Read alignment evidence...
  seq id position change freq score reads annotation genes product
*NC_0140343,580,5590A→G100.0% 0.8 1intergenic (‑62/+69)RCAP_rct00051/RCAP_rcr00012tRNA‑Ala/16S ribosomal RNA
Rejected: E-value exceeds prediction threshold.
Reads supporting (aligned to +/- strand):  new base (1/0):  ref base (0/0):  total (1/0)

TCCCGGTTCGCACCCTGTGTGTTCTGAAGAGATATGAGGACGGCCTGGCCGCATATGAGGCTCTGACTGAGCCTCGTGCTAAGTGTCTTCTGTAGAGAGGAA  >  NC_014034/3580520‑3580621
                                       |                                                              
tCCCGGGTCGCACCCTGTGTGTTCTGAAGAGTTATGAGGGCGGCCTGGCCGCCTATGAAGCTGTGCCTGA.ACTGCTGCTAAGTGTCTTCTCTggagcgtaa  >  1:2141527/1‑96 (MQ=14)
                                       |                                                              
TCCCGGTTCGCACCCTGTGTGTTCTGAAGAGATATGAGGACGGCCTGGCCGCATATGAGGCTCTGACTGAGCCTCGTGCTAAGTGTCTTCTGTAGAGAGGAA  >  NC_014034/3580520‑3580621

Base quality scores:  ATCG  < 3 ≤  ATCG  < 7 ≤  ATCG  < 14 ≤  ATCG  < 22 ≤  ATCG  < 35 ≤  ATCG