BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_014034	1,396,958	C→T	15.8%	F280F (TTC→CAT)	RCAP_rcc01307 →	hypothetical protein

Read alignment evidence...
	seq id	position		change	freq	score	reads	annotation	genes	product
*	NC_014034	1,396,958	0	C→T	15.8%	128.6 0.0 ‑0.4	398	F280F (TTC→TTT)	RCAP_rcc01307	hypothetical protein
Reads supporting (aligned to +/- strand): new base (24/23): ref base (120/117): total (197/201)
Fisher's exact test strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 3.73e-01

Only 100 of 441 total aligned reads displayed.


GGATCGAAACCGGTCCAGAGATAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.GCCT.GCGCG.G..C.CGC.A..TCGGCT.TCCGC.CT..G..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCGTCGTTGGTCAGCCGGACGATGTCCGTCGCTCCCCCCGCGGGGGCGTGGA  >  NC_014034/1396858‑1397058


ggATCGAAACCGGTCCAGAGATAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.GCCT.GCGCG.G..C.CGC.A..TCGGCT.Tc                                                                                                            >  2:1468206/1‑101 (MQ=255)


 gATCGAAACCGGTCCAGAGATAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.GCCT.GCGCG.G..C.CGC.A..TCGGCT.Tcc                                                                                                           <  1:1788990/101‑1 (MQ=255)


 gATCGAAACCGGTCCAGAGATAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.GCCT.GCGCG.G..C.CGC.A..TCGGCT.Tca                                                                                                           >  1:3671096/1‑100 (MQ=255)


    cGAAACCGGTCCAGAGATAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.GCCT.GCGCG.G..C.CGC.A..TCGGCT.TCCGc.c                                                                                                       <  1:3593500/101‑1 (MQ=255)


       aaCCGGTCCAGAGATAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.GCCT.GCGCG.G..C.CGC.A..TCGGCT.TCCGC.CT..G..c                                                                                                <  1:2135722/101‑1 (MQ=255)


          cGGTCCAGAGATAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.GCCT.GCGCG.G..C.CGC.A..TCGGCT.TCCGC.CT..G..CGTg                                                                                             <  2:3053645/101‑1 (MQ=255)


                 gagaTAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.GCCT.GCGCG.G..C.CGC.A..TCGGCT.TCCGC.CT..G..CGTG.GTCGCTc                                                                                     >  2:1116184/1‑101 (MQ=255)


                  agaTAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.GCCT.GCGCG.G..C.CGC.A..TCGGCT.TCCGC.CT..G..CGTG.GTCGCTcc                                                                                    <  1:2909133/101‑1 (MQ=255)


                     tAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.GCCT.GCGCG.G..C.CGC.A..TCGGCT.TCCCC.CT..G..CGTG.GTCGCTccccc                                                                                 >  1:3955416/1‑101 (MQ=255)


                       gACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.GCCT.GCGCG.G..C.CGC.A..TCGGCT.TCCGC.CT..G..CGTG.GGCGCTCCCCCcg                                                                               >  2:4440185/1‑101 (MQ=255)


                        cccGCGCGGACCTCCTCAGGCGTCGCTCCCCCCGCGGGGGCGTGGAGCGAAACA.GCCT.GCGCG.G..C.CGC.A..TCGGCT.TCCGC.CT..G..CGTG.GTCGCGCCCGCcgc                                                                              <  2:1878481/100‑1 (MQ=38)


                            cgcgGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.GCCT.GCGCG.G..C.CGC.A..TCGGCT.TCCGC.CT..G..CGTG.GTCGCTCCCCCCGCgggg                                                                          <  1:1988471/101‑1 (MQ=255)


                              cgGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.GCCT.GCGCG.G..C.CGC.A..TCGGCT.TCCGC.CT..C..CGTG.GTCGCTCCCCCCGCGGGGGc                                                                        >  1:4994181/1‑101 (MQ=255)


                               ggACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.GCCT.GCGCG.G..C.CGC.A..TCGGCT.TCCGC.CT..G..CGTG.GTCGCTCCCCCCGCGGGGGCg                                                                       >  2:2226839/1‑101 (MQ=255)


                                gccctcctCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.GCCT.GCGCG.G..C.CGC.A..TCGGCT.TCCGC.CT..G..CGTG.GTCGTTCCCCCCGCGGGGGCGt                                                                      <  1:1854325/99‑1 (MQ=255)


                                gACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.GCCT.GCGCG.G..C.CGC.A..TCGGCT.TCCGC.CT..G..CGTG.GTCGCTCCCCCCGCGGGGGCGt                                                                      <  2:1809747/101‑1 (MQ=255)


                                 aCCTCCCCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.GCCT.GCGCG.G..C.CGC.A..TCGGCT.TCCGC.CT..G..CGTG.GTCGCTCCCCCCGCGGGGGCGTg                                                                     <  2:3189345/101‑1 (MQ=255)


                                   tcgcggttgcGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATGGCTATGGCG.G..C.AGT.G..TCAGGT.T.TTC.CA..G..CGGC.GTCGCTCCCCCCGCGGGGGCGTgg                                                                    <  2:409452/92‑1 (MQ=0)


                                   ctcctcAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.GCCT.GCGCG.G..C.CGC.A..TCGGCT.TCCGC.CT..G..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGa                                                                   <  1:2808515/101‑1 (MQ=255)


                                   attggccccggTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA..ACT.GACC.....C.GGC.A..ACGGCC.TATGCGCT..GGACGTG.GTCGCTCCCCCCGCGGGGGCGTGGa                                                                   <  2:1157589/91‑1 (MQ=0)


                                    tcctcAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.GCCT.GCGCG.G..C.CGC.A..TCGGCT.TCCGC.CT..G..CGTG.GTCGCTCCCCCCCCGGGGGCCTgggt                                                                  >  1:4765541/1‑99 (MQ=255)


                                     tggccccggTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA..ACT.GACC.....C.GGC.A..ACGGCC.TATGCGCT..GGACGTG.GTCGCTCCCCCCGCGGGGGCGTGGATc                                                                 >  1:1501469/9‑101 (MQ=2)


                                     cctcAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.GCCT.GCGCG.G..C.CGC.A..TCGGCT.TCCGC.CT..G..CGTG.GTCGCCCCCCCCGCGGGGGCGTGGATc                                                                 <  1:2874552/101‑1 (MQ=255)


                                      cccgcccGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GCGT.GCGCG.C..CATGA.AT.TCATCG.AGCGC.CA..T..CGAGCGTCGCTCCCCCCGCGGGGGCGTGGa                                                                   >  2:3873688/7‑101 (MQ=2)


                                      caacactgTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC..GCTG.GCGCGCG..C.CGC.G..CCGGATCTTTGT.CT..G..CGCG.GTCGCTCCCCCCGCGGGGGCGTGGATc                                                                 <  2:2347530/94‑1 (MQ=9)


                                      caacactgTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC..GCTG.GCGCGCG..C.CGC.G..CCGGATCTTTGT.CT..G..CGCG.GTCGCTCCCCCCGCGGGGGCGTGGATc                                                                 <  2:951001/94‑1 (MQ=9)


                                       ggttgcGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATGGCTATGGCG.G..C.AGT.G..TCAGGT.T.TTC.CA..G..CGGC.GTCGCTCCCCCCGCGGGGGCGTGGATCg                                                                <  2:2755801/96‑1 (MQ=2)


                                       gccccggTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA..ACT.GACC.....C.GGC.A..ACGGCC.TATGCGCT..GGACGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGa                                                               >  2:3991955/7‑101 (MQ=2)


                                        acactgTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC..GCTG.GCGCGCG..C.CGC.G..CCGGATCTTTGT.CT..G..CGCG.GTCGCTCCCCCCGCGGGGGCGTGGATCGa                                                               >  1:1521890/6‑101 (MQ=9)


                                        acactgTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC..GCTG.GCGCGCG..C.CGC.G..CCGGATCTTTGT.CT..G..CGCG.GTCGCTCCCCCCGCGGGGGCGTGGATCGa                                                               >  1:4947849/6‑101 (MQ=9)


                                         gcccGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GCGT.GCGCG.C..CATGA.AT.TCATCG.AGCGC.CA..T..CGAGCGTCGCTCCCCCCGCGGGGGCGTGGATCg                                                                >  2:4175570/4‑101 (MQ=2)


                                         cccggTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA..ACT.GACC.....C.GGC.A..ACGGCC.TATGCGCT..GGACGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGaaa                                                             <  1:903933/97‑1 (MQ=2)


                                         aGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.GCCT.GCGCG.G..C.CGC.A..TCGGCT.TCCGC.CT..G..CGTG.GTCGCTCCCCCCGCGGGGGGGGGGGTCGaaa                                                             >  1:20549/1‑101 (MQ=255)


                                         aGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.GCCT.GCGCG.G..C.CGC.A..TCGGCT.TCCGC.CT..G..CGTG.GTCGCTCCCCCCGCGGGGGCGGGGATCGaaa                                                             >  1:429884/1‑101 (MQ=255)


                                          gACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.GCCT.GCGCG.G..C.CGC.A..TCGGCT.TCCGC.CT..G..CGTG.GTTGCTCCCCCCGCGGGGGCGGGGATCGAAAc                                                            >  1:747289/1‑101 (MQ=255)


                                            cGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GCGT.GCGCG.C..CATGA.AT.TCATCG.AGCGC.CA..T..CGAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGaaa                                                             >  2:477790/1‑101 (MQ=2)


                                            cGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GCGT.GCGCG.C..CATGA.AT.TCATCG.AGCGC.CA..T..CGAGCGGCGCTCCCCCCGCGGGGCCGTGGATCGaaa                                                             >  2:1677022/1‑101 (MQ=2)


                                             gTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GCGT.GCGCG.C..CATGA.AT.TCATCG.AGCGC.CA..T..CGAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAc                                                            >  1:419238/1‑101 (MQ=2)


                                             gTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATGGCTATGGCG.G..C.AGT.G..TCAGGT.T.TTC.CA..G..CGGC.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAAccc                                                          <  2:1090364/101‑3 (MQ=2)


                                             gTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA..ACT.GACC.....C.GGC.A..ACGGCC.TATGCGCT..GGACGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAActac                                                         >  1:3824646/1‑98 (MQ=2)


                                             gTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC..GCTG.GCGCGCG..C.CGC.G..CCGGATCTTTGT.CT..G..CGCG.GTCGCTCCCCCCGCGGGGGCGTGGGTCGAAActc                                                          >  1:1057255/1‑99 (MQ=9)


                                             gTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC..GCTG.GCGCGCG..C.CGC.G..CCGGATCTTTGT.CT..G..CGCG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAActc                                                          <  1:989258/101‑3 (MQ=9)


                                             gTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC..GCTG.GCGCGCG..C.CGC.G..CCGGATCTTTGT.CT..G..CGCG.GTCGCTCCCCCCGCGGGGGCGCGGATCGAAActc                                                          >  1:1664245/1‑99 (MQ=9)


                                              tCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GCGT.GCGCG.C..CATGA.AT.TCATCG.AGCGC.CA..T..CGAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACa                                                           <  2:1261210/101‑1 (MQ=2)


                                              tCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GCGT.GCGCG.C..CATGA.AT.TCATCG.AGCGC.CA..T..CGAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACa                                                           <  2:3735872/101‑1 (MQ=2)


                                              tCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.GCCT.GCGCG.G..C.CGC.A..TCGGCT.TCCGC.CT..G..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCa                                                        >  1:4860951/1‑101 (MQ=255)


                                              tCGCTCCCCCCGCGGGGGCGTGGATCGAAACA..ACT.GACC.....C.GGC.A..ACGGCC.TATGCGCT..GGACGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAActaca                                                        <  1:1936375/101‑5 (MQ=2)


                                               cGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GCGT.GCGCG.C..CATGA.AT.TCATCG.AGCGC.CA..T..CGAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACac                                                          <  2:4893606/101‑2 (MQ=2)


                                               cGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GCGT.GCGCG.C..CATGA.AT.TCATCG.AGCGC.CA..T..CGAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACac                                                          >  1:1221739/1‑100 (MQ=2)


                                               cGCTCCCCCCGCGGGGGCGTGGATCGAAACA.GCCT.GCGCG.G..C.CGC.A..TCGGCT.TCCGC.CT..G..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAg                                                       >  2:1351571/1‑101 (MQ=255)


                                               cGCCCCCCCCGCGGGGGCGTGGATCGAAACT.TGAT.GCCCA.GATC.CGCAA..TCGGC...CGGG.CT..C..GATC.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAAcctat                                                        <  2:2876833/101‑5 (MQ=0)


                                                gCTCCCCCCGCGGGGGCGTGGATCGAAACATGGCTATGGCG.G..C.AGT.G..TCAGGT.T.TTC.CA..G..CGGC.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAAcccgcc                                                       <  1:3386612/101‑6 (MQ=2)


                                                gCTCCCCCCGCGGGGGCGTGGATCGAAAC..GCTG.GCGCGCG..C.CGC.G..CCGGATCTTTGT.CT..G..CGCG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAActcggc                                                       <  2:359292/101‑6 (MQ=9)


                                                 cTCCCCCCGCGGGGGCGTGGATCGAAACT.GCGT.GCGCG.C..CATGA.AT.TCATCG.AGCGC.CA..T..CGAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCa                                                        <  2:2053069/101‑1 (MQ=2)


                                                 cTCCCCCCGCGGGGGCGTGGATCGAAACT.GCGT.GCGCG.C..CATGA.AT.TCATCG.AGCGC.CA..T..CGAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCa                                                        <  1:3411648/101‑1 (MQ=2)


                                                  tCCCCCCGCGGGGGCGTGGATCGAAACT.GCGT.GCGCG.C..CATGA.AT.TCATCG.AGCGC.CA..T..CGAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCaa                                                       <  1:2944103/101‑2 (MQ=2)


                                                  tCCCCCCGCGGGGGCGTGGATCGAAACA..ACT.GACC.....C.GGC.A..ACGGCC.TATGCGCT..GGACGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAActacaccgg                                                    >  1:322135/1‑93 (MQ=2)


                                                  tCCCCCCGCGGGGGCGTGGATCGAAAC..GCTG.GCGCGCG..C.CGC.G..CCGGATCTTTGT.CT..G..CGCG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAActcggcct                                                     >  2:4686230/1‑94 (MQ=9)


                                                  cccccccGCGGGGGCGTGGATCGAAAC..GCTG.GCGCGCG..C.CGC.G..CCGGATCTTTGT.CT..G..CGCG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAActcggcct                                                     <  1:4517929/100‑8 (MQ=9)


                                                   ccccccGCGGGGGCGTGGATCGAAACT.GCGT.GCGCG.C..CATGA.AT.TCATCG.AGCGC.CA..T..CGAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCaat                                                      <  1:313218/101‑3 (MQ=2)


                                                   ccccccGCGGGGGCGTGGATCGAAACATGGCTATGGCG.G..C.AGT.G..TCAGGT.T.TTC.CA..G..CGGC.GTCGCTCCCCCCGCGGGGGCGTGGATCGaaaaccgccccg                                                    >  2:1446/1‑92 (MQ=2)


                                                   ccccccGCGGGGGCGTGGATCGAAACA..ACT.GACC.....C.GGC.A..ACGGCC.TATGCGCTGGG..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAActacaccggg                                                   >  1:4245610/1‑92 (MQ=2)


                                                   ccccccGCGGGGGCGTGGATCGAAAC..GCTG.GCGCGCG..C.CGC.G..CCGGATCTTTGT.CT..G..CGCG.GTCGCTCCCCCCGCGGGGGCGTGGCTCGAAActcggcctc                                                    >  2:664684/1‑93 (MQ=9)


                                                   ccccccGCGGGGGCGTGGATCGAAAC..GCTG.GCGCGCG..C.CGC.G..CCGGATCTTTGT.CT..G..CGCG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAActcggcctc                                                    >  2:4949051/1‑93 (MQ=9)


                                                    cccccGCGGGGGCGTGGATCGAAACA.GCCT.GCGCG.G..C.CGC.A..TCGGCT.TCCGC.CT..G..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCtcgc                                                  >  2:2934152/1‑100 (MQ=255)


                                                    cccccGCGGGGGCGTGGATCGAAAC..GCTG.GCGCGCG..C.CGC.G..CCGGATCTTTGT.CT..G..CGCG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAActcggcctcg                                                   <  2:1579696/101‑10 (MQ=9)


                                                    cccccGCGGGGGCGTGGATCGAAAC..GCTG.GCGCGCG..C.CGC.G..CCGGATCTTTGT.CT..G..CGCG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAActcggcctcg                                                   <  1:1301550/101‑10 (MQ=9)


                                                     ccccGCGGGGGCGTGGATCGAAACT.GCGT.GCGCG.C..CATGA.AT.TCATCG.AGCGC.CA..T..CGAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGaaaaaccaatgc                                                    >  2:2444389/1‑92 (MQ=2)


                                                     ccccGCGGGGGCGTGGATCGAAACT.GCGT.GCGCG.C..C.ATG.AGTTCATCG.AGCGC.CA..T..CGAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCaatgc                                                    <  2:4299223/101‑5 (MQ=0)


                                                     ccccGCGGGGGCGTGGATCGAAACA.GCCT.GCGCG.G..C.CGC.A..TCGGCT.TCCGC.CT..G..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCtcgtc                                                 >  2:3471824/1‑101 (MQ=255)


                                                      cccGCGGGGGCGTGGATCGAAACA.GCCT.GCGCG.G..C.CGC.A..TCGGCT.TCCGC.CT..G..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCtcgtcg                                                <  1:634202/101‑1 (MQ=255)


                                                       ccGGGGGGGCGTGGATCGAAACA.GCCT.GCGCG.G..C.CGC.A..TCGGCT.TCCGC.CT..G..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTcgtcgt                                               <  1:682592/101‑1 (MQ=255)


                                                        cgcgGGGGCGTGGATCGAAACT.GCGT.GCGCG.C..CATGA.AT.TCATCG.AGCGC.CA..T..CGAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCaatgccga                                                 <  2:2810741/101‑8 (MQ=0)


                                                         gggggggCGTGGATCGAAACA.GCCT.GCGCG.G..C.CCC.A..TCGGCT.TCCGC.CT..G..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCGTCGTTg                                             <  1:2195171/99‑1 (MQ=255)


                                                         gcgGGGGCGTGGATCGAAACA.GCCT.GCGCG.G..C.CGC.A..TCGGCT.TCCGC.CT..G..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCGTCGTTg                                             >  1:3748730/1‑101 (MQ=255)


                                                          cgGGGGCGTGGATCGAAACA.GCCT.GCGCG.G..C.CGC.A..TCGGCT.TCCGC.CT..G..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCGTCGTTgg                                            <  1:1394581/101‑1 (MQ=255)


                                                          cgGGGGCGTGGATCGAAACA.GCCT.GCGCG.G..C.CGC.A..TCGGCT.TCCGC.CT..G..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCGTCGTTgg                                            <  1:2689497/101‑1 (MQ=255)


                                                           gggggCGTGGATCGAAACA.GCCT.GCGCG.G..C.CGC.A..TCGGCT.TCCGC.CT..G..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCGTCGTTGGt                                           >  1:4378169/1‑101 (MQ=255)


                                                           gggggCGTGGATCGAAACA.GCCT.GCGCG.G..C.CGC.A..TCGGCT.TCCGC.CT..G..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCGTCGTTGGt                                           <  2:2651635/101‑1 (MQ=255)


                                                               gCGTGGATCGAAACA.GCCT.GCGCG.G..C.CGC.A..TCGGCT.TCCGC.CT..G..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCGTCGTTGGTCAGc                                       <  2:3336316/101‑1 (MQ=255)


                                                                ggTGGATAGAAACA.GCCT.GCGCG.G..C.CGC.A..TCGGCT.TCCGC.CT..G..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCGTCGTTGGTCAGcc                                      <  2:747199/100‑1 (MQ=255)


                                                                cGTGGATCGAAACA.GCCT.GCGCG.G..C.CGC.A..TCGGCT.TCCGC.CT..G..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCGTCGTTGGTCAGcc                                      <  1:3496113/101‑1 (MQ=255)


                                                                 gTGGATCGAAACA.GCCT.GCGCG.G..C.CGC.A..TCGGCT.TCCGC.CT..G..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCCTCGGTGGGCAGCCg                                     >  2:4335797/1‑101 (MQ=255)


                                                                   ggATCGAAACA.GCCT.GCGCG.G..C.CGC.A..TCGGCT.TCCGC.CT..G..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCGTCGTTGGTCAGCCGGa                                   >  1:3777720/1‑101 (MQ=255)


                                                                   ggATCGAAACA.GCCT.GCGCG.G..C.CGC.A..TCGGCT.TCCGC.CT..G..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCGTCGTTGGTCAGCCGGa                                   >  1:4006472/1‑101 (MQ=255)


                                                                     aTCGAAACA.GCCT.GCGCG.G..C.CGC.A..TCGGCT.TCCGC.CT..G..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCGTCGTTGGTCAGCCGGACg                                 <  1:2350078/101‑1 (MQ=255)


                                                                           aCA.GCCT.GCGCG.G..C.CGC.A..TCGGCT.TCCGC.CT..G..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCGTCGTTGGTCAGCCGGACGATGTcc                           <  1:1439366/101‑1 (MQ=255)


                                                                           aCA.GCCT.GCGCG.G..C.CGC.A..TCGGCT.TCCGC.CT..G..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCGTCGTTGGTCAGCCGGACGATGTcc                           <  2:196544/101‑1 (MQ=255)


                                                                            cA.GCCT.GCGCG.G..C.CGC.A..TCGGCT.TCCGC.CT..G..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCGTCGTTGGTCAGCCGGACGATGTCCg                          <  1:2595785/101‑1 (MQ=255)


                                                                                ccT.GCGCG.G..C.CGC.A..TCGGCT.TCCGC.CT..G..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCGTCGTTGGTCAGCCGGACGATGTCCGTCg                       >  1:2236265/1‑101 (MQ=255)


                                                                                 cT.GCGCG.G..C.CGC.A..TCGGCT.TCCGC.CT..G..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCGTCGTTGGTCAGCCGGACGATGTCCGTCGc                      >  1:4091246/1‑101 (MQ=255)


                                                                                          g..C.CGC.A..TCGGCT.TCCGC.CT..G..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCGTCGTTGGTCAGCCGGACGATGTCCGTCGCTcccccc               <  1:2427407/101‑1 (MQ=255)


                                                                                             c.cGC.A..TCGGCT.TCCGC.CT..G..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCGTCGTTGGTCAGCCGGACGATGTCCGTCGCTCCCCCcg              <  2:309148/101‑1 (MQ=255)


                                                                                             c.cGC.A..CCGGCT.TCCGC.CT..G..CGGG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCGTCGTTGGTCAGCCGGACGATGTCCGTCTCTCCCCCcg              <  2:3265388/101‑1 (MQ=255)


                                                                                               cGC.A..TCGGCT.TCCGC.CT..G..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCGTCGTTGGTCAGCCGGACGATGTCCGTCGCTCCCCCcgc             <  1:4440504/101‑1 (MQ=255)


                                                                                                gC.A..TCGGCT.TCCGC.CT..G..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCGTCGTTGGTCAGCCGGACGATGTCCGTCGCTCCCCCcgcg            >  2:1396510/1‑101 (MQ=255)


                                                                                                 c.A..TCGGCT.TCCGC.CT..G..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCGTCGTTGGTCAGCCGGACGATGTCCGTCGCTCCCCCCGCgg           >  1:2300340/1‑101 (MQ=255)


                                                                                                   a..TCGGCT.TCCGC.CT..G..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCGTCGTTGGTCAGCCGGACGATGTCCGTCGCTCCCCCCGCggg          >  2:56684/1‑101 (MQ=255)


                                                                                                       cGGCT.TCCGC.CT..G..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCGTCGTTGGTCAGCCGGACGATGTCCGTCGCTCCCCCCGCggggg        >  1:4604600/1‑101 (MQ=255)


                                                                                                        ggCT.TCCGC.CT..G..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCGTCGTTGGTCAGCCGGACGATGTCCGTCGCTCCCCCCGCGGGGGc       >  2:4591499/1‑101 (MQ=255)


GGATCGAAACCGGTCCAGAGATAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.GCCT.GCGCG.G..C.CGC.A..TCGGCT.TCCGC.CT..G..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCGTCGTTGGTCAGCCGGACGATGTCCGTCGCTCCCCCCGCGGGGGCGTGGA  >  NC_014034/1396858‑1397058

Base quality scores:


ATCG

< 3 ≤


ATCG

< 17 ≤


ATCG

< 24 ≤


ATCG

< 33 ≤


ATCG

< 39 ≤


ATCG