| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 1,395,554 | A→G | 20.7% | intergenic (+366/‑565) | RCAP_rcc01306 → / → RCAP_rcc01307 | Cas2 family CRISPR‑associated protein/hypothetical protein |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 1,395,554 | 0 | A→G | 20.7% | 143.8 ‑1.7 ‑0.6 | 357 | intergenic (+366/‑565) | RCAP_rcc01306/RCAP_rcc01307 | Cas2 family CRISPR‑associated protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): new base (21/36): ref base (122/138): total (157/200) | ||||||||||
| Fisher's exact test strand distribution p-value = 1.87e-01 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 2.34e-01 | ||||||||||
Only 100 of 375 total aligned reads displayed.
GTGGATCGAAACATCGCCGCTTTGGCGGTCGACAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTCGGTGCCGTCGCTCG.TCCAGC.CGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGT > NC_014034/1395454‑1395654
|
tGGATCGAAACATCGCCGCTTTGGCGGTCGACAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTCGGTGCCGTCGCTCG.TCCAg < 2:3637813/101‑1 (MQ=255)
ggATCGAAACATCGCCGCTTTGGCGGTCGACAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTCGGTGCCGTCGCTCG.TCCAGc > 2:2635514/1‑101 (MQ=255)
ggATCGAAACATCGCCGCTTTGGCGGTCGACAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTCGGTGCCGTCGCTCG.TCCAGc > 2:4170855/1‑101 (MQ=255)
cGAAACATCGCCGCTTTGGCGGTCGACAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTCGGTGGCGTCGCTCG.TCCAGC.CGG.c > 2:1765393/1‑101 (MQ=255)
cGAAACATCGCCGCTTTGGCGGTCGACAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTCGGTGCCGTCGCTCG.TCCAGC.CCG.c > 2:2974136/1‑101 (MQ=255)
gAAACATCGCCGCTTTGGCGGTCGACAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTCGGTGCCGTCGCTCG.TCCAGC.CGG.cc > 2:3227081/1‑101 (MQ=255)
gAAACATCGCCGCTTTGGCGGTCGACAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTCGGTGCCGTCGCTCG.TCCAGC.CGG.cc > 2:2132770/1‑101 (MQ=255)
aaaCATCGCCGCTTTGGCGGTCGACAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTCGGTGCCGTCGCTCG.TCCAGC.CGG.CCt > 2:151340/1‑101 (MQ=255)
cATCGCCGCTTTGGCGGTCGACAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTCGGTGCCGTCGCTCG.TCCAGC.CGG.CCT.GCt > 2:1498374/1‑101 (MQ=255)
cTTTGGCGGTCGACAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTCGGTGCCGTCGCTCG.TCCAGC.CGG.CCT.GCTCGTCGCTc > 1:2256477/1‑101 (MQ=255)
gCGGTCGACAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTCGGTGCCGTCGCTCG.TCCAGC.CGG.CCT.GCTCGTCGCTcccccc < 2:581116/101‑1 (MQ=255)
ggTCGACAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTCGGTGCCGTCGCTCG.TCCAGC.CGG.CCT.GCTCGTCGCTCCCCCcgc > 1:4887453/1‑101 (MQ=255)
cGACAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTCGGTGCCGTCGCTCG.TCCAGC.CGG.CCT.GCTCGTCGCTCCCCCCGCggg < 2:34000/101‑1 (MQ=255)
cAGGCTGGTAACGTGTCGCCCCCCCCGCGGGGGCGTGGATCGAAACATCTCGGTGCCGTCGCTCG.TCCAGC.CGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGc < 1:3597768/101‑1 (MQ=255)
agcggctgcggtCGCCCCCCCCGCGGGGGCGTGGATCGAAACAAAAAGCCGCCGACAAACGCGGCAAC.CGG.CCC.G.GCGTCGCTCCCCCCGCGGGGGCGTgg < 1:3526510/91‑1 (MQ=0)
tGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTCGGTGCCGTCGCTCG.TCCAGC.CGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGa < 2:2372520/101‑1 (MQ=255)
gcggctgcggtCGCTCCCCCCGCGGGGGCGTGGATCGAAACAAAAAGCCGCCGACAAACGCGGCACC.CGG.CCC.G.GCGTCGCTCCCCCCGCGGGGGCGTGGa < 2:1661797/92‑1 (MQ=0)
gcggctgcggtCGCTCCCCCCGCGGGGGCGTGGATCGAAACAAAAAGCCGCCGACAAACGCGGCAAC.CGG.CCC.G.GCGTCGCTCCCCCCGCGGGGGCGTGGa < 2:1302225/92‑1 (MQ=0)
aggccggtggtCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.CCCGGCGCCGCAGCGAG.TGCGTC.TGGAACA.GGATGTCGCTCCCCCCGCGGGGGCGTGGa > 1:2083580/10‑101 (MQ=0)
gccggtggtCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.CCCGGCGCCGCAGCGAG.TGCGTC.TGGAACA.GGATGTCGCTCCCCCCGCGGGGGCGTGGATc < 1:1988851/94‑1 (MQ=2)
gTAACGTTTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTCGGTGCCGTCGCTCG.TCCAGC.CGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATc > 2:2247891/1‑101 (MQ=255)
gTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTCGGTGCCGTCGCTCG.TCCAGC.CGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATc < 2:3891191/101‑1 (MQ=255)
ctcgcacgtCGCTCCCCCCGCGGGGGCGTGGATCGAAACAATGCGGCGCGGGC.CTAT.GGCTGA.CGGACCC.GCCCGTCGCTCCCCCCGCGGGGGCGTGGATc < 1:1558154/94‑1 (MQ=2)
tcgcccgtCGCTCCCCCCGCGGGGGCGTGGATCGAAACAATGCGGCGCGGGC.CTAT.GGCTGA.CGGACCC.GCCCGTCGCTCCCCCCGCGGGGGCGTGGATCg < 1:2141665/95‑1 (MQ=2)
tcgcacgtCGCTCCCCCCGCGGGGGCGTGGATCGAAACAATGCGGCGCGGGC.CTAT.GGCTGA.CGGACCC.GCCCGTCGCTCCCCCCGCGGGGGCGTGGATCg > 2:2841841/7‑101 (MQ=2)
tAACGTGTCGCTCCCCCCGCGGGGGCGGGGATCGAAACATCTCGGTGCCGTCGCTCG.TCCAGC.CGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCg > 2:3358588/1‑101 (MQ=255)
ccggtggtCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.CCCGGCGCCGCAGCGAG.TGCGTC.TGGAACA.GGATGTCGCTCCCCCCGCGGGGGCGTGGATCg < 1:3778561/95‑1 (MQ=2)
ccggtggtCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.CCCGGCGCCGCAGCGAG.TGCGTC.TGGAACA.GGATGTCGCTCCCCCCGCGGGGGCGTGGATCg < 1:4752711/95‑1 (MQ=2)
cgcacgtCGCTCCCCCCGCGGGGGCGTGGATCGAAACAATGCGGCGCGGGC.CTAT.GGCTGA.CGGACCC.GCCCGTCGCTCCCCCCGCGGGGGCGTGGCTCGa > 1:2880496/6‑101 (MQ=2)
ggtggtCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.CCCGGGGCCGCAGCGAG.TGCGTC.TGGAACA.GGATGTCGCTCCCCCCGCGGGGGCGTGGATCGaa > 2:1945034/5‑101 (MQ=2)
gcacgtCGCTCCCCCCGCGGGGGCGTGGATCGAAACAATGCGGCGCGGGC.CTAT.GGCTGA.CGGACCC.GCCCGTCGCTCCCCCCGCGGGGGCGTGGATCGaa < 1:3695411/97‑1 (MQ=2)
aCGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTCGGTGCCGTCGCTCG.TCCAGC.CGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGaa < 1:2293623/101‑1 (MQ=255)
cgcgtCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCGATGATCAAATCCGCA.ATCGGC.CGG.GCTCGATCGTCGCTCCCCCCGCGGGGGCGTGGATCGaa < 2:4565951/98‑1 (MQ=2)
cgcgtCGCCCCCCCCGGGGGGGCGTGGATCGAAACACCCCGAACCTGTCG.GCG.GCGAACACCG.ATA.CCGCGTCGCTCCCCCCGCGGGGGCGTGGATCGaaa < 1:2752067/98‑1 (MQ=2)
tggtCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.CCCGGCGCCGCAGCGAG.TGCGTC.TGGAACA.GGATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAac < 1:3168975/99‑1 (MQ=2)
tggtCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.CCCGGCGCCGCAGCGAG.TGCGTC.TGGAACA.GGATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAac < 2:2170493/99‑1 (MQ=2)
gtgtCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTCGGTGCCGTCGCTCG.TCCAGC.CGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGGGGGTCGAAac > 1:895680/1‑101 (MQ=255)
tgtCGCTCCCCCCGCAGGGGCGTGGATCGAAACATCTCGGTGCCGTCGCTCG.TCCAGC.CGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAacc > 1:3362778/1‑101 (MQ=255)
ggtCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.CCCGGCGCCGCAGCGAG.TGCGTC.TGGAACA.GGATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAact < 1:3451392/100‑2 (MQ=2)
cgtCGCTCCCCCCGCGGGGGCGTGGATCGAAGCAATGCGGCGCGGGC.CTAT.GGCTGC.CGGACCC.GCCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAact < 1:1650046/100‑2 (MQ=2)
cgtCGCTCCCCCCGCGGGGGCGTGGATCGAAACAATGCGGCGCGGGC.CTAT.GGCTGA.CGGACCC.GCCCGTCGCTCCCCCCCCGGGGGCGTGGATCGaaaat > 1:4809832/2‑99 (MQ=2)
gtCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTCGGTGCCGTCGCTCG.TCCAGC.CGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAaccc > 2:3067843/1‑100 (MQ=255)
gtCGCTCCCCCCGCGGGGGCGTGGATCGAAACAATGCGGCGCGGGC.CTAT.GGCTGA.CGGACCC.GCCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAactg > 1:4009300/1‑99 (MQ=2)
gtCGCTCCCCCCGCGGGGGCGTGGATCGAAACAAAAAGCCGCCGACAAACGCGGCAAC.CGG.CCC.G.GCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAaccc < 2:3134417/101‑2 (MQ=2)
tCGCTCCGCCCGCGGGGGCGTGGATCGAAAC.TCCCGGCGCCGCAGCGAG.TGCGTC.TGGAACA.GGATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAactat < 2:4508980/101‑4 (MQ=2)
tCGCTCCCCCCGCGGGGGCGTGGATCGAAACAATGCGGCGCGGGC.CTAT.GGCTGA.CGGACCC.GCCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAactgc < 1:5053765/101‑4 (MQ=2)
tCGCTCCCCCCGCGGGGGCGTGGATCGAAACAAAAAGCCGCCGACAAACGCGGCAAC.CGG.CCC.G.GCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAacccc < 1:2411224/101‑3 (MQ=2)
cGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTCGGTGCCGTCGCTCG.TCCAGC.CGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAaccacc < 2:5031607/101‑1 (MQ=255)
gccccccccGCGGGGGCGTGGATCGAAACAATGCGGCGCGGGC.CTAT.GGCTGA.CGGACCC.GCCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAactgcgt < 1:4462868/98‑6 (MQ=2)
gCTCCCCCCGCGGGGGCGTGGATCGAAACAAAAAGCCGCCGACAAACGCGGCAAC.CGG.CCC.G.GCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAaccccgc < 1:3928218/101‑5 (MQ=2)
gCTCCCCCCGCGGGGGCGTGGATCGAAACA.CCCGGCGCCGCAGCGAG.TGCGTC.TGGAACA.GGATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAactatgc > 2:2400946/1‑96 (MQ=2)
cTCCCCCCGCGGGGGCGTGGATCGAAACATCTCGGTGCCGTCGCTCG.TCCAGC.CGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGGGGATCGAAACCACCtt > 1:1927380/1‑101 (MQ=255)
cTCCCCCCGCGGGGGCGTGGATCGAAACAAAAAGCCGCCGACAAACGCGGCAAC.CGG.CCC.G.GCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAaccccgcg > 1:640531/1‑96 (MQ=2)
tCCCCCCGCGGGGGCGTGGATCGAAACATCTCGGTGCCGTCGCTCG.TCCAGC.CGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTg < 1:2974364/101‑1 (MQ=255)
tCCCCCCGCGGGGGCGTGGATCGAAACA.CCCGGCGCCGCAGCGAG.TGCGTC.TGGAACA.GGATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAactatgctg > 1:1176760/1‑94 (MQ=2)
tCCCCCCGCGGGGGCGTGGATCGAAACA.CCCGGCGCCGCAGCGAG.TGCGTC.TGGAACA.GGATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAactatgctg > 1:4601225/1‑94 (MQ=2)
tCCCCCCGCGGGGGCGTGGATCGAAACA.CCCGGCGCCGCAGCGAG.TGCGTC.TGGAACA.GGATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAactatgctg > 1:3270682/1‑94 (MQ=2)
cccccccGCGGGGGCGTGGATCGAAACAATGCGGCGCGGGC.CTAT.GGCTGA.CGGACCC.GCCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAactgcgtgc < 1:3062797/100‑8 (MQ=2)
ccccccGCGGGGGCGTGGATCGAAACAATGCGGCGCGGGC.CTAT.GGCTGA.CGGACCC.GCCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAactgcgtgcg < 1:1300738/101‑9 (MQ=2)
ccccccGCGGGGGCGTGGATCGAAACAAAAAGCCGCCGACAAACGCGGCAAC.CGG.CCC.G.GCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAaccccgcggc > 1:780972/1‑94 (MQ=2)
ccccccGCGGGGGCGTGGATCGAAACAAAAAGCCGCCGACAAACGCGGCAAC.CGG.CCC.G.GCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAaccccgcggc > 2:4398618/1‑94 (MQ=2)
ccccccGCGGGGGCGTGGATCGAAACA.CCCGGCGCCGCAGCGAG.TGCGTC.TGGAACA.GGATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAactatgctgg < 2:4805210/101‑9 (MQ=2)
ccccccGCGGGGGCGTGGATCGAAACA.CCCGGCGCCGCAGCGAG.TGCGTC.TGGAACA.GGATGTCGCTCCCCCCGCGGGGGCGGGGATCGAAactatgctgg > 1:4546155/1‑93 (MQ=2)
cccccGCGGGGGCGTGGATCGAAACATCTCGGTGCCGTCGCTCG.TCCAGC.CGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCg > 2:1718024/1‑101 (MQ=255)
ccccGCGGGGGCGTGGATCGAAACATCTCGGTGCCGTCGCTCG.TCCAGC.CGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCgg < 1:4061078/101‑1 (MQ=255)
ccccGCGGGGGCGTGGATCGAAACAATGCGGCGCGGGC.CTAT.GGCTGA.CGGACCC.GCCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAactgcgtgcgcg < 2:2661674/101‑11 (MQ=2)
ccccGCGGGGGCGTGGATCGAAACAAAAAGCCGCCGACAAACGCGGCAAC.CGG.CCC.G.GCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAaccccgcggcgt > 1:2193081/1‑92 (MQ=2)
ccccGCGGGGGCGTGGATCGAAACA.CCCGGCGCCGCAGCGAG.TGCGTC.TGGAACA.GGATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAactatgctggct < 2:1590595/101‑11 (MQ=2)
ccccGCGGGGGCGTGGATCGAAACA.CCCGGCGCCGCAGCGAG.TGCGTC.TGGAACA.GGATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAactatgctggct > 1:3863349/1‑91 (MQ=2)
cccGCGGGGGCGTGGATCGAAACAAAAAGCCGCCGACAAACGCGGCAAC.CGG.CCC.G.GCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAaccccgcggcgtc < 1:432345/101‑11 (MQ=2)
cccGCGGGGGCGTGGATCGAAACAAAAAGCCGCCGACAAACGCGGCAAC.CGG.CCC.G.GCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAaccccgcggcgtc < 2:3830578/101‑11 (MQ=2)
ccGCGGGGGCGTGGATCGAAACATCTCGGTGCCGTCGCTCG.TCCAGC.CGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGAt > 2:2499368/1‑101 (MQ=255)
gcgGGGGCGTGGATCGAAACATCTCGGTGCCGTCGCTCG.TCCAGC.CGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTg < 1:4928471/101‑1 (MQ=255)
cgGGGGCGTGGATCGAAACATCTCGGTGCCGTCGCTCG.TCCAGC.CGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGt < 2:1091778/101‑1 (MQ=255)
gggggCGTGGATCGAAACATCTCGGTGCCGTCGCTCG.TCCAGC.CGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCCCCTGCGGATTGtg > 2:2080098/1‑100 (MQ=255)
gggggCGTGGATCGAAACATCTCGGTGCCGTCGCTCG.TCCAGC.CGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTc < 1:1751482/101‑1 (MQ=255)
gggggCGTGGATCGAAACATCTCGGTGCCGTCGCTCG.TCCAGC.CGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTc < 2:3969180/101‑1 (MQ=255)
gCGTGGATCGAAACATCTCGGTGCCGTCGCTCG.TCCAGC.CGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACtt < 1:980981/101‑1 (MQ=255)
cGTGGATCGAAACATCTCGGTGCCGTCGCTCG.TCCAGC.CGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACttt < 1:1018856/101‑1 (MQ=255)
cGTGGATCAAAACATCTCGGTGCCGTCGCTCG.TCCAGC.CGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACttt < 1:1507009/101‑1 (MQ=255)
gTGGATCGAAACATCTCGGTGCCGTCGCTCG.TCCAGC.CGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACTTTc > 1:587675/1‑101 (MQ=255)
gTGGATCGAAACATCTCGGTGCCGTCGCTCG.TCCAGC.CGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACTTTc < 1:1693341/101‑1 (MQ=255)
gAAACATCTCGGTGCCGTCGCTCG.TCCAGC.CGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGc > 2:2733277/1‑101 (MQ=255)
aaaCATCTCGGTGCCGTCGCTCG.TCCAGC.CGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCg < 1:4215267/101‑1 (MQ=255)
aTCTCGGTGCCGTCGCTCG.TCCAGC.CGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGc < 2:4972297/101‑1 (MQ=255)
tctcGGTGCCGTCGCTCG.TCCAGC.CGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAggg > 2:2998641/1‑99 (MQ=255)
tcGGTGCCGTCGCTCG.TCCAGC.CGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTc < 1:183163/101‑1 (MQ=255)
cGGTGCCGTCGCTCG.TCCAGC.CGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCg < 1:4176050/101‑1 (MQ=255)
cGGTGCCGTCGCTCG.TCCAGC.CGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCg > 2:444413/1‑101 (MQ=255)
gTGCCGTCGCTCG.TCCAGC.CGG.CCT.TCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCt < 2:902090/101‑1 (MQ=255)
gTGCCGTCGCGCG.TCCAGC.CGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGCGGCGAGGCGTCGCt > 1:4363089/1‑101 (MQ=255)
gCCGTCGCTCG.TCCAGC.CGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTcc < 1:1533391/101‑1 (MQ=255)
gCCGTCGCTCG.TCCAGC.CGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTcc > 2:3567174/1‑101 (MQ=255)
gTCGCTCG.TCCAGC.CGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTccccc > 2:3762553/1‑101 (MQ=255)
tCGCTCG.TCCAGC.CGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTcccccc < 2:4214012/101‑1 (MQ=255)
tCGCTCG.TCCAGC.CGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTcccccc < 2:684100/101‑1 (MQ=255)
cGCTCG.CCCAGC.CGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCcg < 2:1832669/101‑1 (MQ=255)
cG.TCCAGC.CGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCAATTTCGCGGGGCGAAGCGTCCCTCCCCCCGCggg > 1:253881/1‑101 (MQ=255)
g.TCCAGC.CGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCgggg < 1:4444244/101‑1 (MQ=255)
ccAGC.CGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGc < 1:1074913/101‑1 (MQ=255)
|
GTGGATCGAAACATCGCCGCTTTGGCGGTCGACAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTCGGTGCCGTCGCTCG.TCCAGC.CGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGT > NC_014034/1395454‑1395654
Base quality scores:
ATCG
< 3 ≤
ATCG
< 18 ≤
ATCG
< 25 ≤
ATCG
< 33 ≤
ATCG
< 39 ≤
ATCG
|