| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 1,395,732 | G→T | 9.8% | intergenic (+544/‑387) | RCAP_rcc01306 → / → RCAP_rcc01307 | Cas2 family CRISPR‑associated protein/hypothetical protein |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 1,395,732 | 0 | G→T | 9.8% | 72.8 ‑1.1 ‑0.4 | 296 | intergenic (+544/‑387) | RCAP_rcc01306/RCAP_rcc01307 | Cas2 family CRISPR‑associated protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): new base (11/18): ref base (127/140): total (138/158) | ||||||||||
| Fisher's exact test strand distribution p-value = 3.36e-01 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 4.07e-01 | ||||||||||
Only 100 of 305 total aligned reads displayed.
CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGGGCAGTTCGAGCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCTG..GCGCAAACGG..AAAGTCT.G.TCGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACCTGCGGCGTGAGTTGCCAGTGATAGACGCCGTGGAC > NC_014034/1395632‑1395831
|
gTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGGGCAGTTCGAGCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.gg > 2:2690386/1‑101 (MQ=255)
gcGCCCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGGGCAGTTCGAGCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGt < 2:2724383/100‑1 (MQ=255)
cTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGGGCAGTTCGAGCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATg > 1:4599649/1‑101 (MQ=255)
cTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGGGCAGTTCGAGCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATg < 2:3657155/101‑1 (MQ=255)
cccccccGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGGGCAGTTCGAGCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATgg < 2:216899/100‑1 (MQ=255)
cccccccGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGGGCAGTTCGAGCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATgg < 1:2853699/100‑1 (MQ=255)
cccccGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGGGCAGTTCGAGCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGAt < 1:3621762/101‑1 (MQ=255)
cccccGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGGGCAGTTCGAGCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGAt < 1:299709/101‑1 (MQ=255)
cccccGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGGGCAGTTCGAGCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGAt > 2:1041889/1‑101 (MQ=255)
ccccGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGGGCAGTTCGAGCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATc < 2:1935384/101‑1 (MQ=255)
ccccGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGGGCAGTTCGAGCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATc < 1:340998/101‑1 (MQ=255)
cccGGGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGGGCAGTTCGAGCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCt < 1:2611943/101‑1 (MQ=255)
cccGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGGGCAGTTCGAGCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCt < 1:2805292/101‑1 (MQ=255)
gcgGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGGGCAGTTCGAGCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCTG..gc > 1:1235156/1‑101 (MQ=255)
ggggCGTGGATCGAAACATCTGCATGTAGTCGGCGGGCAGTTCGAGCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCTG..GCGCa > 1:170856/1‑101 (MQ=255)
gggCGTGGATCGAAACATCTGCATGTAGTCGGCGGGCAGTTCGAGCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCTG..GCGCaa < 1:3254446/101‑1 (MQ=255)
ggCGTGGATCGAAACATCTGCATGTAGTCGGCGGGCAGTTCGAGCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCTG..GCGCaaa > 2:521171/1‑101 (MQ=255)
gTGGATCGAAACATCTGCATGTAGTCGGCGGGCAGTTCGAGCCGCAGTCGCTCCCCCCGCGGGGGCGTGGAGCGAAACT.GGTATGGATCTG..GCGCAAACgg > 2:479927/1‑101 (MQ=255)
tGGATCGAAACATCTGCATGTAGTGGGCGGGCAGTTCGAGCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCTG..GCGCAAACGG..a < 2:1860631/101‑1 (MQ=255)
ggATCGAAACATCTGCATGTAGTCGGCGGGCAGTTCGAGCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCTG..GCGCAAACGG..aa > 2:2285565/1‑101 (MQ=255)
gATCGAAACATCTGCATGTAGTCGGCGGGCAGTTCGAGCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCTG..GCGCAAACGG..aaa > 1:138248/1‑101 (MQ=255)
cGAAACATCTGCATGTAGTCGGCGGGCAGTTCGAGCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCTG..GCGCAAACGG..AAAGTc > 2:2767760/1‑101 (MQ=255)
cGAAACATCTGCATGTAGTCGGCGGGCAGTTCGAGCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCTG..GCGCAAACGG..AAAGTc > 1:516782/1‑101 (MQ=255)
aCATCTGCATGTAGTCGGCGGGCAGTTCGAGCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCTG..GCGCAAACGG..AAAGTCT.g.tc > 1:1928921/1‑101 (MQ=255)
cATCTGCATGTAGTCGGCGGGCAGTTCGAGCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCTG..GCGCAAACGG..AAAGTCT.g.tcg > 2:4155464/1‑101 (MQ=255)
ctCTGCATGTGGCGGGCGGGCAGTTCGAGCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCTG..GCGCAAACGG..AAAGTCT.g.tcgt < 2:1548907/100‑1 (MQ=255)
aTCTGCATGTAGTCGGCGGGCAGTTCGAGCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCTG..GCGCAAACGG..AAAGTCT.g.tcgt < 2:1616498/101‑1 (MQ=255)
cTGCATGTAGTCGGCGGGCAGTTCGAGCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCTG..GCGCAAACGG..AAAGTCT.G.tcgtcg > 1:2398007/1‑101 (MQ=255)
aTGTAGTCGGCGGGCAGTTCGAGCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCTG..GCGCAAACGG..AAAGTCT.G.TCGTCGCT.cc > 1:3816673/1‑101 (MQ=255)
ggTAGTCGGCGGGCAGTTCGAGCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCTG..GCGCAAACGG..AACGTCT.G.TCGTCGCT.ccc < 1:4413511/100‑1 (MQ=255)
gTAGTCGGGGGGCAGTTCGAGCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCTG..GCGCAAACGG..AAAGTCT.G.TCGTCGCT.cccc < 1:1161287/101‑1 (MQ=255)
gTAGTCGGCGGGCAGTTCGAGCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCTG..GCGCAAACGG..AAAGTCT.G.TCGTCGCT.cccc < 2:4599327/101‑1 (MQ=255)
gTAGTCGGCGGGCAGTTCGAGCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCTG..GCGCAAACGG..AAAGTCT.G.TCGTCGCT.cccc > 1:3087414/1‑101 (MQ=255)
gTAGTCGGCGGGAAGTTCGAGCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCTG..GCGCAAACGG..AAAGTCT.G.TCGTCGCT.cccc < 2:4215985/101‑1 (MQ=255)
aGTCGGCGGGCAGTTCGAGCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCTG..GCGCAAACGG..AAAGTCT.G.TCGTCGCT.cccccc > 1:73292/1‑101 (MQ=255)
tgggggggCAGTTCGAGCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCTG..GCGCAAACGG..AAAGTCT.G.TCGTCGCT.CCCCCcgc < 2:4502216/96‑1 (MQ=255)
cggcggGCAGTTCGAGCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCTG..GCGCAAACGG..AAAGTCT.G.TCGTCGCT.CCCCCcgcg > 1:2091024/1‑101 (MQ=255)
ggcggGCAGTGCGAGCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCTG..GCGCAAACGG..AAAGTCT.G.TCGTCGCT.CCCCCCGCgg < 2:3864247/101‑1 (MQ=255)
gggCAGTTCGAGCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCTG..GCGCAAACGG..AAAGTCT.G.TCGTCGCT.CCCCCCGCggggg > 1:4037085/1‑101 (MQ=255)
gCAGTGCGAGCCGCAGTCGCGCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCTG..GCGCAAACGG..AAAGTCT.G.TCGTCGCTCCCCCCCGCGGGGGc < 2:2617497/101‑1 (MQ=38)
cAGTTCGAGCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCTG..GCGCAAACGG..AAAGTCT.G.TCGTCGCT.CCCCCCGCGGGGGCGt < 1:2690571/101‑1 (MQ=255)
aGTTCGAGCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCTG..GCGCAAACGG..AAAGTCT.G.TCGTCGCT.CCCCCCGCGGGGGCGTg > 2:3345035/1‑101 (MQ=255)
aGTTCGAGCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCTG..GCGCAAACGG..AAAGTCT.G.TCGTCGCN.CCCCCCGCGGGGGCGTg > 2:1196052/1‑101 (MQ=255)
gtgcGAGCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCTG..GCGCAAACGG..AAAGTCT.G.TCGTCGCT.CCCCCCGCGGGGGCGTgg < 1:2186852/98‑1 (MQ=255)
gTTCGAGCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCTG..GCGCAAACGG..AAAGTCT.G.TCGTCGCT.CCCCCCGCGGGGGCGTgg > 2:3049997/1‑101 (MQ=255)
ttCGAGCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCTG..GCGCAAACGG..AAAGTCT.G.TCGTCGCT.CCCCCCGCGGGGGCGTGGa < 1:4930463/101‑1 (MQ=255)
tcaagattcAGTCGCGCCCCCCGCGGGGGCGTGGATCGAAACTCGGCAAGGACATC..GCCGATCTGGGTAAGGCCG.G.TGGTCGCT.CCCCCCGCGGGGGCGTg < 2:3251915/93‑1 (MQ=2)
tCGAGCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCTG..GCGCAAACGG..AAAGTCT.G.TCGTCGCT.CCCCCCGCGGGGGCGTGGAt < 1:3604172/101‑1 (MQ=255)
caagattcAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGGCAAGGACATC..GCCGATCTGGGTAAGGCCG.G.TGGTCGCT.CCCCCCGCGGGGGCGTgg < 1:4882990/94‑1 (MQ=2)
cGAGCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCTG..GCGCAAACGG..AAAGTCT.G.TCGTCGCT.CCCCCCGCGGGGGCGTGGATc < 2:721739/101‑1 (MQ=255)
gAGCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCTG..GCGCAAACGG..AAAGTCT.G.TCGTCGCT.CCCCCCGCGGGGGCGTGGATCg < 1:2328698/101‑1 (MQ=255)
aagattcAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGGCAAGGACATC..GCCGATCTGGGTAAGGCCG.G.TGGTCGCT.CCCCCCGCGGGGGCGTGGa < 1:3662728/95‑1 (MQ=2)
aagattcAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGGCAAGGACATC..GCCGATCTGGGTAAGGCCG.G.TGGTCGCT.CCCCCCGCGGGGGCGTGGa < 1:2524565/95‑1 (MQ=2)
agattcAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGGCAAGGACATC..GCCGATCTGGGTAAGGCCG.G.TGGTCGCT.CCCCCCGCGGGGGCGTGGAt > 2:1988707/6‑101 (MQ=2)
gcgctggTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.TG.AT.GACCAGATCCGCAATCGG..CCGGGCTCGATCGTCGCT.CCCCCCGCGGGGGCGTGGATCg < 1:851139/95‑1 (MQ=0)
gcgctggTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.TG.AT.GACCAGATCCGCAATCGG..CCGGGCTCGATCGTCGCT.CCCCCCGCGGGGGCGTGGATCg < 1:3977772/95‑1 (MQ=0)
gattcAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGGCAAGGACATC..GCCGATCTGGGTAAGGCCG.G.GGGTCGCT.CCCCCCGCGGGGGCGTGGATc > 2:506593/5‑101 (MQ=2)
ccGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCTG..GCGCAAACGG..AAAGTCT.G.TGGTCGCT.CCCCCCGCGGGGGCGTGGATCGaaa < 1:4527538/101‑1 (MQ=255)
attcAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGGCAAGGACATC..GCCGATCTGGGTAAGGCCG.G.TGGTCGCT.CCCCCCGCGGGGGCGTGGATCg > 1:212518/4‑101 (MQ=2)
attcAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGGCAAGGACATC..GCCGATCTGGGTAAGGCCG.G.TGGTCGCT.CCCCCCGCGGGGGCGTGGATCg < 1:4809219/98‑1 (MQ=2)
ttcAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGGCAAGGACATC..GCCGATCTGGGTACGGCCG.G.TGGTCGCT.CCCCCCGCGGGGGCGCGGATCGa > 1:4263048/3‑101 (MQ=0)
ttcAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGGCAAGGACATC..GCCGATCTGGGTAAGGCCG.G.TGGTCGCT.CCCCCCGCGGGGGCGTGGATCGa < 2:4752545/99‑1 (MQ=2)
cGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCTG..GCGCAAACGG..AAAGTCT.G.TCGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAAc < 1:69988/101‑1 (MQ=255)
tcAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGGCAAGGACATC..GCCGATCTGGGTAAGGCCG.G.TGGTCGCT.CCCCCCGCGGGGGCGTGGATCGaa > 2:3575117/2‑101 (MQ=2)
ctggTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.TG.AT.GACCAGATCCGCAATCGG..CCGGGCTCGATCGTCGCT.CCCCCCGCGGGGGCGTGGATCGaaa < 2:4923984/98‑1 (MQ=2)
tggTCGCCCCCCCCGCGGGGGCGTGGATCGAAACT.TG.AT.GACCAGATCCGCAATCGG..CCGGGCTCGATCGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAAc < 2:1387470/99‑1 (MQ=2)
cAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCTG..GCGCAAACGG..AAAGTCT.G.TCGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACCt > 1:3220649/1‑101 (MQ=255)
ggTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.TG.AT.GACCAGATCCGCAATCGG..CCGGGCTCGATCGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAAcc > 2:3711699/2‑101 (MQ=2)
aGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGGCAAGGACATC..GCCGATCTGGGTAAGGCCG.G.TGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAAc < 1:955020/101‑1 (MQ=2)
aGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCTG..GCGCAAACGG..AAAGTCT.G.TCGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACCTg < 2:1488763/101‑1 (MQ=255)
gTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.TG.AT.GACCAGATCCGCAATCGG..CCGGGCTCGATCGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACCt < 2:4361923/101‑1 (MQ=2)
gTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCTG..GCGCAAACGG..AAAGTCT.G.TCGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACCTgc > 1:1314846/1‑101 (MQ=255)
tCGCCCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCTG..GCGCAAACGG..AAAGTCT.G.TCGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACCTgcg < 1:4286753/101‑1 (MQ=255)
cGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGGCAAGGACATC..GCCGATCTGGGTAAGGCCG.G.TGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAAcacc < 1:1849072/101‑4 (MQ=2)
cGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCTG..GCGCAAACGG..AAAGTCT.G.TCGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACCTgcgg > 2:4903140/1‑101 (MQ=255)
cGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCTG..GCGCAAACGG..AAAGTCT.G.TCGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACCCgcgg > 1:2222896/1‑101 (MQ=255)
gCTCCCCCCGCGGGGGCGTGGATCGAAACTCGGCAAGGACATC..GCCGATCTGGGTAAGGCCG.G.TGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAAcaccc > 2:4984721/1‑97 (MQ=2)
gCTCCCCCCGCGGGGGCGTGGATCGAAACT.TG.AT.GACCAGATCCGCAATCGG..CCGGGCTCGATCGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACCtatg < 1:155601/101‑4 (MQ=2)
gCTCCCCCCGCGGGGGCGTGGATCGAAACT.TG.AT.GACCAGATCCGCAATCGG..CCGGGCTCGATCGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACCtatg < 1:1057341/101‑4 (MQ=2)
gCTCCCCCCGCGGGGGCGTGGATCGAAACT.TG.AT.GACCAGATCCGCAATCGG..CCGGGCTCGATCGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACCtatg > 1:3715007/1‑98 (MQ=2)
gCTCCCCCCGCGGGGGCGTGGATCGAAACT.TG.AT.GACCAGATCCGCAATCGG..CCGGGCTCGATCGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACCtatg > 2:3416623/1‑98 (MQ=2)
gCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCTG..GCGCAAACGG..AAAGTCT.G.TCGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACCTgcggt < 2:4565843/101‑2 (MQ=255)
cTCCCCCCGCGGGGGCGTGGATCGAAACTCGGCAAGGACATC..GCCGATCTGGGTAAGGCCG.G.TGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAAcacccg > 2:2897307/1‑96 (MQ=2)
cTCCCCCCGCGGGGGCGTGGATCGAAACT.TG.AT.GACCAGATCCGCAATCGG..CCGGGCTCGATCGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACCtatga < 1:4987852/101‑5 (MQ=2)
tCCCCCCGCGGGGGCGTGGATCGAAACT.TG.AT.GACCAGATCCGCAATCGG..CCGGGCTCGATCGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAAcgtatgag < 1:2066794/101‑8 (MQ=2)
cccccGCGGGGGCGTGGATCGAAACTCGGCAAGGACATC..GCCGATCTGGGTAAGGCCG.G.TGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAAcacccggcg > 2:3771739/1‑93 (MQ=2)
cccGCGGGGGCGTGGATCGAAACT.GGTATGGATCTG..GCGCAAACGG..AAAGTCT.G.TCGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACCTGCGGCGTTAGt < 2:4274163/101‑1 (MQ=255)
cccGCGGGGGCGTGGATCGAAACT.GGTATGGATCTG..GCGCAAACGG..AAAGTCT.G.TCGGCGCT.CCCCCCGCGGGGGCGTGGATCGAAACCTGCGGCGTGAGt < 1:4623008/101‑1 (MQ=255)
cgcgGGGGCGTGGATCGAAACT.GGTATGGATCTG..GCGCAAACGG..AAAGTCT.G.TCGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACCTGCGGCGTGAgatc > 2:5017295/1‑98 (MQ=255)
cgGGGGCGTGGATCGAAACT.GGTATGGATCTG..GCGCAAACGG..AAAGTCT.G.TCGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACCTGCGGCGTGAGTTGcc < 1:2679592/101‑1 (MQ=255)
gggCGTGGATCGAAACT.GGTATGGATCTG..GCGCAAACGG..AAAGTCT.G.TCGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACCTGCGGCGTGAGTTGCCAgg > 2:2848348/1‑100 (MQ=255)
gggCGTGGATCGAAACT.GGTATGGATCTG..GCGCAAACGG..AAAGTCT.G.TCGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACCTGCGGCGTGAGTTGCCAGt < 2:2090876/101‑1 (MQ=255)
tGGATCGAAACT.GGTATGGATCTG..GCGCAAACGG..AAAGTCT.G.TCGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACCTTCGGCGTGAGTTGCCAGTGATAg < 2:3948830/101‑1 (MQ=255)
tGGATCGAAACT.GGTATGGATCTG..GCGCAAACGG..AAAGTCT.G.TCGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACCTGCGGCGTGAGTTGCCAGTGATAg < 2:4009932/101‑1 (MQ=255)
gggATCGAAACT.GGTATGGATCTG..GCGCAAACGG..AAAGTCT.G.TCGTCGCT..CCCCCGCGGGGGCGTGGATCGAAACCTGCGGCGTGAGTTGCCAGTGATAGa < 1:3491890/100‑1 (MQ=255)
gAAACT.GGTATGGATCTG..GCGCAAACGG..AAAGTCT.G.TCGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACCTGCGGCGTGAGTTGCCAGTGATAGACGCCg > 1:3327564/1‑101 (MQ=255)
gAAACT.GGTATGGATCTG..GCGCAAACGG..AAAGTCT.G.TCGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACCTGCGGCGTGAGTTGCCAGTGATAGACGCCg > 2:2298444/1‑101 (MQ=255)
aCT.GGTATGGATCTG..GCGCAAACGG..AAAGTCT.G.TCGTCGCT.CCCCCCGCGGGGGCGCGGATCGAAACCTGCGGCGTGAGTTGCCAGTGATAGACGCCGTgg > 1:2971400/1‑101 (MQ=255)
cT.GGTATGGATCTG..GCGCAAACGG..AAAGTCT.G.TCGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACCTGCGGCGTGAGTTGCCAGTGATAGACGCCGTGGa > 2:4311946/1‑101 (MQ=255)
cT.GGTATGGATCTG..GCGCAAACGG..AAAGTCT.G.TCGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACCTGCGGCGTGAGTTGCCAGTGATAGACGCCGTGGa > 2:2219080/1‑101 (MQ=255)
|
CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGGGCAGTTCGAGCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCTG..GCGCAAACGG..AAAGTCT.G.TCGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACCTGCGGCGTGAGTTGCCAGTGATAGACGCCGTGGAC > NC_014034/1395632‑1395831
Base quality scores:
ATCG
< 3 ≤
ATCG
< 20 ≤
ATCG
< 27 ≤
ATCG
< 33 ≤
ATCG
< 40 ≤
ATCG
|