BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_014034	1,396,940	G→T	7.2%	L274L (CTG→TGT)	RCAP_rcc01307 →	hypothetical protein

Read alignment evidence...
	seq id	position		change	freq	score	reads	annotation	genes	product
*	NC_014034	1,396,940	0	G→T	7.2%	60.6 0.0 ‑0.8	411	L274L (CTG→CTT)	RCAP_rcc01307	hypothetical protein
Reads supporting (aligned to +/- strand): new base (15/15): ref base (197/184): total (212/199)
Fisher's exact test strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 1.70e-01

Only 100 of 457 total aligned reads displayed.


CTCCCCCCGCGGGGGCGTGGATCGAAACCGGTCCAGAGATAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.GCCT.GCGCG.G..C.CGC.A.TCGGCT.TC.CGC.CTG..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCGTCGTTGGTCAGCCGGACGATGTCCGTCGCTC  >  NC_014034/1396840‑1397040


cTCCCCCCGCGGGGGCGTGGATCGAAACCGGTCCAGAGATAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.GCCT.g                                                                                                                  <  1:1041585/101‑1 (MQ=255)


cTCCCCCCGCGGGGGCGTGGATCGAAACCGGTCCAGAGATAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.GCCT.g                                                                                                                  <  2:813462/101‑1 (MQ=255)


cTCCCCCCGCGGGGGCGTGGATCGAAACCGGTCCAGAGATAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.GCCT.g                                                                                                                  >  2:4559144/1‑101 (MQ=255)


 cccccccGCGGGGGCGTGGATCGAAACCGGTCCAGAGATAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.GCCT.gc                                                                                                                 <  2:3217378/100‑1 (MQ=255)


  ccccccGCGGGGGCGTGGATCGAAACCGGTCCAGAGATAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.GCCT.gcg                                                                                                                >  2:2389414/1‑101 (MQ=255)


      ccGCGGGGGCGTGGATCGAAACCGGTCCAGAGATAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGGAACA.GCCT.GCGCG.G..c                                                                                                         >  2:300366/1‑101 (MQ=255)


         cgGGGGCGTGGATCGAAACCGGTCCAGAGATAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.GCCT.GCGCG.G..C.CGc                                                                                                     >  2:2195016/1‑101 (MQ=255)


          gggggCGTGGATCGAAACCGGTCCAGAGATAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.GCCT.GCGCG.G..C.CGC.a                                                                                                   >  1:703835/1‑101 (MQ=255)


          gggggCGTGGATCGAAACCGGTCCAGAGATAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.GCCT.GCGCG.G..C.CGC.a                                                                                                   >  1:2959220/1‑101 (MQ=255)


               cGTGGATCGAAACCGGTCCAGAGATAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.GCCT.GCGCG.G..C.CGC.A.TCGGc                                                                                             >  2:3322895/1‑101 (MQ=255)


               cGTGGATCGAAACCGGTCCAGAGATAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.GCCT.GCGCG.G..C.CGC.A.TCGGc                                                                                             >  1:2307705/1‑101 (MQ=255)


                gTGGATCGAAACCGGTCCAGAGATAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.GCCT.GCGCG.G..C.CGC.A.TCGGCt                                                                                            <  1:2436319/101‑1 (MQ=255)


                gTGGATCGAAACCGGTCCAGAGATAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGAGGCGTGGATCGAAACA.GCCT.GCGCG.G..C.CGC.A.TCGGCt                                                                                            >  1:3517755/1‑101 (MQ=255)


                 tGGATCGAAACCGGTCCAGAGATAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.GCCT.GCGCG.G..C.CGC.A.TCGGCt.t                                                                                          >  2:958840/1‑101 (MQ=255)


                  ggATCGAAACCGGTCCAGAGATAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.GCCT.GCGCG.G..C.CGC.A.TCGGCT.Tc                                                                                         >  2:2689207/1‑101 (MQ=255)


                      cGAAACCGGTCCAGAGATAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.GCCT.GCGCG.G..C.CGC.A.TCGGCT.TC.CGc.c                                                                                   >  1:4975406/1‑101 (MQ=255)


                        aaaCCGGTCCAGAGATAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.GCCT.GCGCG.G..C.CGC.A.TCGGCT.TC.CGC.CTg                                                                                 >  2:1988327/1‑101 (MQ=255)


                         aaCCGGTCCAGAGATAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.GCCT.GCGCG.G..C.CGC.A.TCGGCT.TC.CGC.CTG..c                                                                              >  1:4145564/1‑101 (MQ=255)


                         aaCCGGTCCAGAGATAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.GCCT.GCGCG.G..C.CGC.A.TCGGCT.TC.CGC.CTG..c                                                                              <  1:2043143/101‑1 (MQ=255)


                         aaCCGGTCCAGAGATAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.GCCT.GCGCG.G..C.CGC.A.TCGGCT.TC.CCC.CCG..c                                                                              >  1:3920367/1‑101 (MQ=255)


                          aCCGGTCCAGAGATAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.GCCT.GCGCG.G..C.CGC.A.TCGGCT.TC.CGC.CTG..Cg                                                                             >  2:1096149/1‑101 (MQ=255)


                                ccAGAGATAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.GCCT.GCGCG.G..C.CGC.A.TCGGCT.TC.CGC.CTG..CGTG.GTCg                                                                      >  1:440449/1‑101 (MQ=255)


                                  agagATAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.GCCT.GCGCG.G..C.CGC.A.TCGGCT.TC.CGC.CTG..CGTG.GTCGCt                                                                    <  2:3512569/101‑1 (MQ=255)


                                  agagATAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.GCCT.GCGCG.G..C.CGC.A.TCGGCT.TC.CGC.CTG..CGTG.GTCGCt                                                                    >  1:1299497/1‑101 (MQ=255)


                                        aGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.GCCT.GCGCG.G..C.CGC.A.TCGGCT.TC.CGC.CTG..CGTG.GTCGCTcccccc                                                              >  2:3407247/1‑101 (MQ=255)


                                        aGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.GCCT.GCGCG.G..C.CGC.A.TCGGCT.TC.CGC.CTG..CGTG.GTCGCTcccccc                                                              <  2:228429/101‑1 (MQ=255)


                                        aGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.GCCT.GCGCG.G..C.CGC.A.TCGGCT.TC.CGC.CTG..CGTG.GTCGCTcccccc                                                              <  2:5028414/101‑1 (MQ=255)


                                         gACCGCGCGGACCTCCTCAGACGTCGCTCCCGCCGCGGGGGCGTGGATCGAAACA.GCCT.GCGCG.G..C.CGC.A.TCGGCT.TC.CGC.CTG..CGTG.GTCGCTCCCCCcg                                                             >  1:4485513/1‑101 (MQ=255)


                                                cgGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.GCCT.GCGCG.G..C.CGC.A.TCGGCT.TC.CGC.CTC..CGTG.GTCGCTCCCCCCGCGGGGGc                                                      >  1:2130045/1‑101 (MQ=255)


                                                  gccctcctCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.GCCT.GCGCG.G..C.CGC.A.TCGGCT.TC.CGC.CTG..CGTG.GTCGCTCCCCCCGCGGGGGCGt                                                    <  2:3633955/99‑1 (MQ=255)


                                                  gACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.GCCT.GCGCG.G..C.CGC.A.TCGGCT.TC.CGC.CTG..CGTG.GTCGCTCCCCCCGCGGGGGCGt                                                    <  2:1809747/101‑1 (MQ=255)


                                                     tcgcggttgcGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATGGCTATGGCG.G..C.AGT.G.TCAGGT.T..TTC.CAG..CGGC.GTCGCTCCCCCCGCGGGGGCGTgg                                                  <  2:1455824/92‑1 (MQ=0)


                                                     tcgcggttgcGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATGGCTATGGCG.G..C.AGT.G.TCAGGT.T..TTC.CAG..CGGC.GTCGCTCCCCCCGCGGGGGCGTgg                                                  <  2:409452/92‑1 (MQ=0)


                                                      tcctcAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.GCCT.GCGCG.G..C.CGC.A.TCGGCT.TC.CGC.CTG..CGTG.GTCGCTCCCCCCCCGGGGGCCTgggt                                                >  1:4765541/1‑99 (MQ=255)


                                                       tggccccgggcGCTCCCCCCGCGGGGGCGTGGATCGAAACA..ACT.GACC.....C.GGC.A.ACGGCC.TA.TGCGCTGGACGTG.GTCGCTCCCCCCGCGGGGGCGTGGATc                                               <  1:29207/91‑1 (MQ=2)


                                                       tggccccggTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA..ACT.GACC.....C.GGC.A.ACGGCC.TA.TGCGCTGGACGTG.GTCGCTCCCCCCGCGGGGGCGTGGATc                                               <  1:3217404/93‑1 (MQ=2)


                                                       tcaccactgTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC..GCTG.GCGCGCG..C.CGC.G.CCGGATCTT.TGT.CTG..CGCG.GTCGCTCCCCCCGCGGGGGCGTGGAt                                                <  1:1344756/93‑1 (MQ=9)


                                                       cctcAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.GCCT.GCGCG.G..C.CGC.A.TCGGCT.TC.CGC.CTG..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATc                                               <  1:936471/101‑1 (MQ=255)


                                                       cctcAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.GCCT.GCGCG.G..C.CGC.A.TCGGCT.TC.CGC.CTG..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATc                                               <  1:579960/101‑1 (MQ=255)


                                                        ctcAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.GCCT.GCGCG.G..C.CGC.A.TCGGCT.TC.CGC.CTG..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCg                                              <  2:1258413/101‑1 (MQ=255)


                                                        cggttgcGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATGGCTATGGCG.G..C.AGT.G.TCAGGT.T..TTC.CAG..CGGC.GTCGCTCCCCCCGCGGGGGCGTGGATc                                               <  2:4939102/95‑1 (MQ=2)


                                                        cggttgcGTCGCGCCCCCCGCGGGGGCGTGGATCGAAACATGGCTATGGCG.G..C.AGT.G.TCAGGT.T..TTC.CAG..CGGC.GTCGCTCCCCCCGCGGGGGCGTGGATc                                               <  1:1431807/95‑1 (MQ=2)


                                                         tcAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.GCCT.GCGCG.G..C.CGC.A.TCGGCT.TC.CGC.CTG..CGTG.GTCGCTCCCCCCGCGGGGGCGGGGATCGa                                             >  1:3802797/1‑101 (MQ=255)


                                                         ggttgcGTCGCGCCCCCCGCGGGGGCGTGGATCGAAACATGGCTATGGCG.G..C.AGT.G.TCAGGT.T..TTC.CAG..CGGC.GTCGCTCCCCCCGCGGGGGCGTGGATCg                                              <  2:1666920/96‑1 (MQ=2)


                                                         aacactgTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC..GCTG.GCGCGCG..C.CGC.G.CCGGATCTT.TGT.CTG..CGCG.GTCGCTCCCCCCGCGGGGGCGTGGATCg                                              >  1:4290267/7‑101 (MQ=9)


                                                          cAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.GCCT.GCGCG.G..C.CGC.A.TCGGCT.TC.CGC.CTG..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGaa                                            <  2:3157727/101‑1 (MQ=255)


                                                          cAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.GCCT.GCGCG.G..C.CGC.A.TCGGCT.TC.CGC.CTG..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGaa                                            <  1:1845182/101‑1 (MQ=255)


                                                           gccggTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GCGT.GCGCG.C..CATGA.ATTCATCG.AG.CGC.CAT..CGAGCGTCGCTCCCCCCGCGGGGGCGTGGATCg                                              >  2:4277650/5‑101 (MQ=2)


                                                           gcccGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GCGT.GCGCG.C..CATGA.ATTCATCG.AG.CGC.CAT..CGAGCGTCGCTCCCCCCGCGGGGGCGTGGATCg                                              >  2:4175570/4‑101 (MQ=2)


                                                            tgcGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATGGCTATGGCG.G..C.AGT.G.TCAGGT.T..TTC.CAG..CGGC.GGCGCTCCCCCCGCGGGGGCGTGGATCGaaa                                           >  2:290430/3‑101 (MQ=2)


                                                             cggTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA..ACT.GACC.....C.GGC.A.ACGGCC.TA.TGCGCTGGACGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAAct                                         >  2:3058242/3‑100 (MQ=2)


                                                              tgTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC..GCTG.GCGCGCG..C.CGC.G.CCGGATCTT.TGT.CTG..CGCG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAAct                                         >  1:1780662/2‑100 (MQ=9)


                                                              cGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GCGT.GCGCG.C..CATGA.ATTCATCG.AG.CGC.CAT..CGAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGaaa                                           <  1:2838087/101‑1 (MQ=2)


                                                               gTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.GCCT.GCGCG.G..C.CGC.A.TCGGCT.TC.CGC.CTG..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGGTCGAAACATc                                       >  2:1004889/1‑101 (MQ=255)


                                                               gTCGCCCCCCCCGCGGGGGCGTGGATCGAAACA.GCCT.GCGCG.G..C.CGC.A.TCGGCT.TC.CGC.CTG..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATc                                       <  2:4842033/101‑1 (MQ=255)


                                                               gTCGCCCCCCCCGCGGGGGCGTGGATCGAAACA.CCCT.GCGCC.G..C.AGC.G.AGTGCG.TCTGGA.ACA..GGAT.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAActa                                        <  2:4434227/101‑3 (MQ=2)


                                                                tCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GCGT.GCGCG.C..CATGA.ATTCATCG.AG.CGC.CAT..CGAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACa                                         <  2:3735872/101‑1 (MQ=2)


                                                                tCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.GCCT.GCGCG.G..C.CGC.A.TCGGCT.TC.CGC.CTG..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCa                                      <  1:2667094/101‑1 (MQ=255)


                                                                tCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.GCCT.GCGCG.G..C.CGC.A.TCGGCT.TC.CGC.CTG..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCa                                      >  1:4860951/1‑101 (MQ=255)


                                                                 cGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GCGT.GCGCG.C..CATGA.ATTCATCG.AG.CGC.CAT..CGAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACac                                        <  2:1704308/101‑2 (MQ=2)


                                                                 cGCTCCCCCCGCGGGGGCGTGGATCGAAACA.GCCT.GCGCG.G..C.CGC.A.TCGGCT.TC.CGC.CTG..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAg                                     >  2:1351571/1‑101 (MQ=255)


                                                                 cGCTCCCCCCGCGGGGGCGTGGATCGAAAC..GCTG.GCGCGCG..C.CGC.G.CCGGATCTT.TGT.CTG..CGCG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAActcgg                                      >  1:2176174/1‑97 (MQ=9)


                                                                 cGCTCCCCCCGCGGGGGCGTGGATCGAAAC..GCTG.GCGCGCG..C.CGC.G.CCGGATCTT.TGT.CTG..CGCG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAActcgg                                      >  1:3678483/1‑97 (MQ=9)


                                                                 cGCTCCCCCCGCGGGGGCGTGGATCGAAAC..GCTG.GCGCGCG..C.CGC.C.CCGGATCTT.TGT.CTG..CGCG.GGCGCTCCCCCCGCGGGGGCGTGGATCGAAActcgg                                      >  1:2235468/1‑97 (MQ=9)


                                                                 cGCCCCCCCCGCGGGGGCGTGGATCGAAACT.TGAT.GCCCA.GATC.CGCAA.TCGGC...C.GGG.CTC..GATC.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAAcctat                                      <  2:2876833/101‑5 (MQ=0)


                                                                  gCTCCCCCCGCGGGGGCGTGGATCGAAACT.GCGT.GCGCG.C..CATGA.ATTCATCG.AG.CGC.CAT..CGAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACacc                                       <  1:1913275/101‑3 (MQ=2)


                                                                  gCTCCCCCCGCGGGGGCGTGGATCGAAACT.GCGT.GCGCG.C..CATGA.ATTCATCG.AG.CGC.CAT..CGAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACacc                                       >  1:4938516/1‑99 (MQ=2)


                                                                  gCTCCCCCCGCGGGGGCGTGGATCGAAACA..ACT.GACC.....C.GGC.A.ACGGCC.TA.TGCGCTGGACGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAActacacc                                    >  2:4741744/1‑95 (MQ=2)


                                                                  gCTCCCCCCGCGGGGGCGTGGATCGAAAC..GCTG.GCGCGCG..C.CGC.G.CCGGATCTT.TGT.CTG..CGCG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAActcggc                                     >  1:4218476/1‑96 (MQ=9)


                                                                   cTCCCCCCGCGGGGGCGTGGATCGAAACT.GCGT.GCGCG.C..CATGA.ATTCATCG.AG.CGC.CAT..CGAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCa                                      <  1:4542812/101‑1 (MQ=2)


                                                                   cTCCCCCCGCGGGGGCGTGGATCGAAACT.GCGT.GCGCG.C..CATGA.ATTCATCG.AG.CGC.CAT..CGAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCa                                      <  1:3411648/101‑1 (MQ=2)


                                                                   cTCCCCCCGCGGGGGCGTGGATCGAAACA.GCCT.GCGCG.G..C.CGC.A.TCGGCT.TC.CGC.CTG..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCATCt                                   >  2:1133706/1‑101 (MQ=255)


                                                                    tCCCCCCGCGGGGGCGTGGATCGAAACA.CCCG.GCGCC.G..C.AGC.G.AGTGCG.TC.TGA.ACA..GGAT.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAActatgctgg                                  >  2:2807018/1‑93 (MQ=2)


                                                                    tCCCCCCGCGGGGGCGTGGATCGAAAC..GCTG.GCGCGCG..C.CGC.G.CCGGATCTT.TGT.CTG..CGCG.GTCGCTCCCCCCGCGGGGGGGTGGATCGAAActcggcct                                   >  1:4080572/1‑94 (MQ=9)


                                                                    tCCCCCCGCGGGGGCGTGGATCGAAAC..GCTG.GCGCGCG..C.CGC.G.CCGGATCTT.TGT.CTG..CGCG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAActcggcct                                   >  2:4686230/1‑94 (MQ=9)


                                                                     ccccccGCGGGGGCGTGGATCGAAACT.GCGT.GCGCG.C..CATGA.ATTCATCG.AG.CGC.CAT..CGAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCaat                                    <  1:1519451/101‑3 (MQ=2)


                                                                     ccccccGCGGGGGCGTGGATCGAAACT.GCGT.GCGCG.C..CATGA.ATTCATCG.AG.CGC.CAT..CGAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCaat                                    <  1:313218/101‑3 (MQ=2)


                                                                     ccccccGCGGGGGCGTGGATCGAAACA..ACT.GACC.....C.GGC.A.ACGGCC.TA.TGCGCTGGACGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAActacaccggg                                 >  1:1484403/1‑92 (MQ=2)


                                                                     ccccccGCGGGGGCGTGGATCGAAAC..GCTG.GCGCGCG..C.CGC.G.CCGGATCTT.TGT.CTG..CGCG.GTCGCTCCCCCCGCGGGGGCGTGGCTCGAAActcggcctc                                  >  2:664684/1‑93 (MQ=9)


                                                                       ccccGCGGGGGCGTGGATCGAAACT.GCGT.GCGCG.C..CATGA.ATTCATCG.AG.CGC.CAT..CGAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGaaaaaccaatgc                                  >  2:2444389/1‑92 (MQ=2)


                                                                       ccccGCGGGGGCGTGGATCGAAACATGGCTATGGCG.G..C.AGT.G.TCAGGT.T..TTC.CAG..CGGC.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAAcccgccacgtc                                >  1:1657973/1‑91 (MQ=2)


                                                                         ccGCGGGGGCGTGGATCGAAACT.GCGT.GCGCG.C..CATGA.ATTCATCG.AG.CGC.CAT..CGAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCaatgccg                                <  1:1141240/101‑7 (MQ=0)


                                                                          cgcgGGGGCGTGGATCGAAACA.GCCT.GCGCG.G..C.CGC.A.TCGGCT.TC.CGC.CTG..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCGTCGtt                            <  1:3333269/101‑1 (MQ=255)


                                                                            cgGGGGCGTGGATCGAAACA.GCCT.GCGCG.G..C.CGC.A.TCGGCT.TC.CGC.CTG..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCGTCGTTgg                          >  1:639669/1‑101 (MQ=255)


                                                                             gggggCGTGGATCGAAACA.GCCT.GCGCG.G..C.CGC.A.TCGGCT.TC.CGC.CTG..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCGTCGTTGGt                         >  1:4004196/1‑101 (MQ=255)


                                                                             gggggCGTGGATCGAAACA.GCCT.GCGCG.G..C.CGC.A.TCGGCT.TC.CGC.CTG..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCGTCGTTGGt                         <  2:2651635/101‑1 (MQ=255)


                                                                              ggggCGTGGATCGAAACA.GCCT.GCGCG.G..C.CGC.A.TCGGCT.TC.CGC.CTG..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCGTCGTTGGTc                        <  2:3998185/101‑1 (MQ=255)


                                                                                  gggggATCGAAACA.GCCT.GCGCG.G..C.CGC.A.TCGGCT.TC.CGC.CTG..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCGTCGTTGGTCAGcc                    <  2:1504348/98‑1 (MQ=255)


                                                                                  ggTGGATAGAAACA.GCCT.GCGCG.G..C.CGC.A.TCGGCT.TC.CGC.CTG..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCGTCGTTGGTCAGcc                    <  2:747199/100‑1 (MQ=255)


                                                                                   gTGGATCGAAACA.GCCT.GCGCG.G..C.CGC.A.TCGGCT.TC.CGC.CTG..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCGTCGTTGGTCAGCCg                   <  1:3623409/101‑1 (MQ=255)


                                                                                   gTGGATCGAAACA.GCCT.GCGCG.G..C.CGC.A.TCGGCT.TC.CGC.CTG..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCGTCGTTGGTCAGCCg                   >  1:1970120/1‑101 (MQ=255)


                                                                                   gTGGATCGAAACA.GCCT.GCGCG.G..C.CGC.A.TCGGCT.TC.CGC.CTG..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCCTCGGTGGGCAGCCg                   >  2:4335797/1‑101 (MQ=255)


                                                                                     ggATCGAAACA.GCCT.GCGCG.G..C.CGC.A.TCGGCT.TC.CGC.CTG..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCGTCGTTGGTCAGCCGGa                 >  2:1399203/1‑101 (MQ=255)


                                                                                       aTCGAAACA.GCCT.GCGCG.G..C.CGC.A.TCGGCT.TC.CGC.CTG..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCGTCGTTGGTCAGCCGGACg               <  1:2350078/101‑1 (MQ=255)


                                                                                          gAAACA.GCCT.GCGCG.G..C.CGC.A.TCGGCT.TC.CGC.CTG..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCGTCGTTGGTCAGCCGGACGATg            <  1:771636/101‑1 (MQ=255)


                                                                                             aCA.GCCT.GCGCG.G..C.CGC.A.TCGGCT.TC.CGC.CTG..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCGTCGTTGGTCAGCCGGACGATGTcc         >  2:1913806/1‑101 (MQ=255)


                                                                                             aCA.GCCT.GCGCG.G..C.CGC.A.TCGGCT.TC.CGC.CTG..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCGTCGTTGGTCAGCCGGACGATGTcc         >  1:377430/1‑101 (MQ=255)


                                                                                              cA.GCCT.GCGCG.G..C.CGC.A.TCGGCT.TC.CGC.CTG..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCGTCGTTGGTCAGCCGGACGATGTCCg        <  1:2595785/101‑1 (MQ=255)


                                                                                                 gCCT.GCGCG.G..C.CGC.A.TCGGCT.TC.CGC.CTG..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCGTCGTTGGTCAGCCGGACGATGTCCGTc      <  1:2753155/101‑1 (MQ=255)


                                                                                                   cT.GCGCG.G..C.CGC.A.TCGGCT.TC.CGC.CTG..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCGTCGTTGGTCAGCCGGACGATGTCCGTCGc    >  2:3896688/1‑101 (MQ=255)


CTCCCCCCGCGGGGGCGTGGATCGAAACCGGTCCAGAGATAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.GCCT.GCGCG.G..C.CGC.A.TCGGCT.TC.CGC.CTG..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCGTCGTTGGTCAGCCGGACGATGTCCGTCGCTC  >  NC_014034/1396840‑1397040

Base quality scores:


ATCG

< 3 ≤


ATCG

< 20 ≤


ATCG

< 27 ≤


ATCG

< 33 ≤


ATCG

< 40 ≤


ATCG