| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 1,395,749 | A→T | 15.6% | intergenic (+561/‑370) | RCAP_rcc01306 → / → RCAP_rcc01307 | Cas2 family CRISPR‑associated protein/hypothetical protein |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 1,395,749 | 0 | A→T | 15.6% | 131.5 ‑0.9 ‑0.0 | 290 | intergenic (+561/‑370) | RCAP_rcc01306/RCAP_rcc01307 | Cas2 family CRISPR‑associated protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): new base (19/26): ref base (121/123): total (141/149) | ||||||||||
| Fisher's exact test strand distribution p-value = 4.18e-01 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 9.39e-01 | ||||||||||
Only 100 of 306 total aligned reads displayed.
GGGCGTGGATCGAAACATCTGCATGTAGTCGGCGGGCAGTTCGAGCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATG.GATCTG..GCGCAAACGG..AAAGTCT.G..TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCGGCGTGAGTTGCCAGTGATAGACGCCGTGGACGTCGCTCCCCCCGCGGGG > NC_014034/1395649‑1395849
|
gggCGTGGATCGAAACATCTGCATGTAGTCGGCGGGCAGTTCGAGCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATG.GATCTG..GCGCaa < 1:3254446/101‑1 (MQ=255)
ggggTGGATCGAAACATCTGCATGTAGTCGGCGGGCAGTTCGAGCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATG.GATCTG..GCGCaaa < 1:3068081/98‑1 (MQ=255)
ggCGTGGATCGAAACATCTGCATGTAGTCGGCGGGCAGTTCGAGCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATG.GATCTG..GCGCaaa > 2:521171/1‑101 (MQ=255)
ggATCGAAACATCTGCATGTAGTCGGCGGGCAGTTCGAGCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATG.GATCTG..GCGCAAACGG..aa > 1:4133036/1‑101 (MQ=255)
gATCGAAACATCTGCATGTAGTCGGCGGGCAGTTCGAGCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATG.GATCTG..GCGCAAACGG..aaa > 2:3603901/1‑101 (MQ=255)
cGAAACATCTGCATGTAGTCGGCGGGCAGTTCGAGCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGCATG.GATCTG..GCGCAAACGG..AAAGTc > 2:291157/1‑101 (MQ=255)
gAAACATCTGCATGTAGTCGGCGGGCAGTTCGAGCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATG.GATCTG..GCGCAAACGG..AAAGTCt > 2:1896613/1‑101 (MQ=255)
aaaCATCTGCATGTAGTCGGCGGGCAGTTCGAGCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATG.GATCTG..GCGCAAACGG..AAAGTCT.g < 2:4403571/101‑1 (MQ=255)
aaaCATCTGCATGTAGTCGGCGGGCAGTTCGAGCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATG.GATCTG..GCGCAAACGG..AAAGTCT.g < 1:220889/101‑1 (MQ=255)
aaaCATCTGCATGTAGTCGGCGGGCAGTTCGAGCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATG.GATCTG..GCGCAAACGG..AAAGTCT.g < 1:89681/101‑1 (MQ=255)
aaaCATCTGCATGTAGTCGGCGGGCAGTTCGAGCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATG.GATCTG..GCGCAAACGG..AAAGTCT.g > 1:2734176/1‑101 (MQ=255)
cATCTGCATGTAGTCGGCGGGCAGTTCGAGCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATG.GATCTG..GCGCAAACGG..AAAGTCT.g..tcg < 1:4909450/101‑1 (MQ=255)
cATCTGCATGTAGTCGGCGGGCAGTTCGAGCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATG.GATCTG..GCGCAAACGG..AAAGTCT.g..tcg > 1:2817565/1‑101 (MQ=255)
tCTGCATGTAGTCGGCGGGCAGTTCGAGCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATG.GATCTG..GCGCAAACGG..AAAGTCT.g..tcgtc > 2:2678765/1‑101 (MQ=255)
tGCATGTAGTCGGCGGGCAGTTCGAGCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATG.GATCTG..GCGCAAACGG..AAAGTCT.G..TCGTCGc > 2:2857642/1‑101 (MQ=255)
tGCATGTAGTCGGCGGGCAGTTCGAGCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATG.GATCTG..GCGCAAACGG..AAAGTCT.G..TCGTCGc > 2:2260291/1‑101 (MQ=255)
gTAGTCGGGGGGCAGTTCGAGCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATG.GATCTG..GCGCAAACGG..AAAGTCT.G..TCGTCGCTcccc < 1:1161287/101‑1 (MQ=255)
gTAGTCGGCGGGCAGTTCGAGCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATG.GATCTG..GCGCAAACGG..AAAGTCT.G..TCGTCGCTcccc < 2:4599327/101‑1 (MQ=255)
cggcggcggGCAGTTCGACCCGCTGTCGCTGCCCCCGCGGGGGCGTGGATCTAAACT.GGTTTG.GATCTG..GCGCAAACGG..AAAGTCT.G..TCGTCGCTcccccc < 1:798152/98‑1 (MQ=38)
gTCGGGGGGCAGTTCGAGCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATG.GATCTG..GCGCAAACGG..AAAGTCT.G..TCGTCGCTCCCCCcg < 1:3210529/101‑1 (MQ=255)
tgggggggCAGTTCGAGCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATG.GATCTG..GCGCAAACGG..AAAGTCT.G..TCGTCGCTCCCCCcgc < 2:4502216/96‑1 (MQ=255)
ggCGGTTCGAGCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATG.GATCTG..GCGCAAACGG..AAAGTCT.G..TCGTCGCTCCCCCCGCGGGGGc < 2:3378504/101‑1 (MQ=255)
aGTTCGAGCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATG.GATCTG..GCGCAAACGG..AAAGTCT.G..TCGTCGCNCCCCCCGCGGGGGCGTg > 2:1196052/1‑101 (MQ=255)
gTTGGAGCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATG.GATCTG..GCGCAAACGG..AAAGTCT.G..TCGTCGCTCCCCCCGCGGGGGCGTgg < 1:3915921/101‑1 (MQ=255)
tCGAGCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATG.GATCTG..GCGCAAACGG..AAAGTCT.G..TCGTCGCTCCCCCCGCGGGGGCGTGGAt < 1:3604172/101‑1 (MQ=255)
cGAGCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATG.GATCTG..GCGCAAACGG..AAAGTCT.G..TCGTCGCTCCCCCCGCGGGGGCGTGGATc < 2:721739/101‑1 (MQ=255)
gcgcgctggTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.TG.AT..GACCAGATCCGCAATCGG..CCGGGCTCGA.TCGTCGCTCCCCCCGCGGGGGCGTGGAt < 1:98905/93‑1 (MQ=0)
gattcAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGGCAAG.GACATC..GCCGATCTGGGTAAGGCCG.G..GGGTCGCTCCCCCCGCGGGGGCGTGGATc > 2:506593/5‑101 (MQ=2)
ccGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATG.GATCTG..GCGCAAACGG..AAAGTCT.G..TGGTCGCTCCCCCCGCGGGGGCGTGGATCGaaa < 1:4527538/101‑1 (MQ=255)
attcAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGGCAAG.GACATC..GCCGATCTGGGTAAGGCCG.G..TGGTCGCTCCCCCCGCGGGGGCGTGGATCg < 1:60664/98‑1 (MQ=2)
ttcAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGGCAAG.GACATC..GCCGATCTGGGTAAGGCCG.G..TGGTCGCTCCCCCCGCGGGGGCGTGGATCGa < 1:2681320/99‑1 (MQ=2)
tcAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGGCAAG.GACATC..GCCGATCTGGGTAAGGCCG.G..TGGTCGCTCCCCCCGCGGGGGCGTGGATCGaa > 2:3575117/2‑101 (MQ=2)
gCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATG.GATCTG..GCGCAAACGG..AAAGTCT.G..TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAcc > 2:4111666/1‑101 (MQ=255)
ctggTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.TG.AT..GACCAGATCCGCAATCGG..CCGGGCTCGA.TCGTCGCTCCCCCCGCGGGGGCGTGGATCGaaa < 2:4923984/98‑1 (MQ=2)
tggTCGCCCCCCCCGCGGGGGCGTGGATCGAAACT.TG.AT..GACCAGATCCGCAATCGG..CCGGGCTCGA.TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAc < 2:1387470/99‑1 (MQ=2)
cAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATG.GATCTG..GCGCAAACGG..AAAGTCT.G..TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCt < 1:1941386/101‑1 (MQ=255)
ggTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.TG.AT..GACCAGATCCGCAATCGG..CCGGGCTCGA.TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAcc > 2:3711699/2‑101 (MQ=2)
ggTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.TG.AT..GACCAGATCCGCAATCGG..CCGGGCTCGA.TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAcc < 1:1258730/100‑1 (MQ=2)
ggTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.TG.AT..GACCAGATCCGCAATCGG..CCGGGCTCGA.TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAcc > 2:2289756/2‑101 (MQ=2)
aGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGGCAAG.GACATC..GCCGATCTGGGTAAGGCCG.G..TGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAc < 2:4756481/101‑1 (MQ=2)
gTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGGCAAG.GACATC..GCCGATCTGGGTAAGGCCG.G..TGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAca < 1:14932/101‑2 (MQ=2)
gTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGGCAAG.GACATC..GCCGATCTGGGTAAGGCCG.G..TGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAca > 1:1683291/1‑100 (MQ=2)
gTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.TG.AT..GACCAGATCCGCAATCGG..CCGGGCTCGA.TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCt < 2:4361923/101‑1 (MQ=2)
gTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATG.GATCTG..GCGCAAACGG..AAAGTCT.G..TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTgc > 2:4007226/1‑101 (MQ=255)
tCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGGCAAG.GACATC..GCCGATCTGGGTAAGGCCG.G..TGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAcac < 1:2535894/101‑3 (MQ=2)
gcGCTCCCCCCGCGGGGGCGTGGATCGAAACT.TG.ATGACCAAAT..CCGCAATCGG..CCGGGCT.GGATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCta < 1:4264405/100‑2 (MQ=2)
cGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATG.GATCTG..GCGCAAACGG..AAAGGCT.G..TCCTCGCTCCCCCCGCGGGGGCGGGGCTCGAAAGCTgtgg > 2:4184789/1‑101 (MQ=25)
gCTCCCCCCGCGGGGGCGTGGATCGAAACTCGGCAAG.GACATC..GCCGATCTGGGTAAGGCCG.G..TGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAcaccc > 2:4984721/1‑97 (MQ=2)
gCTCCCCCCGCGGGGGCGTGGATCGAAACTCGGCAAG.GACATC..GCCGATCTGGGTAAGGCCG.G..TGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAcaccc < 1:3638760/101‑5 (MQ=2)
gCTCCCCCCGCGGGGGCGTGGATCGAAACT.TG.AT..GACCAGATCCGCAATCGG..CCGGGCTCGA.TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCtatg > 1:4871950/1‑98 (MQ=2)
gCTCCCCCCGCGGGGGCGTGGATCGAAACT.TG.AT..GACCAGATCCGCAATCGG..CCGGGCTCGA.TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCtatg < 1:155601/101‑4 (MQ=2)
gCTCCCCCCGCGGGGGCGTGGATCGAAACT.TG.AT..GACCAGATCCGCAATCGG..CCGGGCTCGA.TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCtatg > 1:3715007/1‑98 (MQ=2)
gCTCCCCCCGCGGGGGCGTGGATCGAAACT.TG.AT..GACCAGATCCGCAATCGG..CCGGGCTCGA.TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCtatg < 1:1057341/101‑4 (MQ=2)
gCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATG.GATCTG..GCGCAAACGG..AAAGTCT.G..TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTgcggt < 2:4565843/101‑2 (MQ=255)
gCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATG.GATCTG..GCGCAAACGG..AAAGTCT.G..TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTgcggc > 1:3488700/1‑101 (MQ=255)
ccccccccGGGGGGGCGTGGATCGAAACTCGGCAAG.GACATC..GCCGATCTGGGTAAGGCCG.G..TGGTCGCCCCCCCCGCGGGGGCGTGGATCGAAAcacccg < 1:2651617/99‑6 (MQ=2)
cTCCCCCCGCGGGGGCGTGGATCGAAACTCGGCAAG.GACATC..GCCGATCTGGGTAAGGCCG.G..TGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAcacccg < 2:4893434/101‑6 (MQ=2)
tCCCCCCGCGGGGGCGTGGATCGAAACT.TG.AT..GACCAGATCCGCAATCGG..CCGGGCTCGA.TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCtatgag > 1:2439499/1‑96 (MQ=2)
tCCCCCCGCGGGGGCGTGGATCGAAACT.TG.AT..GACCAGATCCGCAATCGG..CCGGGCTCGA.TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCtatgag < 1:3037247/101‑6 (MQ=2)
tCCCCCCGCGGGGGCGTGGATCGAAACT.TG.AT..GACCAGATCCGCAATCGG..CCGGGCTCGA.TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCtatgag > 2:3106645/1‑96 (MQ=2)
tCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATG.GATCTG..GCGCAAACGG..AAAGTCT.G..TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTgcggcgg > 2:1599849/1‑100 (MQ=255)
cccccccGCGGGGGCGTGGATCGAAACTCGGCAAG.GACATC..GCCGATCTGGGTAAGGCCG.G..TGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAcacccgg < 2:3894399/100‑7 (MQ=0)
gatctcgcgGGGGCGTGGATCGAAACT.GGTATG.GATCTG..GCGCAAACGG..AAAGTCT.G..TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCGGCGTg < 1:5017625/96‑1 (MQ=255)
ccccccGCGGGGGCGTGGATCGAAACTCGGCAAG.GACATC..GCCGATCTGGGTAAGGCCG.G..TGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAcacccggc > 1:2159312/1‑94 (MQ=0)
ccccccGCGGGGGCGTGGATCGAAACT.GGTATG.GATCTG..GCGCAAACGG..AAAGTCT.G..TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCGGCGTg < 2:1530746/101‑1 (MQ=255)
ccccccGCGGGGGCGTGGATCGAAACT.GGTATG.GATCTG..GCGCAAACGG..AAAGTCT.G..TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCGGCGTg > 2:2183771/1‑101 (MQ=255)
cccccGCGGGGGCGTGGATCGAAACTCGGCAAG.GACATC..GCCGATCTGGGTAAGGCCG.G..TGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAcacccggcg > 2:3771739/1‑93 (MQ=2)
cccccGCGGGGGCGTGGATCGAAACT.GGTATG.GATCTG..GCGCAAACGG..AAAGTCT.G..TCGTCGCT.CCCCCGCGGGGGCGTGGATCGAAACCCGCGGCGGGAg > 2:3491625/1‑101 (MQ=255)
ccccGCGGGGGCGTGGATCGAAACT.GGTATG.GATCTG..GCGCAAACGG..AAAGTCT.G..TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCGGCGTGAg < 1:3810210/101‑1 (MQ=255)
cccGCGGGGGCGTGGATCGAAACT.GGTATG.GATCTG..GCGCAAACGG..AAAGTCT.G..TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCGGCGTTAGt < 2:4274163/101‑1 (MQ=255)
ccGCGGGGGCGTGGATCGAAACT.GGTATG.GATCTG..GCGCAAACGG..AAAGTCT.G..TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCGGCGTGAGtt < 1:133561/101‑1 (MQ=255)
cgcgGGGGCGTGGATCGAAACT.GGTATG.GATCTG..GCGCAAACGG..AAAGTCT.G..TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCGGCGTGAgatc > 2:5017295/1‑98 (MQ=255)
gggggCGTGGATCGAAACT.GGTATG.GATCTG..GCGCAAACGG..AAAGTCT.G..TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCGGCGTGAGTTGCCa > 1:2319675/1‑101 (MQ=255)
ggggCGTGGATCGAAACT.GGTATG.GATCTG..GCGCAAACGG..AAAGTCT.G..TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCGGCGTGAGTTGCCAg > 2:1964466/1‑101 (MQ=255)
ggggCGTGGATCGAAACT.GGTACG.GATCTG..GCGCAAACGG..AAAGTCT.G..TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCGGCGTGAGTTGCCAg > 2:2219794/1‑101 (MQ=255)
gggCGTGGATCGAAACT.GGTATG.GATCTG..GCGCAAACGG..AAAGTCT.G..TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCGGCGTGAGTTGCCAGt < 2:2090876/101‑1 (MQ=255)
cGTGGATCGAAACT.GGTATG.GATCTG..GCGCAAACGG..AAAGTCT.G..TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCGGCGTGAGTTGCCAGTGAt < 1:2384191/101‑1 (MQ=255)
cGTGGATCGAAACT.GGTATG.GATCTG..GCGCAAACGG..AAAGTCT.G..TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCGGCGTGAGTTGCCAGTGAt < 1:4326667/101‑1 (MQ=255)
gTGGATCGAAACT.GGTATG.GATCTG..GCGCAAACGG..AAAGTCT.G..TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCGGCGTGAGTTGCCAGTGATa > 2:2752649/1‑101 (MQ=255)
tGGATCGAAACT.GGTATG.GATCTG..GCGCAAACGG..AAAGTCT.G..TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCGGCGTGAGTTGCCAGTGATAg > 1:728176/1‑101 (MQ=255)
ggATCGAAACT.GGTATG.GATCTG..GCGCAAACGG..AAAGTCT.G..TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCGGCGTGAGTTGCCAGTGATAGa > 1:4601131/1‑101 (MQ=255)
aTCGAAACT.GGTATG.GATCTG..GCGCAAACGG..AAAGTCT.G..TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCGGCGTGAGTTGCCAGTGATAGACg < 1:444478/101‑1 (MQ=255)
aTCGAAAAT.GGAATG.GATCAG..GCGCAAACGG..TAAGTCT.G..TCGTCGGTCCCCCCGCGGGGGCGTGGATCGAAGCACGCGACGGGAGGTCCCAGCGATAGagg > 2:2443276/1‑99 (MQ=16)
tCGAAACT.GGTATG.GATCTG..GCGCAAACGG..AAAGTCT.G..TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCGGCGTGAGTTGCCAGTGATAGACGc < 1:4627997/101‑1 (MQ=255)
cGAAACT.GGTATG.GATCTG..GCGCAAACGG..AAAGTCT.G..TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCGGCGTGAGTTGCCAGTGATAGACGcc < 1:2080246/101‑1 (MQ=255)
gAAACT.GGTATG.GATCTG..GCGCAAACGG..AAAGTCT.G..TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCGGCGTGAGTTGCCAGTGATAGACGCCg > 1:3327564/1‑101 (MQ=255)
aaaCT.GGTATG.GATCTG..GCGCAAACGG..AAAGTCT.G..TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCGGCGTGAGTTGCCAGTGATAGACGCCGt > 2:1840929/1‑101 (MQ=255)
aaaCT.GGTATG.GATCTG..GCGCAAACGG..AAAGTCT.G..TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCGGCGTGAGTTGCCAGTGATAGACGCCGt > 2:3326507/1‑101 (MQ=255)
aCT.GGTATG.GATCTG..GCGCAAACGG..AAAGTCT.G..TCGTCGCTCCCCCCGCGGGGGCGCGGATCGAAACCTGCGGCGTGAGTTGCCAGTGATAGACGCCGTgg > 1:2971400/1‑101 (MQ=255)
t.GGTATG.GATCTG..GCGCAAACGG..AAAGTCT.G..TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCGGCGTGAGTTGCCAGTGATAGACGCCGTGGAc > 1:1873195/1‑101 (MQ=255)
tATG.GATCTG..GCGCAAACGG..AAAGTCT.G..TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCGGCGTGAGTTGCCAGTGATAGACGCCGTGGACGTc < 2:4305053/101‑1 (MQ=255)
aTG.GATCTG..GCGCAAACGG..AAAGTCT.G..TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCGGCGTGAGTTGCCAGTGATAGACGCCGTGGACGTCg < 2:2016822/101‑1 (MQ=255)
aTCTG..GCGCAAACGG..AAAGTCT.G..TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCGGCGTGAGTTGCCAGTGATAGACGCCGTGGACGTCGCTcc < 1:3425773/101‑1 (MQ=255)
tG..GCGCAAACGG..AAAGTCT.G..TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCGGCGTGAGTTGCCAGTGATAGACGCCGTGGACGTCGCTccccc < 2:3862515/101‑1 (MQ=255)
g..gCGCAAACGG..AAAGTCT.G..TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCGGCGTGAGTTGCCAGTGATAGACGCCGTGGACGTCGCTcccccc < 1:4949833/101‑1 (MQ=255)
g..gCGCAAACGG..AAAGTCT.G..TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCGGCGTGAGTTGCCAGTGATAGACGCCGTGGACGTCGCTcccccc > 2:4673375/1‑101 (MQ=255)
g..gCGCAAACGG..AAAGTCT.G..TCGTCGCCCCCCCCGCGGGGGCGTGGATCGAAACCTGCGGCGTGAGTTGCCAGTGATAGACGCCGTGGACGTCGCTcccccc < 1:2115748/101‑1 (MQ=255)
cgcAAACGG..AAAGTCT.G..TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCGGCGTGAGTTGCCAGTGATAGACGCCGTGGACGTCGCTCCCCCcgc < 1:4801551/101‑1 (MQ=255)
cAAACGG..AAAGTCT.G..TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCGGCGTGAGTTGCCAGTGATAGACGCCGTGGACGTCGCTCCCCCCGCgg > 2:3678384/1‑101 (MQ=255)
aaCGG..AAAGTCT.G..TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCGGCGTAAGTTGCCAGTGATAGACGCCGTGGACGTCGCTCCCCCCGCgggg < 1:4029958/101‑1 (MQ=255)
|
GGGCGTGGATCGAAACATCTGCATGTAGTCGGCGGGCAGTTCGAGCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATG.GATCTG..GCGCAAACGG..AAAGTCT.G..TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCGGCGTGAGTTGCCAGTGATAGACGCCGTGGACGTCGCTCCCCCCGCGGGG > NC_014034/1395649‑1395849
Base quality scores:
ATCG
< 3 ≤
ATCG
< 20 ≤
ATCG
< 27 ≤
ATCG
< 33 ≤
ATCG
< 40 ≤
ATCG
|