| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 1,396,025 | C→T | 13.8% | intergenic (+837/‑94) | RCAP_rcc01306 → / → RCAP_rcc01307 | Cas2 family CRISPR‑associated protein/hypothetical protein |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 1,396,025 | 0 | C→T | 13.8% | 112.3 ‑1.2 ‑0.5 | 296 | intergenic (+837/‑94) | RCAP_rcc01306/RCAP_rcc01307 | Cas2 family CRISPR‑associated protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): new base (16/25): ref base (122/133): total (138/158) | ||||||||||
| Fisher's exact test strand distribution p-value = 3.16e-01 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 3.23e-01 | ||||||||||
Only 100 of 317 total aligned reads displayed.
CGAAACGATGCGTTCATGGCCTACGTCGGGCAGTGGACTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC..ACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTGAGACGGCTGTCGCTCCCCCCGCGGGGGCGTGGATC > NC_014034/1395925‑1396125
|
gAAACGATGCGTTCATGGCCTACGTCGGGCAGTGGACTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC..ACGCCt > 2:1564135/1‑101 (MQ=255)
gAAACGATGCGTTCATGGCCTACGTCGGGCAGTGGACTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC..ACGCCt > 1:1292857/1‑101 (MQ=255)
aaaCGATGCGTTCATGGCCTACGTCGGGCAGTGGACTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC..ACGCCTg < 1:170377/101‑1 (MQ=255)
aCGATGGGTTCATGGCCTACGTCGGGCAGTGGACTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC..ACGCCTGc.c < 1:719728/101‑1 (MQ=255)
aCGATGCGTTCATGGCCTACGTCGGGCAGTGGACTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC..ACGCCTGc.c < 2:2518832/101‑1 (MQ=255)
gCGTTCATGGCCTACGTCGGGCAGTGGACTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC..ACGCCTGC.CGC..GTc < 1:4367512/101‑1 (MQ=255)
cGTTCATGGCCTACGTCGGGCAGTGGACTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC..ACGCCTGC.CGC..GTCg > 2:544082/1‑101 (MQ=255)
cGTTCATGGCCTACGTCGGGCAGTGGACTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC..ACGCCTGC.CGC..GTCg < 2:4836104/101‑1 (MQ=255)
gTTCATGGCCTACGTCGGGCAGTGGACTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC..ACGCCTGC.CGC..GTCGc > 2:2594215/1‑101 (MQ=255)
gTTCATGGCCTACGTCGGGCAGTGGACTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC..ACGCCTGC.CGC..GTCGc > 1:4878176/1‑101 (MQ=255)
ttCATGGCCTACGTCGGGCAGTGGACTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC..ACGCCTGC.CGC..GTCGCt < 2:2017453/101‑1 (MQ=255)
tGGCCTACGTCGGGCAGTGGACTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC..ACGCCTGC.CGC..GTCGCTcccc < 1:1766122/101‑1 (MQ=255)
ggCCTACGTCGGGCAGTGGACTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC..ACGCCTGC.CGC..GTCGCTccccc < 2:4269668/101‑1 (MQ=255)
ggCCTACGTCGGGCAGTGGACTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC..ACGCCTGC.CGC..GTCGCTccccc > 1:2956853/1‑101 (MQ=255)
gCCTACGTCGGGCAGTGGACTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC..ACGCCTGC.CGC..GTCGCTcccccc > 1:2371862/1‑101 (MQ=255)
gCCTACGGCGGGCAGTGGACTGGTCGCCCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC..ACGCCTGC.CGC..GTCGCTcccccc < 1:1412277/101‑1 (MQ=255)
cTACGTCGGGCAGTGGACTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC..ACGCCTGC.CGC..GTCGCTCCCCCcgc < 2:19189/101‑1 (MQ=255)
tACGTCGGGCAGTGGACTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC..ACGCCTGC.CGC..GTCGCTCCCCCcgcg > 1:661131/1‑101 (MQ=255)
cGTCGGGCAGTGGACTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC..ACGCCTGC.CGC..GTCGCTCCCCCCGCggg > 2:3292698/1‑101 (MQ=255)
gTCGGGCAGTGGACTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC..ACGCCTGC.CGC..GTCGCTCCCCCCGCgggg > 1:2618753/1‑101 (MQ=255)
gTCGGGCAGTGGACTGGGCGCTCCCCCCGCGGGGGCGTGGATCGAAACTTGCCTTCGATCCGCACTGGCCGC..ACGCATGC.CGC..GGCGGTCCCCCCGCgggg > 2:2755143/1‑101 (MQ=25)
cGGGCAGTGGACTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC..ACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGc > 2:3828170/1‑101 (MQ=255)
gggCAGTGGACTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC..ACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCg > 1:1197335/1‑101 (MQ=255)
gggCAGTGGACTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC..ACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCg > 2:388777/1‑101 (MQ=255)
gCAGTGGACTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC..ACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTg > 1:1632106/1‑101 (MQ=255)
cAGTGGACTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC..ACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTgg < 1:3092989/101‑1 (MQ=255)
attgcacgggTCGCTCCCCCCGCGGGGGCGTGGATTGAAACTCTCCCTCGATCCGCGCTTGCCTC..ACGCCTGC.CGC..GTTGCTCCCCCCGCGGGGGCGTGGa < 2:769882/93‑1 (MQ=37)
tctgcgcggTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGGCCTCGATCCG.GTCAGCCTC...GTATTGCGCGCTGGTCGCTCCCCCCGCGGGGGCGTGGa < 2:3547280/94‑1 (MQ=2)
gctgcgcggTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGGCCTCGATCCG.GTCAGCCTC...GTATTGCGCGCTGGTCGCTCCCCCCGCGGGGGCGTGGa < 2:102103/94‑1 (MQ=2)
tGGACTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC..ACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATc < 2:3671012/101‑1 (MQ=255)
gggACTGGTCGCCCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC..ACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATc < 2:4412628/100‑1 (MQ=255)
ctgcgcggTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGGCCTCGATCCG.GTCAGCCTC...GTATTGCGCGCTGGTCGCTCCCCCCGCGGGGGCGTGGAt < 1:1861376/95‑1 (MQ=9)
tgcgcggTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGGCCTCGATCCG.GTCAGCCTC...GTATTGCGCGCTGGTCGCTCCCCCCGCGGGGGCGTGGATc < 2:2176019/96‑1 (MQ=9)
tgcgcggTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGGCCTCGATCCG.GTCAGCCTC...GTATTGCGCGCTGGTCGCTCCCCCCGCGGGGGCGTGGATc < 1:2058501/96‑1 (MQ=9)
ggACTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGCCATCGATCCGCGCTTGCCTC..ACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCg > 2:4480835/1‑101 (MQ=255)
gcgcggTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGGCCTCGATCCG.GTCAGCCTC...GTATTGCGCGCTGGTCGCTCCCCCCGCGGGGGCGTGGATCg > 2:1056044/5‑101 (MQ=2)
gcTGGTCGCGCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC..ACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGaa < 1:3858152/100‑1 (MQ=255)
aCTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC..ACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGaa > 1:538718/1‑101 (MQ=255)
gcggTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGGCCTCGATCCG.GTGAGCCTC...GTATTGCGCGCTGGTCGCTCCCCCCGCGGGGGCGTGGATCGag > 1:982807/3‑100 (MQ=2)
cTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC..ACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGaaa > 2:597499/1‑101 (MQ=255)
cTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC..ACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGGGGATCGaaa > 2:1689723/1‑101 (MQ=255)
tGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC..ACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGGGGATCGAAAc > 1:4741052/1‑101 (MQ=255)
ggTCCCTCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC..ACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACa < 2:895575/101‑1 (MQ=255)
cGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGGCCTCGATCCG.GTCAGCCTC...GTATTGCGCGCTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAActtg < 1:44901/101‑4 (MQ=2)
cGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC..ACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGgc > 1:2156435/1‑101 (MQ=255)
gccccccccGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC..ACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGgcg < 2:3065657/98‑1 (MQ=255)
gCTCCCCCCGCGGGGGCGTGGATCGAAACTCGGCCTCGATCCG.GTCAGCCTCGTATTCCGCG.CTG..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAActtga > 2:4176948/1‑97 (MQ=2)
gCTCCCCCCGCGGGGGCGTGGATCGAAACTCGGCCTCGATCCG.GTCAGCCTC...GTATTGCGCGCTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAActtga < 2:4002224/101‑5 (MQ=2)
gCTCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC..ACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGgcg > 1:3183678/1‑101 (MQ=255)
gCTCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC..ACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGgcg < 2:1467084/101‑1 (MQ=255)
cTCCCCCCGCGGGGGCGTGGATCGAAACTCGGCCTCGATCCG.GTCAGCCTC...GTATTGCGCGCTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAActtgat < 2:1252050/101‑6 (MQ=2)
tCCCCCCGCGGGGGCGTGGATCGAAACTCGGCCTCGATCCG.GTCAGCCTC...GTATTGCGCGCTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAActtgatg > 2:4358440/1‑95 (MQ=2)
ccccccGCGGGGGCGTGGATCGAAACTCGGCCTCGATCCG.GTCAGCCTC...GTATTGCGCGCTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAActtgatga > 1:4014724/1‑94 (MQ=2)
ccccccGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC..ACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCac > 2:1297279/1‑100 (MQ=255)
ccccccGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC..ACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCAt > 1:3942142/1‑101 (MQ=255)
ccccGCGGGGGCTGGGATCGAAACTCGCCCTCGCTCCGCGCTTTCCTC..ACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCt < 1:2286803/101‑1 (MQ=38)
ccccGCGGGGGCGTGGATCGAAACTCGGCCTCGATCCG.GTCAGCCTC...GTATTGCGCGCTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAActtgatgacc < 1:3656896/101‑10 (MQ=2)
ccccGCGGGGGCGTGGATCGAAACTCGGCCTCGATCCG.GTCAGCCTC...GTATTGCGCGCTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAActtgatgacc > 1:617953/1‑92 (MQ=2)
ccccGCGGGGGCGTGGATCGAAACTCGGCCTCGATCCG.GTCAGCCTC...GTATTGCGCGCTGGTCGCTCCCCCCGCGGGGGCGGGGATCGAAActtgatgacc > 1:3501137/1‑92 (MQ=2)
ccccGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC..ACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCt < 2:4444974/101‑1 (MQ=255)
cccGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC..ACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTg < 2:1350545/101‑1 (MQ=255)
ccGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC..ACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGa < 1:1564265/101‑1 (MQ=255)
ggggCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC..ACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGtat > 1:3306695/1‑101 (MQ=255)
ggggCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC..ACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGtat > 1:3623863/1‑101 (MQ=255)
ggggCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC..ACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGtat < 2:1180460/101‑1 (MQ=255)
ggggCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC..ACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGtat < 1:4951936/101‑1 (MQ=255)
gggCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC..ACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGtata > 1:27581/1‑101 (MQ=255)
gggCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC..ACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGtata > 1:88183/1‑101 (MQ=255)
ttccgatctCGAAACTCGCCCGCGATCCGCGCTTGCCTC..ACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTatat < 2:3224492/93‑1 (MQ=255)
ggCGTGGATCGAACCTCGCCCTCGATCCGCGCTTGCCTC..ACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTatat < 1:4589430/101‑1 (MQ=255)
ggCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC..ACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTatat < 1:31227/101‑1 (MQ=255)
gCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC..ACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATg > 2:2400665/1‑101 (MQ=255)
gCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC..ACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATg < 2:1104671/101‑1 (MQ=255)
gCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC..ACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATg < 2:3941850/101‑1 (MQ=255)
cGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC..ACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGc > 1:4245557/1‑101 (MQ=255)
tGGATCGAACCTCGCCCTCGATCCGCGCTTGCCTC..ACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGccc < 2:1735304/101‑1 (MQ=255)
aTCGAAACTCGCCCTCGATCCGCGCTTGCCTC..ACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGt < 1:1107337/101‑1 (MQ=255)
tCGAAACTCGCCCTCGATCCGCGCTTGCCTC..ACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTg < 1:2218191/101‑1 (MQ=255)
tCGAAACTCGCCCTCGATCCGCGCTTGCCTC..ACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTg < 2:2705881/101‑1 (MQ=255)
aaccTCGCCCTCGATCCGCGCTTGCCTC..ACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTgaga < 2:3413377/98‑1 (MQ=255)
aaaCTCGCCCTCGATCCGCGCTTGCCTC..ACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTgaga > 1:1043369/1‑101 (MQ=255)
aaaCTCGCCCTCGATCCGCGCTTGCCTC..ACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTgaga < 2:4588459/101‑1 (MQ=255)
aaaCTCGCCCTCGATCCGCGCTTGCCTC..ACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTgaga < 2:2290672/101‑1 (MQ=255)
aaCTCGCCCTCGATCCGCGCTTGCCTC..ACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTGAGAc < 1:1940407/101‑1 (MQ=255)
tCGCCCTCGATCGGCGCTTGCCTC..ACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAACCAGGAGCATCTGATGTATATGCCCGGGGAGACGGc > 1:2747217/1‑101 (MQ=38)
cGCCCTCGATCCGCGCTTGCCTC..ACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTGAGACGGCt > 1:1218898/1‑101 (MQ=255)
cTCGATCTGCGCTTGCCTC..ACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGCGGATCGAAACAGTTGCCTCTGATGTGTATGCCCGGCGTGACGGCCGTcc > 2:4721913/1‑100 (MQ=25)
aTCCGCGCTTGCCTC..ACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCGTCTGATGTATATGCCCGGTGAGACGGCTGTCGCTcc > 1:4546342/1‑101 (MQ=255)
ttGCCTC..ACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTGAGACGGCTGTCGCTCCCCCCGCgg > 1:3381031/1‑101 (MQ=255)
ttGCCTC..ACGCCTAC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTGAGACGGCTGTCGCTCCCCCCGCgg < 1:2490737/101‑1 (MQ=255)
gCCTC..ACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTGAGACGGCTGTCGCTCCCCCCGCgggg > 1:29935/1‑101 (MQ=255)
cTC..ACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTGAGACGGCTGTCGCTCCCCCCGCGGGGGc < 1:4411657/101‑1 (MQ=255)
cTC..ACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTGAGACGGCTGTCGCTCCCCCCGCGGGGGc < 2:73282/101‑1 (MQ=255)
c..ACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTGAGACGGCTGTCGCTCCCCCCGCGGGGGCgg > 2:1379114/1‑100 (MQ=255)
c..ACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTGAGACGGCTGTCGCTCCCCCCGCGGGGGCGt < 2:5029388/101‑1 (MQ=255)
c..ACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTGAGACGGCTGTCGCTCCCCCCGCGGGGGCGt > 2:4948162/1‑101 (MQ=255)
ccGCTTGC.CTC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTGAGACGGCTGTCGCTCCCCCCGCGGGGGCGTg < 2:1781461/100‑1 (MQ=255)
gCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTGAGACGGCTGTCGCTCCCCCCGCGGGGGCGTGGa < 1:1786005/101‑1 (MQ=255)
ccTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTGAGACGGCTGTCGCTCCCCCCGCGGGGGCGTGGAt < 2:2957522/101‑1 (MQ=255)
cTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTGAGACGGCTGTCGCTCCCCCCGCGGGGGCGTGGATc > 2:822995/1‑101 (MQ=255)
|
CGAAACGATGCGTTCATGGCCTACGTCGGGCAGTGGACTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC..ACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTGAGACGGCTGTCGCTCCCCCCGCGGGGGCGTGGATC > NC_014034/1395925‑1396125
Base quality scores:
ATCG
< 3 ≤
ATCG
< 18 ≤
ATCG
< 26 ≤
ATCG
< 33 ≤
ATCG
< 40 ≤
ATCG
|