BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	= 440018	175 (0.790)	58 (0.260)	6/182	24.7	0.30	intergenic (+53/+3)	RCAP_rcc00411/RCAP_rcc00412	S58 family peptidase/arylformamidase
*	?	NC_014034	1640015 =	94 (0.380)	58 (0.260)	6/182	24.7	0.30	intergenic (+95/‑50)	mccB/mccA	methylcrotonoyl‑CoA carboxylase subunit beta/methylcrotonoyl‑CoA carboxylase subunit alpha
Rejected: Position hash score below cutoff.

Only 100 of 144 total aligned reads displayed.


ATGCCTCCGGCGGGGATATTTGGGGCAAGATGAAACCCATCCC.TTT.CATCTTGCCCCAAATATCCCGGGGGGCCCGG..G....G....G.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATCGCCTGTCGGGTG  >  NC_014034/1639927‑1640115


gtccccacgccggGGATATTGTGGAAAAGAAGAAACAGATCCC.TTT.ATTAATGCCCCAATTGTCCGGGGGGGCCCGG..G....G....GGCCT.CC...CCCCCCGCCACTTcc                                                                                              <  2:1567964/91‑1 (MQ=255)


     tCCGGCGGGGATATTTTGGGCAAGATGAAACCCCTCCC.TTT.TATCTTGCCCCCAATATCCCGGGGGGCCCGG..G....GGGGAG.....CG...CCCCCCCCCACTTCCCcccc                                                                                         >  2:3979492/1‑99 (MQ=16)


         ggggggATTTTTGGGGAAAAAATAAACCCCTCCC.TTT.TCTTTTGCCCCAAATTTCCCGGGGGGGCCGG..G....G....GGC...CGCCCCCCCCCGCCACTTCCGCCACggg                                                                                      <  1:4455401/99‑1 (MQ=255)


         gcggGGATATTTGGGGCAAGATGAAACCCATCCC.TTT.CATCTTGCCCCAAATATCCCGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGCCACgggg                                                                                     >  1:5034818/1‑101 (MQ=21)


           ggggATATTTGGGGCAAGATGAAACCCATCCC.TTT.CATCTTGCCCCAAATATCCCGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGCCACGGGGCa                                                                                   >  2:2004887/1‑101 (MQ=25)


            gggATATTTGGGGCAAGATGAAACCCATCCC.TTT.CATCTTGCCCCAAATATCCCGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGCCACGGGGCAg                                                                                  >  1:3207545/1‑101 (MQ=21)


             ggATATTTGGGGCAAGATGAAACCCATCCC.TTT.CATCTTGCCCCAAATATCCCGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGCCACGGGGCAgc                                                                                 >  2:34875/1‑101 (MQ=25)


             ggATATTTGGGGCAAGATGAAACCCATCCC.TTT.CATCTTGCCCCAAATATCCCGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGCCACGGGGCAgc                                                                                 >  1:1455477/1‑101 (MQ=25)


             ggATATTGGGGACAAGATGACCCCCTCCCC.TTT.CATCTGCCCCCAAATAGCCGGGGGGGCGGGG..GGGGCG....G.....CG...CCCCCCGCCACTTCCGCCACGGGGCAgc                                                                                 <  2:2453547/101‑1 (MQ=255)


              gATATTTGGGGCAAGATGAAACCCATCCC.TTT.CATCTTGCCCCAAATATCCCGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGCCACGGGGCAgcg                                                                                >  1:923428/1‑101 (MQ=25)


              gATATTTGGGGCAAGATGAAACCCATCCC.TTT.CATCTTGCCCCAAATATCCCGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGCCACGGGGCAgcg                                                                                >  1:1918658/1‑101 (MQ=25)


               atatTTGGGGCAAGATGAAACCCATCCC.TTT.CATCTTGCCCCAAATATCCCGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGCCACGGGGCAgcgc                                                                               >  2:879019/1‑101 (MQ=21)


                 atTTGGGGCAAGATGAAACCCATCCC.TTT.CATCTTGCCCCAAATATCCCGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGccc                                                                             >  2:3315722/1‑101 (MQ=25)


                 atTTGGGGCAAGATGAAACCCATCCC.TTT.CATCTTGCCCCAAATATCCCGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGccc                                                                             >  1:3844587/1‑101 (MQ=25)


                  ttggggaCAAGATAACCCCCATCCT.TTT.CTTCTCGCCCAAAATACCCGGGGGCGCCGGG..GGGGCG....G.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGcccc                                                                            <  2:3395228/98‑1 (MQ=255)


                   ttGGGGCAAGATGAAACCCATCCC.TTT.CATCTTGCCCCAAATATCCCGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCg                                                                           >  2:562803/1‑101 (MQ=21)


                   ttGGGGCAAGATAAAACCCATCCC.TTT.CATCTTGCCCCAAATATCCCGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCg                                                                           >  1:2743243/1‑101 (MQ=21)


                    tGGGGCAAGATGAAACCCATCCC.TTT.CATCTTGCCCCAAATATCCCGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCgg                                                                          >  2:2402813/1‑101 (MQ=25)


                    tGGGGCAAGATGAAACCCATCCC.TTT.CATCTTGCCCCAAATATCCCGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCgg                                                                          >  2:1029225/1‑101 (MQ=25)


                    tGGGGCAAGATGAAACCCATCCC.TTT.CATCTTGCCCCAAATATCCCGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCgg                                                                          >  2:3809955/1‑101 (MQ=25)


                     ggggCAAGATGAAACCCATCCC.TTT.CATCTTGCCCCAAATATCCCGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGc                                                                         >  2:1244857/1‑101 (MQ=25)


                     ggggCAAGATAAACCCCATCCC.TTT.CCTCTCCCCCAAAATCTCCGGGGGGGCCGGG..G....G....GGC...CGCC.CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGc                                                                         <  2:651835/101‑1 (MQ=255)


                      gggCAAGATGAAACCCATCCC.TTT.CATCTTGCCCCAAATATCCCGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGcc                                                                        >  1:4829713/1‑101 (MQ=25)


                         gaaaaaaaaaCCCCTCCC.TTT.CCTCTTGCCCCAAAAGCGCGGGGGGGCCCGG..G....G....GGCCCCCC...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGt                                                                      <  1:1392614/94‑1 (MQ=255)


                         cAAGATGAAACCCATCCC.TTT.CATCTTGCCCCAAATATCCCGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGtt                                                                     >  2:328209/1‑101 (MQ=25)


                         cAAGATGAAACCCATCCC.TTT.CATCTTGCCCCAAATATCCCGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGtt                                                                     >  1:754348/1‑101 (MQ=21)


                         cAAGATGAAACCCATCCC.TTT.CATCTTGCCCCAAATATCCCGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGtt                                                                     >  1:3071358/1‑101 (MQ=25)


                         cAAGATGAAACCCATCCA.TTT.CATCTTGCCCCAAATATACCGGGGGGCCCGGTAG....GAA..G.....CG...CCCTCCGCCACTTCCGCCACACGGCAGCGCCCCGGccccg                                                                     >  2:1867362/1‑98 (MQ=19)


                          aaGATGAAACCCATCCC.TTT.CATCTTGCCCCAAATATCCCGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTg                                                                    >  1:2719933/1‑101 (MQ=25)


                           aGATGAAACCCATCCC.TTT.CATCTTGCCCCAAATATCCCGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCTCCACGGGGCAGCGCCCCGGCCGTTgc                                                                   >  2:3086703/1‑100 (MQ=21)


                           aGATGAAACCCATCCC.TTT.CATCTTGCCCCAAATATCCCGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGa                                                                   >  2:1940625/1‑101 (MQ=25)


                           aGATGAAACCCATCCC.TTT.CATCTTGCCCCAAATATCCCGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGa                                                                   >  2:3506602/1‑101 (MQ=25)


                             aTGAAACCCATCCC.TTT.CATCTTGCCCCAAATATCCCGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACg                                                                 >  2:2295140/1‑101 (MQ=21)


                              tGAAACCCATCCC.TTT.CATCTTGCCCCAAATATCCCGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGa                                                                >  2:3314490/1‑101 (MQ=25)


                               gAAACCCATCCC.TTT.CATCTTGCCCCAAATATCCCGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGaa                                                               >  1:2726290/1‑101 (MQ=25)


                               gAAACCCATCCC.TTT.CATCTTGCCCCAAATATCCCGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGaa                                                               >  1:4830120/1‑101 (MQ=25)


                               gAAACCCATCCC.TTT.CATCTTGCCCCAAATATCCCGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGaa                                                               >  1:774800/1‑101 (MQ=25)


                               gAAACCCATCCC.TTT.CATCTTGCCCCAAATATCCCGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGaa                                                               >  1:1556058/1‑101 (MQ=25)


                               aaaaCCCCTCCCTTTT.CCTCTTCCCCAAAATCCCCGGGGGGGCCGGG..G....G....GC....CGCCCCCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGa                                                                <  2:1938192/100‑1 (MQ=255)


                                aaaCCCATCCC.TTT.CATCTTGCCCCAAATATCCCGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAg                                                              >  2:3742600/1‑101 (MQ=25)


                                aaaCCCATCCC.TTT.CATCTTGCCCCAAATATCCCGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAg                                                              >  1:3963705/1‑101 (MQ=25)


                                aaaCCAATCCC.TTT.CATCTTGCCCCAAATATCCCGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGACACGGGGCAGCGCCCCGGCCGTTGACGAAg                                                              >  1:324899/1‑101 (MQ=21)


                                 aaCCCATCCC.TTT.CATCTTGCCCCAAATATCCCGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAgg                                                             >  2:3342295/1‑101 (MQ=25)


                                 aaCCCATCCC.TTT.CATATTGCCCCAAATATCCCGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAgg                                                             >  2:2803272/1‑101 (MQ=25)


                                  acccccccc.TTT.TCTCTTTCCCCAAAATTCCCGGGGGGGCGGG..G....G....GGC...CGGCCCCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAgg                                                             <  2:240497/95‑1 (MQ=255)


                                     cccccc.TTTCCATCTCCCCCAAAATACCCGGGGGGGCCGGG..G....G....GGCCC.CC...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGgaga                                                          <  2:1436448/98‑1 (MQ=255)


                                     cccccc.TTT.CATCTCG.CCCAAAAGCCCCGGGGGGCCCGG..G....G....GGGCCCCC...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGAc                                                         <  1:1580261/98‑1 (MQ=255)


                                     cATCCC.TTT.CATCTTGCCCCAAATATCCCGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGAc                                                         >  2:4295738/1‑101 (MQ=25)


                                     cATCCC.TTT.CATCTTGCCCCAAATATCCCGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGAc                                                         >  2:4534235/1‑101 (MQ=25)


                                       tCCC.TTT.CATCTTGCCCCAAATATCCCGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACcg                                                       >  2:824212/1‑101 (MQ=25)


                                       tCCC.TTT.CATCTTGCCCCAAATATCCCGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACcg                                                       >  2:526029/1‑101 (MQ=25)


                                        ccc.TTT.CATCTTGCCCCAAATATCCCGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACcgc                                                      >  2:3767347/1‑101 (MQ=25)


                                        ccc.TTT.CATCTTGCCCCAAATATCCCGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGCTGACGAAGGAGACcgc                                                      >  2:27481/1‑101 (MQ=21)


                                         cc.TTT.CATCTTGCCCCAAATATCCCGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACcgcg                                                     >  1:262078/1‑101 (MQ=25)


                                            ttt.CATCTTGCCCCAAATATCCCGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGAt                                                   >  1:2304764/1‑101 (MQ=25)


                                             tt.CATCTTGCCCCAAATATCCCGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATg                                                  >  1:5050196/1‑101 (MQ=25)


                                             tt.CATCTTGCCCCAAATATCCCGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATg                                                  >  1:4605961/1‑101 (MQ=25)


                                             tt.CATCTTGCCCCAAATATCCCGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATg                                                  >  2:4817480/1‑101 (MQ=25)


                                                cATCTTGCCCCAAATATCCCGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGtt                                                >  1:2158369/1‑101 (MQ=25)


                                                  tCTTGCCCCAAATATCCCGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTc                                              >  2:3767922/1‑101 (MQ=25)


                                                   cTTGCCCCAAATATCCCGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGCCCGCGATGTTTCa                                             >  1:3713336/1‑101 (MQ=25)


                                                   cTTGCCCCAAATATCCCGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCa                                             >  1:3373030/1‑101 (MQ=25)


                                                   cTTGCCCCAAATATCCCGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCa                                             >  1:1392896/1‑101 (MQ=25)


                                                    ttGCCACAAATATCCCGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCaa                                            >  2:268856/1‑101 (MQ=25)


                                                     tGCCCCAAATATCCCGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCaaa                                           >  1:90874/1‑101 (MQ=25)


                                                      gCCCCAAATATCCCGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCaaaa                                          >  2:1133990/1‑101 (MQ=25)


                                                         ccAAATATCCCGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCCCCACTTCCGCCACGGGGAAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGAt                                       >  1:639245/1‑101 (MQ=25)


                                                          cAAATATCCCGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGCTGTTTCAAAAGCTc                                      >  2:1458157/1‑101 (MQ=25)


                                                          cAAATATCCCGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATc                                      >  1:3177635/1‑101 (MQ=25)


                                                          cAAATATCCCGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATc                                      >  1:3639681/1‑101 (MQ=25)


                                                          cAAATATCCCGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATc                                      >  1:4346828/1‑101 (MQ=25)


                                                           aaaTATCCCGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATcc                                     >  1:37101/1‑101 (MQ=25)


                                                            aaTATCCCGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCt                                    >  1:1001191/1‑101 (MQ=25)


                                                             atatCCCGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTg                                   >  1:2696537/1‑101 (MQ=37)


                                                             atatCCCGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTg                                   >  1:3496126/1‑101 (MQ=37)


                                                             atatCCCGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTg                                   >  1:1327630/1‑101 (MQ=37)


                                                             atatCCCGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGAAGACCGCGATGTTTCAAAAGATCCTg                                   >  2:4831687/1‑101 (MQ=25)


                                                               atCCCGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGAt                                 >  1:410961/1‑101 (MQ=37)


                                                                tCCCGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATc                                >  1:1326618/1‑101 (MQ=37)


                                                                 cccGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCg                               >  1:61646/1‑101 (MQ=37)


                                                                  ccGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGCCACGGGGCCGCGCCCCGGCCGTCGGCGAAGGAGGCCGGGATCTTTCAAAAGATCCTCAtatc                              >  1:1222201/1‑98 (MQ=16)


                                                                   cGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGcc                             >  2:677817/1‑101 (MQ=37)


                                                                   cGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGcc                             >  1:2385509/1‑101 (MQ=37)


                                                                                  cggggggcag.....cg...cCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGcc                    >  1:209572/10‑101 (MQ=255)


                                                                                  cggggggcag.....cg...cCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGcc                    >  2:1102064/10‑101 (MQ=255)


                                                                                   ggggggcag.....cg...cCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCg                   >  1:4039338/9‑101 (MQ=255)


                                                                                   ggggggcag.....cg...cCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCg                   >  2:4598665/9‑101 (MQ=255)


                                                                                    gggggcag.....cg...cCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCga                  >  1:3006269/8‑101 (MQ=255)


                                                                                    gggggcag.....cg...cCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCga                  >  1:2757361/8‑101 (MQ=255)


                                                                                     ggggcag.....cg...cCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCgag                 >  1:4723963/7‑101 (MQ=255)


                                                                                      gggcag.....cg...cCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCgaga                >  1:1274237/6‑101 (MQ=255)


                                                                                                 cccccccccccGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATCg             <  1:3769696/96‑1 (MQ=255)


                                                                                                  ccccccccccGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATCGc            <  1:1940762/97‑1 (MQ=255)


                                                                                                     cccccccGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATCGCCTg         <  2:2061544/100‑1 (MQ=255)


                                                                                                      ccccccGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATCGCCTGt        >  1:3563025/1‑101 (MQ=255)


                                                                                                       cccccGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATCGCCTGTc       >  1:2088875/1‑101 (MQ=255)


                                                                                                        cccgGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATCGCCTGTCg      <  2:4745654/101‑1 (MQ=255)


                                                                                                        ccccGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATCGCCTGTCg      >  1:3316566/1‑101 (MQ=255)


                                                                                                         cccGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATCGCCTGTCgg     >  2:4457204/1‑101 (MQ=255)


                                                                                                            gCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATCGCCTGTCGGGTg  <  2:248115/101‑1 (MQ=255)


ATGCCTCCGGCGGGGATATTTGGGGCAAGATGAAACCCATCCC.TTT.CATCTTGCCCCAAATATCCCGGGGGGCCCGG..G....G....G.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATCGCCTGTCGGGTG  >  NC_014034/1639927‑1640115

Base quality scores:


ATCG

< 3 ≤


ATCG

< 18 ≤


ATCG

< 26 ≤


ATCG

< 33 ≤


ATCG

< 41 ≤


ATCG