| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 1,329,189 | C→G | 17.6% | intergenic (‑127/+114) | RCAP_rcc01255 ← / ← RCAP_rcc01256 | hypothetical protein/hypothetical protein |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 1,329,189 | 0 | C→G | 17.6% | 19.3 ‑2.6 ‑0.1 | 133 | intergenic (‑127/+114) | RCAP_rcc01255/RCAP_rcc01256 | hypothetical protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): new base (1/26): ref base (19/87): total (20/113) | ||||||||||
| Fisher's exact test strand distribution p-value = 7.49e-02 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 7.30e-01 | ||||||||||
Only 100 of 232 total aligned reads displayed.
TGATGGGCGCGCAGCAGGTAGCCTTCCGCGCATCGAATCCCGCCTGCTACCTCTCGACGATGGGCAACAGGGGGGCTTTGTGGCTCGCCCCGAGCGGGGGCGAG.CCGTGATTACACGTG.CGGGCGGTGATGGGAGCCCAGTGCGTGGGCGATGGAGAGCCGTGTGGAGCATGACCCGCCGAAGAGCGGGCGGCTGCAGCCA > NC_014034/1329089‑1329289
|
gATGGGCGCGCAGCAGGTAGCCTTCCGCGCATCGCATCCCGCCTGCTACCTCTCGACCATGGGCAACAGGGGGGCTTTGTGGCTCGCCCCGAGCGGGGGCg < 1:4317117/101‑1 (MQ=255)
gATGGGCGCGCAGCAGGTAGCCTTCCGCGCATCGAATCCCGCCTGCTACCTCTCGACGATGGGCAACAGGGGGGCTTTGTGGCTCGCCCCGAGCGGGGGCg < 2:3527680/101‑1 (MQ=255)
gATGGGCGCGCAGCAGGTAGCCTTCCGCGCATCGAATCCCGCCTGCTACCTCTCGACGATGGGCAACAGGGGGGCTTTGTGGCTCGCCCCGAGCGGGGGCg < 2:4044644/101‑1 (MQ=255)
gATGGGCGCGCAGCAGGTAGCCTTCCGCGCATCGAATCCCGCCTGCTACCTCTCGACGATGGGCAACAGGGGGGCTTTGTGGCTCGCCCCGAGCGGGGGCg < 1:1623621/101‑1 (MQ=255)
gATGGGCGCGCAGCAGGTAGCCTTCCGCGCATCGAATCCCGCCTGCTACCTCTCGACGATGGGCAACAGGGGGGCTTTGTGGCTCGCCCCCGGCGGGGGCg > 1:133950/1‑101 (MQ=255)
tGGGCGCGCAGCAGGTAGCCTTCCGCGCATCGAATCCCGCCTGCTACCTCTCGACGATGGGCAACAGGGGGGCTTTGTGGCTCGCCCCGAGCGGGGGCGAg < 2:2959032/101‑1 (MQ=255)
tGGGCGCGCAGCAGGTAGCCTTCCGCGCATCGAATCCCGCCTGCTACCTCTCGACGATGGGCAACAGGGGGGCTTTGTGGCTCGCCCCGAGCGGGGGCGAg < 1:4187159/101‑1 (MQ=255)
gggCGCGCAGCAGGTAGCCTTCCGCGCATCGAATCCCGCCTGCTACCTCTCGACGATGGGCAACAGGGGGGCTTTGTGGCTCTCCCCGAGCGGGGGCGAG.c < 1:3689869/101‑1 (MQ=255)
gcgcccAGCAGGTAGCCTTCCGCGCATCGAATCCCGCCTGCTACCTCTCGACGATGGGCAACAGGGGGGCTTTGTGGCTCGCCCCGAGCGGGGGCGAG.CCg < 1:51926/101‑1 (MQ=255)
cgcgcAGCAGGTAGCCTTCCGCGCATCGAATCCCGCCTGCTACCTCTCGACGATGGGCAACAGGGGGGCTTTGTGGCTCGCCCCGAGCGGGGGCGAG.CCGt < 2:1834374/101‑1 (MQ=255)
gcgcAGCAGGTAGCCTTCCGCGCATCGAATCCCGCCTGCTACCTCTCGACGATGGGCAACAGGGGGGCTTTGTGGCTCGCCCCGAGCGGGGGCGAG.CCGTg < 1:794044/101‑1 (MQ=255)
gcccagcagGTAGCCTTCCGCGCATCGAATCCCGCCTGCTCCCTCTCGACGATGGGCAACAGGGGGGCTTTGTGGCTCGCCCCGAGCGGGGGCGAG.CCGTg < 1:3776002/98‑1 (MQ=255)
cagcagGTAGCCTTCCGCGCATCGAATCCCGCCTGCTACCTCTCGACGATGGGCAACAGGGGGGCTTTGTGGCTCGCCCCGAGCGGGGGCGAG.CCGTGAtt < 2:3280124/101‑1 (MQ=255)
agcggGTACCCTTCCGCGCAGCGAATCCCCCCTGCTGCCTCTCGACGAGGGGCAACAGGGGGGCTTTGTGGCCCCCCCCGAGCGGGGGCGAG.CCGTGATTa < 2:3945870/101‑1 (MQ=255)
agcagGTAGCCTTCCGCGCATCGAATCCCGCCTGCTACCTCTCGACGATGGGCAACAGGGGGGCTTTGTGGCTCGCCCCGAGCGGGGGCGAG.CCGTGATTa < 1:2739573/101‑1 (MQ=255)
agcagGTAGCCTTCCGCGCATCGAATCCCGCCTGCTACCTCTCGACGATGGGCAACAGGGGGGCTTTGTGGCTCCCCCCCCGCGGGGGGGGG.CCgggggtc > 1:1108695/1‑95 (MQ=255)
gcgggTAGCCTTCCGCGCATCGAATCCCGCCTGCTACCTCTCGACGATGGGCAACAGGGGGGCTTTGTGGCTCGCCCCGAGCGGGGGCGAG.CCGTGATTac < 1:1674273/98‑1 (MQ=255)
gcagGTAGCCTTCCGCGCATCGAATCCCGCCTGCTACCTCTCGACGATGGGCAACAGGGGGGCTTTGTGGCTCCCCCCCGGCGGGGGGGGG.CCGGGGTTac > 2:3929427/1‑101 (MQ=255)
cagGTAGCCTTCCGCGCATCGAATCCCGCCTGCTACCTCTCGACGATGGGCAACAGGGGGGCTTTGTGGCTCCCCCCGCGCCGGGGGGAG.CCggcgtttca > 1:855418/1‑93 (MQ=255)
cagGTAGCCTTCCGCGCATCGAATCCCGCCTGCTACCTCTCGACGATGGGCAACAGGGGGGCTTTGTGGCTCCCCCCCCGCGGGGGGGGG.GCGCGGTTaca > 1:998878/1‑101 (MQ=255)
cagGTAGCCTTCCCCGCAGCAAACCCCGACTGCTACCTCCCGACGATGGACAACAGGGGGGCTTTGTGGCTCGCCCCGAGGGGGGGCGAG.CCGTGATTaca < 2:2246442/101‑1 (MQ=255)
agGTAGCCTTCCGCGCATCGAATCCCGCCTGCTACCTCTCGACGATGGGCAACAGGGGGGCTTTGTGGCTCGCCCCGAGCGGGGGCGAG.CCGTGATTacac < 2:610687/101‑1 (MQ=255)
ggTACCCTTCCGCGCATCGAACCCCGCCTGCTACCTCTCGACGATGGGCAACAGGGGGGCTTTGTGGCTCGCCCCGAGCGGGGGCGAG.CCGTGATTACACg < 2:1245527/101‑1 (MQ=255)
tAGCCTTCCGCGCATCGAACCCCGCCTGCTCCCTCTCGACGATGGGCAACAGGGGGGCTTTGTGGCTCGCCCCGAGCGGGGGCGAG.CCGTGATTACACGTg < 1:3301193/101‑1 (MQ=255)
gCCTTCCGCGCATCGAATCCCGCCTGCTACCTCTCGACGATGGGCAACAGGGGGGCTTTGTGGCTCCCCCCCAGCGGGGGGGGG.CCGGGGTTACACGTg.cg > 2:4814503/1‑101 (MQ=255)
ccTTCCGCGCATCGAATCCCGCCTGCTACCTCTCGACGATGGGCAACAGGGGGGCTTTGTGGCTCGCCCCCCGCGGGGGGGGG.CCGCGATTACAAGTg.cgg > 2:2619073/1‑101 (MQ=255)
cTTCCGCGCATCGAATCCCGCCTGCTACCTCTCGACGATGGGCAACAGGGGGGCTTTGTGGCTCGCCCCGACCGGGGGCGCG.CCGTGGTTAAACCCg.cggg > 2:4979413/1‑101 (MQ=255)
ttCCGCGCATCGAATCCCGCCTGCTACCTCTCGACGATGGGCAACAGGGGGGCTTTGTGGCTCGCCCCCCGCGGGGGCGGG.GCGTGGTTATACGGg.ggggg > 2:427932/1‑100 (MQ=255)
tCCGCGCATCGAATCCCGCCTGCTACCTCTCGACGATGGGCAACAGGGGGGCTTTGTGGCTCCCCCCGCGCGGGGGGGGG.CCGGGATTACACGCg.cgggcg > 1:5011959/1‑101 (MQ=255)
tCCGCGCATCGAATCCCGCCTGCTACCTCTCGACGATGGGCAACAGGGGGGCTTTGTGGCTCCCCCCGAGCGGGGGCGGG.CCGGGATTACACGTg.cgggcg > 1:1568277/1‑101 (MQ=255)
cgcATCGACTCCCGCCTGCTCCCTCTCGACGATGGGCAACAGGGGGGCTTTGTGGCTCGCCCCGAGCGGGGGCGAG.CCGTGATTACACGTG.CGGGCGGTGa < 2:4597738/101‑1 (MQ=255)
gcATCGAATCCCGCCTGCTACCTCTCGACGATGGGCAACAGGGGGGCTTTGTGGCTCCCCCCCGGCGGGGGGGAG.CCGGGGTTACACGCG.GGGGCGGTggg > 1:3551365/1‑99 (MQ=255)
ccATAGAATCCCGCCTGCTCCCTCTCGACGAGGGGCAACGGGGGGGCTTTGTGGCTCGCCCCGAGGGGGGGCGAG.CCGTGATTACACGTG.CGGGCGGTGAt < 2:3451794/100‑1 (MQ=255)
aTCGAATCCCCGCCGCTGCGTCTCGACGAGGGGCAACAGGGGGTCTTTGTGTCTCTCCCCGAGCGGGGGCGAG.CCGTGATTACACGTG.CGGGCGGTGATgg < 2:743155/101‑1 (MQ=255)
tCGAACCCCGCCTGCTACCTCTCGACGATGGGCAACGGGGGGGCTTTGTGGCTCGCCCCGAGCGGGGGCGAG.CCGTGATTACACGTG.CGGGCGGTGATggg < 1:3785914/101‑1 (MQ=255)
cGAATCCCGCCTGCTACCTCTCGACGATGGGCAACAGGGGGGCTTTGTGGCTCGCCCCGAGCGGGGGCGGG.CCGTGATTACACGTG.CGGGCGGGGATgggg > 2:4001684/1‑100 (MQ=255)
cGAATCCCGCCTGCTACCTCTCGACGATGGGCAACAGGGGGGCTTTGTGGCTCCCCCCGCGCGGGGGGGGG.CCGGGAGTACACGTG.CGGGGGGGGGTgggg > 1:2947581/1‑100 (MQ=255)
cGAATCCCGCCTGCTACCTCTCGACGATGGGCAACAGGGGGGCTTTGTGGCTCCCCCCCAGCGGGGGCGGG.GCGGGGGTACACGTG.CGGGCGGGGATgggg > 2:3066380/1‑100 (MQ=255)
cGAACCCCGCCTGCTCCCTCTCGACGAGGGGCAACAGGGGGGCTTTGTGGCTCGCCCCGAGCGGGGGCGAG.CCGTGATTACACGTG.CGGGCGGTGATGGGa < 2:1789505/101‑1 (MQ=255)
gAATCCCGCCTGCTACCTCTCGAGGAGGGGCAACGGGGGGGCTTTGGGGCTCGCCCCGAGGGGGGGGGAG.CCGTGATTACACGTG.CGGGCGGTGATGGGAg < 2:1526293/101‑1 (MQ=255)
gAATCCCGCCTGCTACCTCTCGACGATGGGCAACAGGGGGGCTTTGTGGCTCGCCCCCAGCGGGGGGGAG.GCGGGATTACACGGG.CGGGGGGGGATGGGAg > 1:4508895/1‑101 (MQ=255)
gAATCCCGCCTGCTACCTCTCGACGATGGGCAACAGGGGGGCTTTGTGGCTCGCCCCCAGCGGGGGGGAG.CCGGGGTTTCACGCG.CGGGGGGGGGGGGGAg > 1:2250848/1‑101 (MQ=255)
gAATCCCGCCTGCTACCTCTCGACGATGGGCAACAGGGGGGCTTTGTGGCTCGCCCCCAGCGGGGGGGAG.CCGCGATTACACGGGCcgggcggggggggag > 2:2440508/1‑93 (MQ=255)
cGCCTGCTCCCTCTCGACGATGGGCAACGGGGGGGCTTTGTGGCTCGCCCGGGGGGGGGGCGAG.CCGTGATTACACGTG.CGGGCGGTGATGGGAGCCCAGt < 1:3419012/101‑1 (MQ=255)
cGCCTGCTCCCTCTCGACGATGGGCAACAGGGGGGCTTTGTGGCTCGCCCCGAGGGGGGGCGAG.CCGTGATTACACGTG.CGGGCGGTGATGGGAGCCCAGt < 1:3765290/101‑1 (MQ=255)
cGCCTGCTCCCTCTCGACGATGGGCAACAGGGGGCCTTTGTGGCCCGCCCCGAGCGGGGGGGAG.CCGTGATTACACGTG.CGGGCGGTGATGGGAGCCCAGt < 1:354005/101‑1 (MQ=255)
cGCCTGCTCCCCCCCGGCGATGGGCAACGGGGGGGCTTTGTGGCTCGCCCCGAGCGGGGGCGAG.CCGTGATTACACGTG.CGGGCGGTGATGGGAGCCCAGt < 1:1366212/101‑1 (MQ=255)
ccTGCTACCTCTCGACGATGGGCAACAGGGGGGCTTTGTGGCTCCCCCCGAGCGGGGGCGAG.CCGTGGTTACACGTG.CGGGCGGGGGTGGGAGGCCAGGGc > 2:3745450/1‑101 (MQ=255)
cTGCTACCTCTCGACGATGGGCAACAGGGGGGCTTTGTGGCTCGCCCCGAGCGGGGGCGGG.CCGGGATTACACGTG.CGGGCGGGGGTGGGAGCCCAGGGCg > 2:218948/1‑101 (MQ=255)
cTGCTACCTCTCGACGATGGGCAACAGGGGGGCTTTGTGGCTCCCCCCCAGCGGGGGCGAG.CCGGGGGTACACGGG.GGGGGGGGGGTGGGGGGCCaaggcg > 1:2504711/1‑96 (MQ=255)
tGCTCCCTCTCGACGATGGGCAACAGGGGGGCTTTGTGGCTCGCCCCGAGCGGGGGCGAG.CCGTGATTACACGTG.CGGGCGGTGATGGGAGCCCAGTGCGt < 1:4001986/101‑1 (MQ=255)
tGCTACCTCTCGACGATGGGCAACAGGGGGGCTTTGTGGCTCGCCCCGAGCGGGGGCGAG.CCGTGATTACACGTG.CGGGCGGTGATGGGAGCCCAGTGCGt < 2:4564847/101‑1 (MQ=255)
tGCTACCTCTCGACGATGGGCAACAGGGGGGCTTTGTGGCTCCCCCCCAGCGGGGGGGAG.CCGGGATTACACCTG.CGGGGGGGGGTGGGGGCCCCGGGCgg > 1:1209681/1‑100 (MQ=255)
tccccctggacgaGGGGCAACGGGGGGGTTTTGGGGCTCCCCCCGGGCGGGGGGGAG.CCGTGATTACACGTG.CGGGCGGTGATGGGAGCCCAGTGCGTggg < 1:1074588/93‑1 (MQ=255)
cgctctCGAGGGTGGGCAACGGGGGGGCTTTGCGGTCCGCCCCGGGAGGGGGGGAG.CCGTGATTACACGTG.CGGGCGGTGATGGGAGCCCAGTGCGTGGGc < 2:4968728/99‑1 (MQ=255)
cccTCTGGGCGAGGGCCAATGGGGGGTTTTTGTGGCCCCCCCGTAGCGGGGGCGAG.CCGTGATTACACGTG.CGGGCGGTGATGGGAGCCCAGTGCGTGGGc < 1:308006/100‑1 (MQ=255)
cccTCTCGACGATGGGCAACGGGGGGGCTTTGTGGCTCGCCCCGAGCGGGGGCGAG.CCGTGATTACACGTG.CGGGCGGTGATGGGAGCCCAGTGCGTGGGc < 2:2595410/100‑1 (MQ=255)
aCCTCTCGACGATGGGCAACAGGGGGGCTTTGTGGCTCCCCCCGAGCGGGGGCGGG.CCGTGGTTACACGGG.CGGGCGGGGGTGGGGGCCCCGCGCGTgggg > 2:1617580/1‑100 (MQ=255)
ctcGACGATGGGGAACGGGGGGGCTTTGGGGCTCGCCCGGGGCGGGGGGGAG.CCGTGATTACACGTG.CGGGCGGTGATGGGAGCCCAGTGCGTGGGCGATg < 2:860950/101‑1 (MQ=255)
cgacgaTGGGCAACAGGGGGGCTTTGTGGCTCCCCCCGAGCGGGGGCGAG.CCGTGATTACACGTG.CGGGCGGGGATGGGGGCCCAGTGCGTGGGCGATggg > 2:3222372/1‑100 (MQ=255)
gacgaTGGGCAACAGGGGGGCTTTGTGGCTCGCCCCCAGCGGGGGGGAG.GCGGGGTTACACGTG.CGGGCGGGGATGGGGGCCCCGGGCGGGGGGGGTgggg > 1:1844650/1‑99 (MQ=255)
gacaaggggCAACAGGGGGGGTTGGTGGCTCGCCCGGGGCGGGGGGGAG.CCGTGATTACACGTG.CGGGCGGTGATGGGAGCCCAGTGCGTGGGCGATGgag < 2:327641/95‑1 (MQ=255)
cgaTGGGCAACAGGGGGGCTTTGTGGCTCGCCCCCAGCGGGGGCGAG.CCGTGATTACACGTG.CGGGCGGGGATGGGGGCCCAGTGAGGGGGCGATgggggg > 2:1965683/1‑97 (MQ=255)
cgaTGGGCAACAGGGGGGCTTTGTGGCTCCCCCCCAGCGGGGGGGGG.CCGGGGTTAAACCTG.CGGGCGGGGGTGGGGGGCCCGTGCGGGGGGGATGGggag > 1:3461111/1‑101 (MQ=255)
tGGGCAACAGGGGGGCTTTGTGGCTCGCCCCGAGCGGGGGGGGG.CCGTGATTACACGTG.CGGGCGGGGATGGGAGCCCCGTGCGGGGGGGGTGGAGAGCCg > 2:42038/1‑101 (MQ=255)
gCAACAGGGGGGCTTTGTGGCTCGCCCCCAGCGGGGGCGAG.CCGGGATTACACGTG.CGGGCGGGGGTGGGAGGCCAGGGCGTGGGCGATGGAGGGCCgtgg > 1:299589/1‑100 (MQ=255)
cAACAGGGGGGCTTTGTGGCTCCCCCCGAGCGGGGGCGAG.CCGTGATTAAACGTG.CGGGCGGTGATGGGAGCCCAGTGCGTGGGCGATGGGGAGCCGtgtg > 2:2832253/1‑101 (MQ=255)
aaCAGGGGGGCTTTGTGGCTCGCCCCCAGCGGGGGCGAG.CCGGGATTACACGTG.CGGGCGGGGATGGGAGCCCAGTGCGTGGGCGATGGGGGGCCGTGTgg > 2:4857271/1‑101 (MQ=255)
cggggggtCTTTGTGGCGCGCCCCGAGCGGGGGGGAG.CCGTGATTACACGTG.CGGGCGGTGATGGGAGCCCAGTGCGTGGGCGATGGAGAGCCGTGTGGAg < 2:1165483/99‑1 (MQ=255)
cgggggggTTTTGTGGCTCCCCCCGAGGGGGGGCGAG.CCGTGATTACACGTG.CGGGCGGTGATGGGAGCCCAGTGCGTGGGCGATGGAGAGCCGTGTGGAg < 2:3648217/99‑1 (MQ=255)
gggggggTTTTGTGGCTCGCCCCGGGGGGGGGCGAG.CCGTGATTACACGTG.CGGGCGGTGATGGGAGCCCAGTGCGTGGGCGATGGAGAGCCGTGTGGAGc < 1:2085286/100‑1 (MQ=255)
aGGGGGGCTTTGTGGCTCGCCCCGAGGGGGGGCGAG.GCGGGATTACACGTG.GGGGGGGGGATGGGAGCCCAGTGCGCGGGCGGTGGGGGGCCGTGGggggg > 2:584932/1‑98 (MQ=255)
ggggggCTTTGTGGCTCGCCCCCAGCGGGGGGGAG.CCGGGGTTACACGGG.CGGGCGGGGATGGGGGGCCCGTGCGTGGGGGAGGGGGAGCCGGGTgggggc > 2:4426564/1‑97 (MQ=255)
gggggCTTTGTGGCTCGCCCCGAGCGGGGGCGAG.CCGGGATTACACGTG.CGGGCGGTGATGGGAGCCCAGTGCGTGGGCGATGGAGAGCCGTGTGGAGCAt > 2:2166168/1‑101 (MQ=255)
ggggTTTTGTGGCCCGCCCCGGGCGGGGGCGAG.CCGTGATTACACGTG.CGGGCGGTGATGGGAGCCCAGTGCGTGGGCGATGGAGAGCCGTGTGGAGCATg < 1:1896991/101‑1 (MQ=255)
gggtttgggggCCCGCCCCGGGGGGGGGGGAG.CCGTGATTACACGTG.CGGGCGGTGATGGGAGCCCAGTGCGTGGGCGATGGAGTGCCGTGTGGAGCATGa < 1:4413992/92‑1 (MQ=255)
gttttGTGCCTCCCCCGGGGCGGGGGCGAG.CCGTGATTACACGTG.CGGGCGGTGATGGGAGCCCAGTGCGTGGGCGATGGAGAGCCGTGTGGAGCATGAcc < 2:133934/99‑1 (MQ=255)
ttttGTGGCCCGCCCCGGGCGGGGGCGAG.CCGTGATTACACGTG.CGGGCGGTGATGGGAGCCCAGTGCGTGGGCGATGGAGAGCCGTGTGGAGCATGAccc < 2:1420039/100‑1 (MQ=255)
ttttGGGGCTCGCCCGGGGCGGGGGGGAG.CCGTGATTACACGTG.CGGGCGGTGATGGGAGCCCAGTGCGTGGGCGATGGAGAGCCGTGTGGAGCATGAccc < 1:3929719/100‑1 (MQ=255)
tttGTGGCTCGCCCGGGGGGGGGGGGAG.CCGTGATTACACGTG.CGGGCGGTGATGGGAGCCCAGTGCGTGGGCGATGGAGAGCCGTGTGGAGCATGACccg < 2:4401258/101‑1 (MQ=255)
ttGTGGCTCGCCCCGAGCGGGGGCGAG.CCGGGGTTACACGTG.CGGGCGGGGATGGGAGCCCAGTGCGTGGGCGGTGGAGAGCCGTGGGGGGGATGACccgc > 1:1440765/1‑101 (MQ=255)
gttctccGCCCCGGGGGGGGGGGAG.CCGTGATTACACGTG.CGGGCGGTGATGGGAGCCCAGTGCGTGGGCGATGGAGAGCCGTGTGGAGCATGACccgccg < 2:3431047/95‑1 (MQ=255)
gtgGCTCGCCCCGAGCGGGGGCGAG.CCGTGATTACACGTG.CGGGCGGGGATGGGAGCCCAGTGCGTGGGCGATGGAGAGCCGGGTGGAGCATGACccgccg > 1:1635217/1‑101 (MQ=255)
tgGCTCGCCCCGAGCGGGGGCGAG.CCGTGATTACACGTG.CGGGCGGTGATGGGAGCCCAGTGCGTGGGCGATGGAGAGCCGTGTGGAGCATGACCCGCCGa > 1:4902279/1‑101 (MQ=255)
gggCCCGCCCGGAGGGGGGGGGAG.CCGTGATTACACGTG.CGGGCGGTGATGGGAGCCCAGTGCGTGGGCGATGGAGAGCCGTGTGGAGCATGACCCGCCGa < 2:5011629/100‑1 (MQ=255)
ggCTCGCCCCGAGCGGGGGCGAG.CCGTGATTACACGTG.CGGGCGGTGATGGGAGCCCAGTGCGTGGGCGATGGAGAGCCGTGTGGAGCATGACCCGCCGaa > 2:766891/1‑101 (MQ=255)
cgcGCCCCGAGCGGGGGCGAG.CCGTGATTACACGTG.CGGGCGGTGATGGGAGCCCAGTGCGTGGGCGATGGAGAGCCGTGTGGAGCATGACCCGCCGAaga < 1:3924906/99‑1 (MQ=255)
cTCGCCCCGAGCGGGGGCGAG.CCGTGATTACACGTG.CGGGCGGTGATGGGAGCCCAGTGCGTGGGCGATGGAGAGCCGTGTGGAGCATGACCCGCCGAaga > 2:4248451/1‑101 (MQ=255)
cccccgGAGGGGGGGGGAG.CCGTGATTACACGTG.CGGGCGGTGATGGGAGCCCAGTGCGTGGGCGATGGAGAGCCGTGTGGAGCATGACCCGCCGAAGAgc < 2:2033058/99‑1 (MQ=255)
cGCCCGGGGGGGGGGCGAG.CCGTGATTACACGTG.CGGGCGGTGATGGGAGCCCAGTGCGTGGGCGATGGAGAGCCGTGTGGAGCATGACCCGCCGAAGAgc < 2:3627587/101‑1 (MQ=255)
cGCCCCGAGCGGGGGCGAG.CCGTGATTACACGTG.CGGGCGGTGATGGGAGCCCAGTGCGTGGGCGATGGAGAGCCGTGTGGAGCATGACCCGCCGAAGAgc > 2:1686090/1‑101 (MQ=255)
ccccGGGGGGGGGGGGGCCCGTGATTACCCGTG.CGGGGGGTGATGGGAGCCCAGGGCGGGGGCGATGGGGAGCCGGGGGGGGCATGCCCCCCCAAAGAgcg < 2:2050729/101‑1 (MQ=255)
ccccGAGCGGGGGCGAG.CCGTGATTACACGTG.CGGGCGGTGATGGGAGCCCAGTGCGTGGGCGATGGAGAGCCGTGTGGAGCATGACCCGCCGAAGAgcgg > 2:4679044/1‑101 (MQ=255)
ccccGAGCGGGGGCGAG.CCGTGATTACACGTG.CGGGCGGTGATGGGAGCCCAGTGCGTGGGCGATGGAGAGCCGTGTGGAGCATGACCCGCCGAAGAgcgg > 1:638103/1‑101 (MQ=255)
cccGAGCGGGGGCGAG.CCGTGATTACACGTG.CGGGCGGTGATGGGAGCCCAGTGCGTGGGCGATGGAGAGCCGTGTGGAGCATGACCCGCCGAAGAgcggg > 2:1888171/1‑101 (MQ=255)
cGAGCGGGGGCGAG.CCGTGATTACACGTG.CGGGCGGTGATGGGAGCCCAGTGCGTGGGCGATGGAGAGCCGTGTGGAGCATGACCCGCCGAAGAgcgggcg > 2:4792106/1‑101 (MQ=255)
gggggggggGGAG.CCGTGATTACACGTG.CGGGCGGTGATGGGAGCCCAGTGCGTGGGCGATGGAGAGCCGTGTGGAGCATGACCCGCCGAAGAgcgggcgg < 1:484149/97‑1 (MQ=255)
aGCGGGGGCGAG.CCGTGATTACACGTG.CGGGCGGTGATGGGAGCCCAGTGCGTGGGCGATGGAGAGCCGTGTGGAGCATGACGCGCCGAAGAGCGggcggc > 2:436394/1‑101 (MQ=255)
ggggCGAG.CCGTGATTACACGTG.CGGGCGGTGATGGGAGCCCAGTGCGTGGGCGATGGAGAGCCGTGTGGAGCATGACCCGCCGAAGAGCGGGCGGCTGCa > 2:538695/1‑101 (MQ=255)
gggGGAG.CCGTGATTACACGTG.CGGGCGGTGATGGGAGCCCAGTGCGTGGGCGATGGAGAGCCGTGTGGAGCATGACCCGCCGAAGAGCGGGCGGCTGCAg < 1:1229292/101‑1 (MQ=255)
|
TGATGGGCGCGCAGCAGGTAGCCTTCCGCGCATCGAATCCCGCCTGCTACCTCTCGACGATGGGCAACAGGGGGGCTTTGTGGCTCGCCCCGAGCGGGGGCGAG.CCGTGATTACACGTG.CGGGCGGTGATGGGAGCCCAGTGCGTGGGCGATGGAGAGCCGTGTGGAGCATGACCCGCCGAAGAGCGGGCGGCTGCAGCCA > NC_014034/1329089‑1329289
Base quality scores:
ATCG
< 3 ≤
ATCG
< 12 ≤
ATCG
< 23 ≤
ATCG
< 33 ≤
ATCG
< 41 ≤
ATCG
|