| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 1,395,562 | T→C | 25.1% | intergenic (+374/‑557) | RCAP_rcc01306 → / → RCAP_rcc01307 | Cas2 family CRISPR‑associated protein/hypothetical protein |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 1,395,562 | 0 | T→C | 25.1% | 180.4 ‑2.1 ‑0.6 | 366 | intergenic (+374/‑557) | RCAP_rcc01306/RCAP_rcc01307 | Cas2 family CRISPR‑associated protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): new base (23/45): ref base (108/135): total (152/214) | ||||||||||
| Fisher's exact test strand distribution p-value = 1.28e-01 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 2.73e-01 | ||||||||||
Only 100 of 382 total aligned reads displayed.
AAACATCGCCGCTTTGGCGGTCGACAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTCGGTGCCGTCGCTCG.TCCAGC.CGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCG > NC_014034/1395462‑1395660
|
cATCGCCGCTTTGGCGGTCGACAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTCGGTGCCGTCGCTCG.TCCAGC.CGG.CCT.GCt < 1:3444660/101‑1 (MQ=255)
cATCGCCGCTTTGGCGGTCGACAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTCGGTGCCGTCGCTCG.TCCAGC.CGG.CCT.GCt > 2:2980976/1‑101 (MQ=255)
aTCGCCGCTTTGGCGGTCGACAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTCGGTGCCGTCGCTCG.TCCAGC.CGG.CCT.GCtc < 1:4107146/101‑1 (MQ=255)
cgccgcTTTGGCGGTCGACAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTCGGTGCCGTCGCTCG.TCCAGC.CGG.CCT.GCtcgt > 2:336874/1‑101 (MQ=255)
gccgcTTTGGCGGTCGACAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTCGGTGCCGTCGCTCG.TCCAGC.CGG.CCT.GCtcgtc < 2:1739649/101‑1 (MQ=255)
cgcTTTGGCGGTCCACAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATTGAAACATCTCGGTGCCGTCGCTCG.TCCAGC.CGG.CCT.GCTCGTCGc < 1:1554760/101‑1 (MQ=255)
cTTTGGCGGTCGACAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTCGGTGCCGTCGCTCG.TCCAGC.CGG.CCT.GCTCGTCGCTc > 1:2256477/1‑101 (MQ=255)
ttGGCGGTCGACAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTCGGTGCCGTCGCTCG.TCCAGC.CGG.CCT.GCTCGTCGCTccc > 2:2302729/1‑101 (MQ=255)
ttGGCGGTCGACAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTCGGTGCCGTCGCTCG.TCCAGC.CGG.CCT.GCTCGTCGCTccc > 2:2384027/1‑101 (MQ=255)
ggCGGTCGACAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTCGGTGCCGTCGCTCG.TCCAGC.CGG.CCT.GCTCGTCGCTccccc > 2:4185892/1‑101 (MQ=255)
gtgtggataGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTCGGTGCCGTCGCTCG.TCCAGC.CGG.CCT.GCTCGTCGCTCCCCCcg < 2:401108/93‑1 (MQ=255)
ggTCGACAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTCGGTGCCGTCGCTCG.TCCAGC.CGG.CCT.GCTCGTCGCTCCCCCcgc > 1:4887453/1‑101 (MQ=255)
cGACAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTCGGTGCCGTCGCTCG.TCCAGC.CGG.CCT.GCTCGTCGCTCCCCCCGCggg > 2:2620783/1‑101 (MQ=255)
aCAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTCGGTGCCGTCGCTCG.TCCAGC.CGG.CCT.GCTCGTCGCTCCCCCCGCggggg > 1:351413/1‑101 (MQ=255)
cAGGCTGGTAACGTGTCGCCCCCCCCGCGGGGGCGTGGATCGAAACATCTCGGTGCCGTCGCTCG.TCCAGC.CGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGc < 1:3597768/101‑1 (MQ=255)
gCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTCGGTGCCGTCGCTCG.TCCAGC.CGG.CCT.GCTCGTCGCCCCCCCCCCGGGGGCggg > 2:2161716/1‑99 (MQ=255)
cTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTCGGTGCCGTCGCTCG.TCCAGC.CGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTgg > 1:4234010/1‑101 (MQ=255)
ggccggtggtCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.CCCGGCGCCGCAGCGAG.TGCGTC.TGGAACA.GGATGTCGCTCCCCCCGCGGGGGCGTGGAt < 1:28874/93‑1 (MQ=2)
ggTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTCGGTGCCGTCGCTCG.TCCAGC.CGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGAt > 1:2300646/1‑101 (MQ=255)
ggTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTCGGTGCCGTCGCTCG.TCCAGC.CGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGAt < 1:4017875/101‑1 (MQ=255)
ggTAACGTGTCGCCCCCCCCGCGGGGGCGTGGATCGAAACATCTCGGTGCCGTCGCTCG.TCCAGC.CGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGAt < 1:1795421/101‑1 (MQ=255)
gccggtggtCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.CCCGGCGCCGCAGCGAG.TGCGTC.TGGAACA.GGATGTCGCTCCCCCCGCGGGGGCGTGGATc < 1:1988851/94‑1 (MQ=2)
gTAACGTGTCGCTCCCCCCGCGGGGGCGTGTATCGAAACATCTCGGTGCCGTCGCTCG.TCCAGC.CGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATc < 1:1676331/101‑1 (MQ=255)
gTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTCGGTGCCGTCGCTCG.TCCAGC.CGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATc > 1:2212397/1‑101 (MQ=255)
gTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTCGGTGCCGTCGCTCG.TCCAGC.CGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATc < 2:1671381/101‑1 (MQ=255)
ctcgcacgtCGCTCCCCCCGCGGGGGCGTGGATCGAAACAATGCGGCGCGGGC.CTAT.GGCTGA.CGGACCC.GCCCGTCGCTCCCCCCGCGGGGGCGTGGATc < 1:1714703/94‑1 (MQ=2)
tcgcacgtCGCTCCCCCCGCGGGGGCGTGGATCGAAACAATGCGGCGCGGGC.CTAT.GGCTGA.CGGACCC.GCCCGTCGCTCCCCCCGCGGGGGCGTGGATCg > 2:2841841/7‑101 (MQ=2)
tAACGTGTCGCCCCCCCCGCGGGGGCGTGGATCGAAACATCTCGGTGCCGTCGCTCG.TCCAGC.CGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCg < 2:5693/101‑1 (MQ=255)
ccggtggtCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.CCCGGCGCCGCAGCGAG.TGCGTC.TGGAACA.GGATGTCGCTCCCCCCGCGGGGGCGTGGATCg < 1:4752711/95‑1 (MQ=2)
ccggtggtCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.CCCGGCGCCGCAGCGAG.TGCGTC.TGGAACA.GGATGTCGCTCCCCCCGCGGGGGCGTGGATCg > 1:4553690/7‑101 (MQ=2)
aaCGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTCGGTGCCGTCGCTCG.TCCAGC.CGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGa > 1:3977120/1‑101 (MQ=255)
aaCGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTCGGTGCCGTCGCTCG.TCCAGC.CGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGGGGATcaa > 2:2212785/1‑99 (MQ=255)
gcacgtCGCTCCCCCCGCGGGGGCGTGGATCGAAACAATGCGGCGCGGGC.CTAT.GGCTGA.CGGACCC.GCCCGTCGCTCCCCCCGCGGGGGCGTGGATCGaa < 1:3695411/97‑1 (MQ=2)
aCGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTCGGTGCCGTCGCTCG.TCCAGC.CGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGaa > 1:433048/1‑101 (MQ=255)
cgcgtCGCCCCCCCCGGGGGGGCGTGGATCGAAACACCCCGAACCTGTCG.GCG.GCGAACACCG.ATA.CCGCGTCGCTCCCCCCGCGGGGGCGTGGATCGaaa < 1:2752067/98‑1 (MQ=2)
tggtCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.CCCGGCGCCGCAGCGAG.TGCGTC.TGGAACA.GGATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAac < 1:3168975/99‑1 (MQ=2)
tggtCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.CCCGGCGCCGCAGCGAG.TGCGTC.TGGAACA.GGATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAac < 1:3772024/99‑1 (MQ=2)
tggtCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.CCCGGCGCCGCAGCGAG.TGCGTC.TGGAACA.GGATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAac < 2:1546071/99‑1 (MQ=2)
cggtCGCTCCCCCCGCGGGGGCGTGGATCGAAACAAAAAGCCGCCGACAAACGCGGCAAC.CGG.CCC.G.GCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAac < 2:3173527/99‑1 (MQ=2)
tgtCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTCGGTGCCGTCGCTCG.TCCAGC.CGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAacc < 2:1931878/101‑1 (MQ=255)
tgtCGCTCCCCCCGCAGGGGCGTGGATCGAAACATCTCGGTGCCGTCGCTCG.TCCAGC.CGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAacc > 1:3362778/1‑101 (MQ=255)
cgtCGCTCCCCCCGCGGGGGCGTGGATCGAAACAATGCGGCGCGGGC.CTAT.GGCTGA.CGGACCC.GCCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAact < 2:3899138/100‑2 (MQ=2)
gtCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCGATGATCAAATCCGCA.ATCGGC.CGG.GCTCGATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAacg < 2:3020265/101‑2 (MQ=2)
tCGCTCCGCCCGCGGGGGCGTGGATCGAAAC.TCCCGGCGCCGCAGCGAG.TGCGTC.TGGAACA.GGATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAactat < 2:4508980/101‑4 (MQ=2)
tCGCTCCCCCCGCGGGGGCGTGGATCGAAACAATGCGGCGCGGGC.CTAT.GGCTGA.CGGACCC.GCCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAactgc < 1:5053765/101‑4 (MQ=2)
tCGCTCCCCCCGCGGGGGCGTGGATCGAAACAAAAAGCCGCCGACAAACGCGGCAAC.CGG.CCC.G.GCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAacccc < 1:4517310/101‑3 (MQ=2)
gCTCCCCCCGCGGGGGCGTGGATCGAAACA.CCCGGCGCCGCAGCGAG.TGCGTC.TGGAACA.GGATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAactatgc > 1:2141749/1‑96 (MQ=2)
cTCCCCCCGCGGGGGCGTGGATCGAAACATCTCGGTGCCGTCGCTCG.TCCAGC.CGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGGGGATCGAAACCACCtt > 1:1927380/1‑101 (MQ=255)
cTCCCCCCGCGGGGGCGTGGATCGAAACAAAAAGCCGCCGACAAACGCGGCAAC.CGG.CCC.G.GCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAaccccgcg > 1:640531/1‑96 (MQ=2)
cTCCCCCCGCGGGGGCGTGGATCGAAACA.CCCGGCGCCGCAGCGAG.TGCGTC.TGGAACA.GGATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAactatgct < 2:4982795/101‑7 (MQ=2)
tCCCCCCGCGGGGGCGTGGATCGAAACATCTCGGTGCCGTCGCTCG.TCCAGC.CGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTg < 1:2974364/101‑1 (MQ=255)
tCCCCCCGCGGGGGCGTGGATCGAAACA.CCCGGCGCCGCAGCGAG.TGCGTC.TGGAACA.GGATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAactatgctg > 1:4601225/1‑94 (MQ=2)
tCCCCCCGCGGGGGCGTGGATCGAAACA.CCCGGCGCCGCAGCGAG.TGCGTC.TGGAACA.GGATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAactatgctg < 1:2438192/101‑8 (MQ=2)
tCCCCCCGCGGGGGCGTGGATCGAAACA.CCCGGCGCCGCAGCGAG.TGCGTC.TGGAACA.GGATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAactatgctg > 1:1176760/1‑94 (MQ=2)
cccccccGCGGGGGCGTGGATCGAAACAATGCGGCGCGGGC.CTAT.GGCTGA.CGGACCC.GCCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAactgcgtgc < 1:3062797/100‑8 (MQ=2)
ccccccGCGGGGGCGTGGATCGAAACAATGCGGCGCGGGC.CTAT.GGCTGA.CGGACCC.GCCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAactgcgtgcg < 1:1300738/101‑9 (MQ=2)
ccccccGCGGGGGCGTGGATCGAAACAAAAAGCCGCCGACAAACGCGGCAAC.CGG.CCC.G.GCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAaccccgcggc > 2:4398618/1‑94 (MQ=2)
ccccccGCGGGGGCGTGGATCGAAACA.CCCGGCGCCGCAGCGAG.TGCGTC.TGGAACA.GGATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAactatgctgg > 1:879297/1‑93 (MQ=2)
ccccccGCGGGGGCGTGGATCGAAACA.CCCGGCGCCGCAGCGAG.TGCGTC.TGGAACA.GGATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAactatgctgg < 2:4805210/101‑9 (MQ=2)
cccccGCGGGGGCGTGGATCGAAACAATGCGGCGCGGGC.CTAT.GGCTGA.CGGACCC.GCCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAactgcgtgcgc > 1:2126314/1‑92 (MQ=2)
cccccGCGGGGGCGTGGATCGAAACAAAAAGCCGCCGACAAACGCGGCAAC.CGG.CCC.G.GCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAaccccgcggcg > 2:3079507/1‑93 (MQ=0)
gcgGGGGCGTGGATCGAAACATCTCGGTGCCGTCGCTCG.TCCAGC.CGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTg < 1:4928471/101‑1 (MQ=255)
gggggCGTGGATCGAAACATCTCGGTGCCGTCGCTCG.TCCAGC.CGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTc < 2:202747/101‑1 (MQ=255)
ggggCGTGGATCGAAACATCTCGGTGCCGTCGCTCG.TCCAGC.CGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCa < 2:182113/101‑1 (MQ=255)
ggCGTGGATCGAAACATCTCGGTGCCGTCGCTCG.TCCAGC.CGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACt < 2:149210/101‑1 (MQ=255)
gCGTGGATCGAAACATCTCGGTGCCGTCGCTCG.TCCAGC.CGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACtt < 1:980981/101‑1 (MQ=255)
cGTGGATCGAAACATCTCGGTGCCGTCGCTCG.TCCAGC.CGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTTTCACttt > 2:4627674/1‑101 (MQ=255)
cGTGGATCGAAACATCTCGGTGCCGTCGCTCG.TCCAGC.CGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACttt < 1:1018856/101‑1 (MQ=255)
cGTGGATCAAAACATCTCGGTGCCGTCGCTCG.TCCAGC.CGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACttt < 1:1507009/101‑1 (MQ=255)
gTGGATCGAAACATCTCGGTGCCGTCGCTCG.TCCAGC.CGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACTTTc < 2:4233693/101‑1 (MQ=255)
gTGGATCGAAACATCTCGGTGCCGTCGCTCG.TCCAGC.CGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACTTTc > 1:587675/1‑101 (MQ=255)
tGGATCGAAACATCTCGGTGCCGTCGCTCG.TCCAGC.CGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACTTTcg > 2:3419674/1‑101 (MQ=255)
ggATCGAAACATCTCGGTGCCGTCGCTCG.TCCAGC.CGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCAGCTTGCGGATTGTCCCTTTcgc > 2:2106032/1‑101 (MQ=255)
aTCGAAACATCTCGGTGCCGTCGCTCG.TCCAGC.CGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCgg > 1:2587850/1‑101 (MQ=255)
cGAAACATCTCGGTGCCGTCGCTCG.TCCAGC.CGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCgggg < 2:2484409/101‑1 (MQ=255)
cGAAACATCTCGGTGCCGTCGCTCG.TCCAGC.CGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCgggg > 1:1613284/1‑101 (MQ=255)
gAAACATCTCGGTGCCGTCGCTCG.TCCAGC.CGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGc > 2:2733277/1‑101 (MQ=255)
aTCTCGGTGCCGTCGCTCG.TCCAGC.CGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGc > 1:3862807/1‑101 (MQ=255)
tctcGGTGCCGTCGCTCG.TCCAGC.CGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCg > 2:1080119/1‑101 (MQ=255)
ctcGGTGCCGTCGCTCG.TCCAGC.CGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGt < 2:1301103/101‑1 (MQ=255)
ctcGGTGCCGTCGCTCG.TCCAGC.CGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGt > 2:1621199/1‑101 (MQ=255)
tcGGTGCCGTCGCTCG.TCCAGC.CGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTc < 1:3305611/101‑1 (MQ=255)
cGGTGCCGTCGCTCG.TCCAGC.CGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCg > 2:444413/1‑101 (MQ=255)
ggTGCCGTCGCTCG.TCCAGC.CGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGc > 1:3925045/1‑101 (MQ=255)
gTGCCGTCGCTCG.TCCAGC.CGG.CCT.TCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCt < 2:902090/101‑1 (MQ=255)
gTGCCGTCGCTCG.TCCAGC.CGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCt < 2:2653474/101‑1 (MQ=255)
gCCGTCGCTCG.TCCAGC.CGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTcc > 2:3567174/1‑101 (MQ=255)
gCCGTCGCTCG.TCCAGC.CGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTcc > 1:1860764/1‑101 (MQ=255)
gCCGTCGCTCG.TCCAGC.CGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTcc < 1:1533391/101‑1 (MQ=255)
gCCGTCGCTCG.TCCAGC.CGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTcc > 1:734552/1‑101 (MQ=255)
gTCGCTCG.TCCAGC.CGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTccccc > 2:3762553/1‑101 (MQ=255)
tCGCTCG.TCCAGC.CGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTcccccc < 2:684100/101‑1 (MQ=255)
g.TCCAGC.CGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCgggg < 1:4444244/101‑1 (MQ=255)
ccAGC.CGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGc < 1:4186209/101‑1 (MQ=255)
ccAGC.CGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGc < 1:1074913/101‑1 (MQ=255)
c.cGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTgg > 2:3621491/1‑101 (MQ=255)
c.cGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTgg < 1:4820175/101‑1 (MQ=255)
cGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGa < 2:3857583/101‑1 (MQ=255)
gg.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGAt < 2:3246873/101‑1 (MQ=255)
g.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATc < 1:4387688/101‑1 (MQ=255)
|
AAACATCGCCGCTTTGGCGGTCGACAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTCGGTGCCGTCGCTCG.TCCAGC.CGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCG > NC_014034/1395462‑1395660
Base quality scores:
ATCG
< 3 ≤
ATCG
< 18 ≤
ATCG
< 26 ≤
ATCG
< 33 ≤
ATCG
< 40 ≤
ATCG
|