                                          ggATATTTGGGGCAAGATG.AAACCCATCCC.TTT.C.A.TC.TTG.CCCCAAAT.A.T.CCCGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGCCACGGGGCAgc                                                      >  2:34875/1‑101 (MQ=25)


                                          ggATATTTGGGGCAAGATG.AAACCCATCCC.TTT.C.A.TC.TTG.CCCCAAAT.A.T.CCCGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGCCACGGGGCAgc                                                      >  2:4532976/1‑101 (MQ=21)


                                           gATATTTGGGGCAAGATG.AAACCCATCCC.TTT.C.A.TC.TTG.CCCCAAAT.A.T.CCCGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGCCACGGGGCAgcg                                                     >  1:923428/1‑101 (MQ=25)


                                           gATATTTGGGGCAAGATG.AAACCCATCCC.TTT.C.A.TC.TTG.CCCCAAAT.A.T.CCCGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGCCACGGGGCAgcg                                                     >  1:1918658/1‑101 (MQ=25)


                                            atatTTGGGGCAAGATG.AAACCCATCCC.TTT.C.A.TC.TTG.CCCCAAAT.A.T.CCCGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGCCACGGGGCAgcgc                                                    >  2:879019/1‑101 (MQ=21)


                                              atTTGGGGCAAGATG.AAACCCATCCC.TTT.C.A.TC.TTG.CCCCAAAT.A.T.CCCGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGccc                                                  >  1:3844587/1‑101 (MQ=25)


                                              atTTGGGGCAAGATG.AAACCCATCCC.TTT.C.A.TC.TTG.CCCCAAAT.A.T.CCCGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGccc                                                  >  2:3315722/1‑101 (MQ=25)


                                               ttggggaCAAGATA.ACCCCCATCCT.TTT.C.T.TC.TCG.CCCAAAAT.A.C.CCGGGGGCGCCGGG..GGGGCG....G.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGcccc                                                 <  2:3395228/98‑1 (MQ=255)


                                                ttGGGGCAAGATG.AAACCCATCCC.TTT.C.A.TC.TTG.CCCCAAAT.A.T.CCCGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCg                                                >  2:562803/1‑101 (MQ=21)


                                                ttGGGGCAAGATA.AAACCCATCCC.TTT.C.A.TC.TTG.CCCCAAAT.A.T.CCCGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCg                                                >  1:2743243/1‑101 (MQ=21)


                                                 tGGGGCAAGATG.AAACCCATCCC.TTT.C.A.TC.TTG.CCCCAAAT.A.T.CCCGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCgg                                               >  2:2402813/1‑101 (MQ=25)


                                                  ggggCAAGATG.AAACCCATCCC.TTT.C.A.TC.TTG.CCCCAAAT.A.T.CCCGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGc                                              >  2:1244857/1‑101 (MQ=25)


                                                  ggggCAAGATA.AACCCCATCCC.TTT.C.C.TC.TCC.CCCAAAAT.C.T.CCGGGGGGGCCGGG..G....G....GGC...CGCC.CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGc                                              <  2:651835/101‑1 (MQ=255)


                                                   gggCAAGATG.AAACCCATCCC.TTT.C.A.TC.TTG.CCCCAAAT.A.T.CCCGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGcc                                             >  1:4829713/1‑101 (MQ=25)


                                                      cAAGATG.ACCCCCCCCCT.TTC.C.A.TT.TTC.CCCAAAAT.A.C.CCGGGGGGGCCGGG..G....G....GGCAC.CC...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGtt                                          <  2:2438211/101‑1 (MQ=255)


                                                      cAAGATG.AAACCCATCCC.TTT.C.A.TC.TTG.CCCCAAAT.A.T.CCCGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGtt                                          >  2:328209/1‑101 (MQ=25)


                                                      cAAGATG.AAACCCATCCC.TTT.C.A.TC.TTG.CCCCAAAT.A.T.CCCGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGtt                                          >  1:3071358/1‑101 (MQ=25)


                                                      cAAGATG.AAACCCATCCA.TTT.C.A.TC.TTG.CCCCAAAT.A.T.ACCGGGGGGCCCGGTAG....GAA..G.....CG...CCCTCCGCCACTTCCGCCACACGGCAGCGCCCCGGccccg                                          >  2:1867362/1‑98 (MQ=19)


                                                       gaaaaaaaaaCCCCTCCC.TTT.C.C.TC.TTG.CCCCAAAA.G.C.GCGGGGGGGCCCGG..G....G....GGCCCCCC...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGt                                           <  1:1392614/94‑1 (MQ=255)


                                                       aaGATG.AAACCCATCCC.TTT.C.A.TC.TTG.CCCCAAAT.A.T.CCCGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTg                                         >  1:2719933/1‑101 (MQ=25)


                                                        aGATG.AAACCCATCCC.TTT.C.A.TC.TTG.CCCCAAAT.A.T.CCCGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGa                                        >  2:3506602/1‑101 (MQ=25)


                                                        aGATG.AAACCCATCCC.TTT.C.A.TC.TTG.CCCCAAAT.A.T.CCCGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGa                                        >  1:3283417/1‑101 (MQ=21)


                                                        aGATG.AAACCCATCCC.TTT.C.A.TC.TTG.CCCCAAAT.A.T.CCCGGGGGCCCCGG..G....GGGCAG.....CC...CCCCCCGCCCCTTCCGCCACGGGCCAGCGCCCCGGCGGtcgc                                        >  1:1275983/1‑98 (MQ=18)


                                                          aTG.AAACCCATCCC.TTT.C.A.TC.TTG.CCCCAAAT.A.T.CCCGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACg                                      >  2:2295140/1‑101 (MQ=21)


                                                            g.AAACCCATCCC.TTT.C.A.TC.TTG.CCCCAAAT.A.T.CCCGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACgca                                    >  2:3780852/1‑99 (MQ=21)


                                                            g.AAACCCATCCC.TTT.C.A.TC.TTG.CCCCAAAT.A.T.CCCGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGaa                                    >  2:3328186/1‑101 (MQ=25)


                                                            g.AAACCCATCCC.TTT.C.A.TC.TTG.CCCCAAAT.A.T.CCCGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGaa                                    >  1:2726290/1‑101 (MQ=25)


                                                            g.AAACCCATCCC.TTT.C.A.TC.TTG.CCCCAAAT.A.T.CCCGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGaa                                    >  1:774800/1‑101 (MQ=25)


                                                             aaaaCCCCTCCCTTTT.C.C.TC.TTC.CCCAAAAT.C.C.CCGGGGGGGCCGGG..G....G....GC....CGCCCCCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGa                                     <  2:1938192/100‑1 (MQ=255)


                                                              aaaCCAATCCC.TTT.C.A.TC.TTG.CCCCAAAT.A.T.CCCGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGACACGGGGCAGCGCCCCGGCCGTTGACGAAg                                   >  1:324899/1‑101 (MQ=21)


                                                               aaCCCATCCC.TTT.C.A.TA.TTG.CCCCAAAT.A.T.CCCGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAgg                                  >  2:2803272/1‑101 (MQ=25)


                                                                   cccccc.TTTCC.A.TC.TCC.CCCAAAAT.A.C.CCGGGGGGGCCGGG..G....G....GGCCC.CC...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGgaga                               <  2:1436448/98‑1 (MQ=255)


                                                                   cATCCC.TTT.C.A.TC.TTG.CCCCAAAT.A.T.CCCGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGAc                              >  2:4295738/1‑101 (MQ=25)


                                                                     tCCC.TTT.C.A.TC.TTG.CCCCAAAT.A.T.CCCGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACcg                            >  2:526029/1‑101 (MQ=25)


                                                                      ccc.TTT.C.A.TC.TTG.CCCCAAAT.A.T.CCCGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACcgc                           >  2:3767347/1‑101 (MQ=25)


                                                                      ccc.TTT.C.A.TC.TTG.CCCCAAAT.A.T.CCCGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGCTGACGAAGGAGACcgc                           >  2:27481/1‑101 (MQ=21)


                                                                       cc.TTT.C.A.TC.TTG.CCCCAAAT.A.T.CCCGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACcgcg                          >  1:262078/1‑101 (MQ=25)


                                                                          ttt.C.A.TC.TTG.CCCCAAAT.A.T.CCCGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGAt                        >  1:2304764/1‑101 (MQ=25)


                                                                           tt.C.A.TC.TTG.CCCCAAAT.A.T.CCCGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATg                       >  1:5050196/1‑101 (MQ=25)


                                                                           tt.C.A.TC.TTG.CCCCAAAT.A.T.CCCGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATg                       >  1:4605961/1‑101 (MQ=25)


                                                                            t.C.A.TC.TTG.CCCCAAAT.A.T.CCCGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGt                      >  1:4055126/1‑101 (MQ=25)


                                                                              c.A.TC.TTG.CCCCAAAT.A.T.CCCGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGtt                     >  1:2158369/1‑101 (MQ=25)


                                                                                a.TC.TTG.CCCCAAAT.A.T.CCCGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGttt                    >  1:4745977/1‑101 (MQ=25)


                                                                                   c.TTG.CCCCAAAT.A.T.CCCGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGCCCGCGATGTTTCa                  >  1:3713336/1‑101 (MQ=25)


                                                                                     ttG.CCCCAAAT.A.T.CCCGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCaa                 >  1:395581/1‑101 (MQ=25)


                                                                                     ttG.CCCCAAAT.A.T.CCCGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCaa                 >  2:2609102/1‑101 (MQ=25)


                                                                                     ttG.CCCCAAAT.A.T.CCCGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCaa                 >  2:2202895/1‑101 (MQ=25)


                                                                                       g.CCCCAAAT.A.T.CCCGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCaaaa               >  2:1133990/1‑101 (MQ=25)


                                                                                       g.CCCCAAAT.A.T.CCCGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCaaaa               >  1:2966012/1‑101 (MQ=25)


                                                                                         ccccAAAT.A.T.CCCGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGCCCCGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAg              >  1:921750/1‑101 (MQ=25)


                                                                                            cAAAT.A.T.CCCGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATc           >  1:3177635/1‑101 (MQ=25)


                                                                                            cAAAT.A.T.CCCGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATc           >  1:3639681/1‑101 (MQ=25)


                                                                                            cAAAT.A.T.CCCGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATc           >  1:4346828/1‑101 (MQ=25)


                                                                                             aaaT.A.T.CCCGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATct          >  1:494676/1‑100 (MQ=25)


                                                                                              aaT.A.T.CCCGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCt         >  1:1001191/1‑101 (MQ=25)


                                                                                               at.a.t.CCCGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTg        >  1:3496126/1‑101 (MQ=37)


                                                                                               at.a.t.CCCGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTg        >  1:2696537/1‑101 (MQ=37)


                                                                                               at.a.t.CCCGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGAAGACCGCGATGTTTCAAAAGATCCTg        >  2:4831687/1‑101 (MQ=25)


                                                                                                    t.CCCGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATc     >  1:1326618/1‑101 (MQ=37)


                                                                                                      cccGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCg    >  1:61646/1‑101 (MQ=37)


                                                                                                        cGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGcc  >  1:2385509/1‑101 (MQ=37)


                                                                                                        cGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGcc  >  1:1394266/1‑101 (MQ=37)


GCTTCGGGATCTTCCGGATGTGACTTTCGATGCCTCCGGCGGGGATATTTGGGGCAAGATG.AAACCCATCCC.TTT.C.A.TC.TTG.CCCCAAAT.A.T.CCCGGGGGGCCCGG..G....G....G.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCC  >  NC_014034/1639898‑1640088

Base quality scores:


ATCG

< 3 ≤


ATCG

< 18 ≤


ATCG

< 26 ≤


ATCG

< 33 ≤


ATCG

< 41 ≤


ATCG