BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	= 799078	137 (0.640)	66 (0.310)	22/174	15.2	0.37	intergenic (+109/‑19)	sucB/lpdA1	dihydrolipoyllysine‑residue succinyltransferase/dihydrolipoyl dehydrogenase
*	?	NC_014034	1640019 =	87 (0.360)	66 (0.310)	22/174	15.2	0.37	intergenic (+99/‑46)	mccB/mccA	methylcrotonoyl‑CoA carboxylase subunit beta/methylcrotonoyl‑CoA carboxylase subunit alpha
Rejected: Position hash score below cutoff.

Only 100 of 151 total aligned reads displayed.


ATGCCTCCGGCGGGGATATTTGGGGCAAGATGAAACCCATCCC.TTTCATCTTGCCCCAAATATCCCGGGGGGCCC...GG..G....G.....G.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATCGCCTGTCGGGTGATCG  >  NC_014034/1639927‑1640119


gtccccacgccggGGATATTGTGGAAAAGAAGAAACAGATCCC.TTTATTAATGCCCCAATTGTCCGGGGGGGCCC...GG..G....G.....GGCCT.CC...CCCCCCGCCACTTcc                                                                                                  <  2:1567964/91‑1 (MQ=255)


aTGCCTCCGGCGGGGATATTTGGGGCAAGATGAAACCCATCCC.TTTCATCTTGCCCCAAATATCCCCGGGGGCCC...GG..G....GGGCA.G.....CG...CCCCCCGCCCCTTcc                                                                                                  >  1:589965/1‑101 (MQ=21)


    cTCCGGCGGGGGTATTTGGGGCAAGATGAAACCCATCCC.TTTTATCTTGCCCCAAATATCCCGGGGGGCCC...GG..G....GGGCA.G.....CG...CCCCCCCCCCCTTCCGccc                                                                                              >  2:1497780/1‑100 (MQ=18)


     tCCGGCGGGGATATTTTGGGCAAGATGAAACCCCTCCC.TTTTATCTTGCCCCCAATATCCCGGGGGGCCC...GG..G....GGGGA.G.....CG...CCCCCCCCCACTTCCCcccc                                                                                             >  2:3979492/1‑99 (MQ=16)


         ggggggATTTTTGGGGAAAAAATAAACCCCTCCC.TTTTCTTTTGCCCCAAATTTCCCGGGGGGGCC...GG..G....G.....GGC...CGCCCCCCCCCGCCACTTCCGCCACggg                                                                                          <  1:4455401/99‑1 (MQ=255)


          gggggATTTTGGGGCCAAAAACAACCCCATCCC.TTTCATTTTCCCCAAAATCCCCGGGGGGGCCG...GG..G....GGGCA.G.....CC...CCCCCCGCCACTTCCGCCACGGGGc                                                                                        <  1:1590094/100‑1 (MQ=255)


          cggGGATATTTGGGGCAAGATGAAACCCATCCC.TTTCATCTTGCCCCAAATATCCCGGGGGGCCC...GG..G....GGGCA.G.....CG...CCCCCCGCCACTTCCGCCACGGGGc                                                                                        >  2:1095931/1‑101 (MQ=25)


          cggGGACATTTGGGGCAAGATGAAACCCATCCC.TTTCATCTTGCCCCAAATATCCCGGGGGGCCC...GG..G....GGGCA.G.....CG...CCCCCCGCCACTTCCGCCCCGGGGc                                                                                        >  2:700724/1‑101 (MQ=21)


           ggggATATTTGGGGCAAGATGAAACCCATCCC.TTTCATCTTGCCCCAAATATCCCGGGGGGCCC...GG..G....GGGCA.G.....CG...CCCCCCGCCACTTCCGCCACGGGGCa                                                                                       >  2:2004887/1‑101 (MQ=25)


            gggATATTTGGGGCAAGATGAAACCCATCCC.TTTCATCTTGCCCCAAATATCCCGGGGGGCCC...GG..G....GGGCA.G.....CG...CCCCCCGCCACTTCCGCCACGGGGCAg                                                                                      >  1:3731726/1‑101 (MQ=25)


            gggATATTTGGGGCAAGATGAAACCCATCCC.TTTCATCTTGCCCCAAATATCCCGGGGGGCCC...GG..G....GGGCA.G.....CG...CCCCCCGCCACTTCCGCCACGGGGCAg                                                                                      >  1:3207545/1‑101 (MQ=21)


             ggATATTTGGGGCAAGATGAAACCCATCCC.TTTCATCTTGCCCCAAATATCCCGGGGGGCCC...GG..G....GGGCA.G.....CG...CCCCCCGCCACTTCCGCCACGGGGCAgc                                                                                     >  2:4532976/1‑101 (MQ=21)


             ggATATTTGGGGCAAGATGAAACCCATCCC.TTTCATCTTGCCCCAAATATCCCGGGGGGCCC...GG..G....GGGCA.G.....CG...CCCCCCGCCACTTCCGCCACGGGGCAgc                                                                                     >  1:1455477/1‑101 (MQ=25)


             ggATATTTGGGGCAAGATGAAACCCATCCC.TTTCATCTTGCCCCAAATATCCCGGGGGGCCC...GG..G....GGGCA.G.....CG...CCCCCCGCCACTTCCGCCACGGGGCAgc                                                                                     >  2:34875/1‑101 (MQ=25)


             ggATATTGGGGACAAGATGACCCCCTCCCC.TTTCATCTGCCCCCAAATAGCCGGGGGGGCGG...GG..GGGGCG.....G.....CG...CCCCCCGCCACTTCCGCCACGGGGCAgc                                                                                     <  2:2453547/101‑1 (MQ=255)


              gATATTTGGGGCAAGATGAAACCCATCCC.TTTCATCTTGCCCCAAATATCCCGGGGGGCCC...GG..G....GGGCA.G.....CG...CCCCCCGCCACTTCCGCCACGGGGCAgcg                                                                                    >  1:923428/1‑101 (MQ=25)


               atatTTGGGGCAAGATGAAACCCATCCC.TTTCATCTTGCCCCAAATATCCCGGGGGGCCC...GG..G....GGGCA.G.....CG...CCCCCCGCCACTTCCGCCACGGGGCAgcgc                                                                                   >  2:879019/1‑101 (MQ=21)


                 atTTGGGGCAAGATGAAACCCATCCC.TTTCATCTTGCCCCAAATATCCCGGGGGGCCC...GG..G....GGGCA.G.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGccc                                                                                 >  1:3844587/1‑101 (MQ=25)


                 atTTGGGGCAAGATGAAACCCATCCC.TTTCATCTTGCCCCAAATATCCCGGGGGGCCC...GG..G....GGGCA.G.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGccc                                                                                 >  2:3315722/1‑101 (MQ=25)


                  ttggggaCAAGATAACCCCCATCCT.TTTCTTCTCGCCCAAAATACCCGGGGGCGCCG...GG..GGGGCG.....G.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGcccc                                                                                <  2:3395228/98‑1 (MQ=255)


                   ttGGGGCAAGATAAAACCCATCCC.TTTCATCTTGCCCCAAATATCCCGGGGGGCCC...GG..G....GGGCA.G.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCg                                                                               >  1:2743243/1‑101 (MQ=21)


                    tGGGGCAAGATGAAACCCATCCC.TTTCATCTTGCCCCAAATATCCCGGGGGGCCC...GG..G....GGGCA.G.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCgg                                                                              >  2:2402813/1‑101 (MQ=25)


                     ggggCAAGATGAAACCCATCCC.TTTCATCTTGCCCCAAATATCCCGGGGGGCCC...GG..G....GGGCA.G.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGc                                                                             >  2:1244857/1‑101 (MQ=25)


                      gggCAAGATGAAACCCATCCC.TTTCATCTTGCCCCAAATATCCCGGGGGGCCC...GG..G....GGGCA.G.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGcc                                                                            >  1:4829713/1‑101 (MQ=25)


                        gCAAGATGAAACCCATCCC.TTTCATCTTGCCCCAAATATCCCGGGGGGCCC...GG..G....GGGCA.G.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGt                                                                          >  2:4094378/1‑101 (MQ=21)


                         gaaaaaaaaaCCCCTCCC.TTTCCTCTTGCCCCAAAAGCGCGGGGGGGCCC...GG..G....G.....GGCCCCCC...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGt                                                                          <  1:1392614/94‑1 (MQ=255)


                         cAAGATGACCCCCCCCCT.TTCCATTTTCCCCAAAATACCCGGGGGGGCCG...GG..G....G.....GGCAC.CC...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGtt                                                                         <  2:2438211/101‑1 (MQ=255)


                         cAAGATGAAACCCATCCC.TTTCATCTTGCCCCAAATATCCCGGGGGGCCC...GG..G....GGGCA.G.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGtt                                                                         >  1:3071358/1‑101 (MQ=25)


                         cAAGATGAAACCCATCCA.TTTCATCTTGCCCCAAATATACCGGGGGGCCC...GGTAG....GAA...G.....CG...CCCTCCGCCACTTCCGCCACACGGCAGCGCCCCGGccccg                                                                         >  2:1867362/1‑98 (MQ=19)


                          aaGATGAAACCCATCCC.TTTCATCTTGCCCCAAATATCCCGGGGGGCCC...GG..G....GGGCA.G.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTg                                                                        >  1:2719933/1‑101 (MQ=25)


                           aGATGAAACCCATCCC.TTTCATCTTGCCCCAAATATCCCGGGGGGCCC...GG..G....GGGCA.G.....CG...CCCCCCGCCACTTCCTCCACGGGGCAGCGCCCCGGCCGTTgc                                                                       >  2:3086703/1‑100 (MQ=21)


                           aGATGAAACCCATCCC.TTTCATCTTGCCCCAAATATCCCGGGGGGCCC...GG..G....GGGCA.G.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGa                                                                       >  2:3506602/1‑101 (MQ=25)


                           aGATGAAACCCATCCC.TTTCATCTTGCCCCAAATATCCCGGGGGGCCC...GG..G....GGGCA.G.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGa                                                                       >  1:3283417/1‑101 (MQ=21)


                           aGATGAAACCCATCCC.TTTCATCTTGCCCCAAATATCCCGGGGGGCCC...GG..G....GGGCA.G.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGa                                                                       >  2:1940625/1‑101 (MQ=25)


                           aGATGAAACCCATCCC.TTTCATCTTGCCCCAAATATCCCGGGGGCCCC...GG..G....GGGCA.G.....CC...CCCCCCGCCCCTTCCGCCACGGGCCAGCGCCCCGGCGGtcgc                                                                       >  1:1275983/1‑98 (MQ=18)


                             aTGAAACCCATCCC.TTTCATCTTGCCCCAAATATCCCGGGGGGCCC...GG..G....GGGCA.G.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACg                                                                     >  2:2295140/1‑101 (MQ=21)


                              tGAAACCCATCCC.TTTCATCTTGCCCCAAATATCCCGGGGGGCCC...GG..G....GGGCA.G.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGa                                                                    >  2:3314490/1‑101 (MQ=25)


                               gAAACCCATCCC.TTTCATCTTGCCCCAAATATCCCGGGGGGCCC...GG..G....GGGCA.G.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACgca                                                                   >  2:3780852/1‑99 (MQ=21)


                               gAAACCCATCCC.TTTCATCTTGCCCCAAATATCCCGGGGGGCCC...GG..G....GGGCA.G.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGaa                                                                   >  1:774800/1‑101 (MQ=25)


                               gAAACCCATCCC.TTTCATCTTGCCCCAAATATCCCGGGGGGCCC...GG..G....GGGCA.G.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGaa                                                                   >  1:2726290/1‑101 (MQ=25)


                               aaaaCCCCTCCCTTTTCCTCTTCCCCAAAATCCCCGGGGGGGCCG...GG..G....G.....GC....CGCCCCCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGa                                                                    <  2:1938192/100‑1 (MQ=255)


                                aaaCCCATCCC.TTTCATCTTGCCCCAAATATCCCGGGGGGCCC...GG..G....GGGCA.G.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAg                                                                  >  1:3963705/1‑101 (MQ=25)


                                aaaCCCATCCC.TTTCATCTTGCCCCAAATATCCCGGGGGGCCC...GG..G....GGGCA.G.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAg                                                                  >  2:3742600/1‑101 (MQ=25)


                                 aaCCCATCCC.TTTCATCTTGCCCCAAATATCCCGGGGGGCCC...GG..G....GGGCA.G.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAgg                                                                 >  2:3342295/1‑101 (MQ=25)


                                     cccccc.TTTCATCTCG.CCCAAAAGCCCCGGGGGGCCC...GG..G....G.....GGGCCCCC...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGAc                                                             <  1:1580261/98‑1 (MQ=255)


                                       tCCC.TTTCATCTTGCCCCAAATATCCCGGGGGGCCC...GG..G....GGGCA.G.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACcg                                                           >  2:526029/1‑101 (MQ=25)


                                        ccc.TTTCATCTTGCCCCAAATATCCCGGGGGGCCC...GG..G....GGGCA.G.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACcgc                                                          >  1:3600341/1‑101 (MQ=25)


                                        ccc.TTTCATCTTGCCCCAAATATCCCGGGGGGCCC...GG..G....GGGCA.G.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGCTGACGAAGGAGACcgc                                                          >  2:27481/1‑101 (MQ=21)


                                         cc.TTTCATCTTGCCCCAAATATCCCGGGGGGCCC...GG..G....GGGCA.G.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACcgcg                                                         >  1:262078/1‑101 (MQ=25)


                                            tttCATCTTGCCCCAAATATCCCGGGGGGCCC...GG..G....GGGCA.G.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGAt                                                       >  1:2304764/1‑101 (MQ=25)


                                             ttttcttcgtcccAAAAATCCCCGGGGGCCCCGGGG..G....G.....G.....CGCCCCCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGa                                                        <  1:2026910/91‑1 (MQ=255)


                                             ttCATCTTGCCCCAAATATCCCGGGGGGCCC...GG..G....GGGCA.G.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATg                                                      >  1:4605961/1‑101 (MQ=25)


                                             ttCATCTTGCCCCAAATATCCCGGGGGGCCC...GG..G....GGGCA.G.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATg                                                      >  2:4817480/1‑101 (MQ=25)


                                             ttCATCTTGCCCCAAATATCCCGGGGGGCCC...GG..G....GGGCA.G.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATg                                                      >  1:5050196/1‑101 (MQ=25)


                                              tCATCTTGCCCCAAATATCCCGGGGGGCCC...GG..G....GGGCA.G.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGt                                                     >  2:1231406/1‑101 (MQ=25)


                                                aTCTTGCCCCAAATATCCCGGGGGGCCC...GG..G....GGGCA.G.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGttt                                                   >  1:4745977/1‑101 (MQ=25)


                                                 tCTTGCCCCAAATATCCCGGGGGGCCC...GG..G....GGGCA.G.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTc                                                  >  2:3767922/1‑101 (MQ=25)


                                                  cTTGCCCCAAATATCCCGGGGGGCCC...GG..G....GGGCA.G.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGCCCGCGATGTTTCa                                                 >  1:3713336/1‑101 (MQ=25)


                                                   ttGCCCCAAATATCCCGGGGGGCCC...GG..G....GGGCA.G.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCaa                                                >  1:34394/1‑101 (MQ=25)


                                                   ttGCCCCAAATATCCCGGGGGGCCC...GG..G....GGGCA.G.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCaa                                                >  2:2609102/1‑101 (MQ=25)


                                                   ttGCCACAAATATCCCGGGGGGCCC...GG..G....GGGCA.G.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCaa                                                >  2:268856/1‑101 (MQ=25)


                                                   tgtccccAAATATGGCGGGGGGCCC...GG..G....GGGGCAG.....CC...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCa                                                 <  2:587731/98‑1 (MQ=255)


                                                     gCCCCAAATATCCCGGGGGGCCC...GG..G....GGGCA.G.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCaaaa                                              >  2:52350/1‑101 (MQ=25)


                                                      ccccAAATATCCCGGGGGGCCC...GG..G....GGGCA.G.....CG...CCCCCCGCCACTTCCGCCCCGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAg                                             >  1:921750/1‑101 (MQ=25)


                                                        ccAAATATCCCGGGGGGCCC...GG..G....GGGCA.G.....CG...CCCCCCCCCACTTCCGCCACGGGGAAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGAt                                           >  1:639245/1‑101 (MQ=25)


                                                         cAAATATCCCGGGGGGCCC...GG..G....GGGCA.G.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGCTGTTTCAAAAGCTc                                          >  2:1458157/1‑101 (MQ=25)


                                                         cAAATATCCCGGGGGGCCC...GG..G....GGGCA.G.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATc                                          >  1:3639681/1‑101 (MQ=25)


                                                         cAAATATCCCGGGGGGCCC...GG..G....GGGCA.G.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATc                                          >  1:4346828/1‑101 (MQ=25)


                                                         cAAATATCCCGGGGGGCCC...GG..G....GGGCA.G.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATc                                          >  1:3177635/1‑101 (MQ=25)


                                                          aaaTATCCCGGGGGGCCC...GG..G....GGGCA.G.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATct                                         >  1:494676/1‑100 (MQ=25)


                                                           aaTATCCCGGGGGGCCC...GG..G....GGGCA.G.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCt                                        >  1:1001191/1‑101 (MQ=25)


                                                            atatCCCGGGGGGCCC...GG..G....GGGCA.G.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTg                                       >  1:3496126/1‑101 (MQ=37)


                                                            atatCCCGGGGGGCCC...GG..G....GGGCA.G.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTg                                       >  1:2696537/1‑101 (MQ=37)


                                                            atatCCCGGGGGGCCC...GG..G....GGGCA.G.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGAAGACCGCGATGTTTCAAAAGATCCTg                                       >  2:4831687/1‑101 (MQ=25)


                                                             tatCCCGGGGGGCCC...GG..G....GGGCA.G.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGa                                      >  2:2780132/1‑101 (MQ=37)


                                                              atCCCGGGGGGCCC...GG..G....GGGCA.G.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGAt                                     >  1:410961/1‑101 (MQ=37)


                                                               tCCCGGGGGGCCC...GG..G....GGGCA.G.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATc                                    >  1:1326618/1‑101 (MQ=37)


                                                                 ccGGGGGGCCC...GG..G....GGGCA.G.....CG...CCCCCCGCCACTTCCGCCACGGGGCCGCGCCCCGGCCGTCGGCGAAGGAGGCCGGGATCTTTCAAAAGATCCTCAtatc                                  >  1:1222201/1‑98 (MQ=16)


                                                                  cGGGGGGCCC...GG..G....GGGCA.G.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGcc                                 >  2:677817/1‑101 (MQ=37)


                                                                  cGGGGGGCCC...GG..G....GGGCA.G.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGcc                                 >  1:1394266/1‑101 (MQ=37)


                                                                                    ccggggggcag.....cg...cCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGc                         >  1:1348291/11‑101 (MQ=255)


                                                                                     cggggggcag.....cg...cCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGcc                        >  2:1102064/10‑101 (MQ=255)


                                                                                     cggggggcag.....cg...cCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGcc                        >  1:209572/10‑101 (MQ=255)


                                                                                      ggggggcag.....cg...cCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCg                       >  1:4039338/9‑101 (MQ=255)


                                                                                      ggggggcag.....cg...cCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCg                       >  2:4598665/9‑101 (MQ=255)


                                                                                       gggggcag.....cg...cCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCga                      >  1:3006269/8‑101 (MQ=255)


                                                                                       gggggcag.....cg...cCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCga                      >  1:2757361/8‑101 (MQ=255)


                                                                                           gcag.....cg...cCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATc                  >  2:4713203/4‑101 (MQ=255)


                                                                                             ag.....cg...cCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATCGc                >  1:2351030/2‑101 (MQ=255)


                                                                                                  gccccccccccccGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGAt                   <  2:3207294/94‑1 (MQ=255)


                                                                                                    cg...cCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATCGCCt              >  1:748447/1‑101 (MQ=255)


                                                                                                    cccccccccccGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATCg                 <  1:3769696/96‑1 (MQ=255)


                                                                                                    cccccccccccGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGACCCTGATCGCCAACAGGGCCGAGATCg                 <  2:3731448/96‑1 (MQ=255)


                                                                                                     ccccccccccGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATCGc                <  1:1940762/97‑1 (MQ=255)


                                                                                                        ccgcgccGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATCGCCTg             <  1:2147080/96‑1 (MQ=255)


                                                                                                        cccccccGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATCGCCTg             <  2:2061544/100‑1 (MQ=255)


                                                                                                           ccccGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATCGCCTGTCg          >  1:3316566/1‑101 (MQ=255)


                                                                                                            cccGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATCGCCTGTCgg         >  2:4457204/1‑101 (MQ=255)


                                                                                                                  aCTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATCGCCTGTCGGGTGATc   >  1:4946365/1‑101 (MQ=255)


                                                                                                                   cTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGGCGGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCTGAGTTCGCCTGTCGGGGGATCg  >  2:612118/1‑101 (MQ=255)


ATGCCTCCGGCGGGGATATTTGGGGCAAGATGAAACCCATCCC.TTTCATCTTGCCCCAAATATCCCGGGGGGCCC...GG..G....G.....G.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATCGCCTGTCGGGTGATCG  >  NC_014034/1639927‑1640119

Base quality scores:


ATCG

< 3 ≤


ATCG

< 16 ≤


ATCG

< 24 ≤


ATCG

< 33 ≤


ATCG

< 40 ≤


ATCG