BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_014034	1,396,959	C→T	30.7%	R281C (CGC→TTT)	RCAP_rcc01307 →	hypothetical protein

Read alignment evidence...
	seq id	position		change	freq	score	reads	annotation	genes	product
*	NC_014034	1,396,959	0	C→T	30.7%	0.0 ‑0.7 ‑0.3	399	R281C (CGC→TGC)	RCAP_rcc01307	hypothetical protein
Reads supporting (aligned to +/- strand): new base (64/58): ref base (133/142): total (197/202)
Fisher's exact test strand distribution p-value = 5.14e-01
Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 4.57e-01

Only 100 of 436 total aligned reads displayed.


GATCGAAACCGGTCCAGAGATAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.A..GCCT.GCGCG.GC.CGCA.TCGGCT.TC.CGC.CTG..CG.TG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCGTCGTTGGTCAGCCGGACGATGTCCGTCGCTCCCCCCGCGGGGGCGTGGAT  >  NC_014034/1396859‑1397059


gATCGAAACCGGTCCAGAGATAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.A..GCCT.GCGCG.GC.CGCA.TCGGCT.Tc.c                                                                                                           <  1:1788990/101‑1 (MQ=255)


    gAAACCGGTCCAGAGATAGACCGCGCGGACCTCCTCAGACGGCGCTCCTCCCGCGGGGACGTGGATCGAAAC.A..GCCT.GCGCG.GC.CGCA.TCGGCT.TC.CGC.Ct                                                                                                      >  2:1654952/1‑101 (MQ=255)


      aaCCGGTCCAGAGATAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.A..GCCT.GCGCG.GC.CGCA.TCGGCT.TC.CGC.CTG..c                                                                                                  <  1:2135722/101‑1 (MQ=255)


             ccAGAGATAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.A..GCCT.GCGCG.GC.CGCA.TCGGCT.TG.CGC.CCG..CG.TG.GTCg                                                                                         >  2:2844613/1‑101 (MQ=255)


                gagaTAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.A..GCCT.GCGCG.GC.CGCA.TCGGCT.TC.CGC.CTG..CG.TG.GTCGCTc                                                                                      >  2:1116184/1‑101 (MQ=255)


                 agaTAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.A..GCCT.GCGCG.GC.CGCA.TCGGCT.TC.CGC.CTG..CG.TG.GTCGCTcc                                                                                     <  1:2909133/101‑1 (MQ=255)


                    tAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.A..GCCT.GCGCG.GC.CGCA.TCGGCT.TC.CCC.CTG..CG.TG.GTCGCTccccc                                                                                  >  1:3955416/1‑101 (MQ=255)


                     aGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.A..GCCT.GCGCG.GC.CGCA.TCGGCT.TC.CGC.CTG..CG.TG.GTCGCTcccccc                                                                                 <  2:228429/101‑1 (MQ=255)


                     aGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.A..GCCT.GCGCG.GC.CGCA.TCGGCT.TC.CGC.CTG..CG.TG.GTCGCTcccccc                                                                                 >  2:3407247/1‑101 (MQ=255)


                       aCCGCGCGGCCCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.A..GCCT.GCGCG.GC.CGCA.TCGGCT.TC.CGC.CTG..CG.TG.GTCGCTCCCCCcgc                                                                               <  2:3948293/101‑1 (MQ=255)


                        ccGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.A..GCCT.GCGCG.GC.CGCA.TCGGCT.TC.CGC.CTG..CG.TG.GTCGCTCCCCCcgcg                                                                              >  2:4995430/1‑101 (MQ=255)


                           cgcgGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.A..GCCT.GCGCG.GC.CGCA.TCGGCT.TC.CGC.CTG..CG.TG.GTCGCTCCCCCCGCgggg                                                                           <  1:1988471/101‑1 (MQ=255)


                              ggACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.A..GCCT.GCGCG.GC.CGCA.TCGGCT.TC.CGC.CTG..CG.TG.GTCGCTCCCCCCGCGGGGGCg                                                                        >  2:1847137/1‑101 (MQ=255)


                                  tcgcggttgcGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.AT.GGCTATGGCG.GC.AGTG.TCAGGT.T..TTC.CAG..CG.GC.GTCGCTCCCCCCGCGGGGGCGTgg                                                                     <  2:4033074/92‑1 (MQ=0)


                                  ggtcaacactgTCGCCCCCCCCGCGGGGGCGTGGATCGAAAC....GCTG.GCGCGCGC.CGCG.CCGGATCTT.TGT.CTG..CG.CG.GTCGCTCCCCCCGCGGGGGCGTgg                                                                     <  2:3587270/91‑1 (MQ=9)


                                  ctcctcAGACGTCTCGCCCCCCGCGGGGGCGTGGATCGAAAC.A..GCCT.GCGCG.GC.CGCA.TCGGCT.TC.CGC.CTG..CG.TG.GTCGCTCCCCCCGCGGGGGCGTGGa                                                                    <  2:2635324/101‑1 (MQ=255)


                                  ctcctcAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.A..GCCT.GCGCG.GC.CGCA.TCGGCT.TC.CGC.CTG..CG.TG.GTCGCTCCCCCCGCGGGGGCGTGGa                                                                    <  1:2808515/101‑1 (MQ=255)


                                   tcctcAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.A..GCCT.GCGCG.GC.CGCA.TCGGCT.TC.CGC.CTG..CG.TG.GTCGCTCCCCCCGCGGGGGCGGGGAt                                                                   >  1:1894328/1‑101 (MQ=255)


                                   tcctcAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.A..GCCT.GCGCG.GC.CGCA.TCGGCT.TC.CGC.CTG..CG.TG.GTCGCTCCCCCCCCGGGGGCCTgggt                                                                   >  1:4765541/1‑99 (MQ=255)


                                   gtcaacactgTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC....GCTG.GCGCGCGC.CGCG.CCGGATCTT.TGT.CTG..CG.CG.GTCGCTCCCCCCGCGGGGGCGTGGa                                                                    >  2:4264088/10‑101 (MQ=9)


                                    tggccccggTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.A...ACT.GACC...C.GGCA.ACGGCC.TA.TGCGCTGGACG.TG.GTCGCTCCCCCCGCGGGGGCGTGGATc                                                                  >  1:1501469/9‑101 (MQ=2)


                                    cctcgcaCGTCGGCCCCCCCGCCGGGGCGTGGATGGAAGCAA..TGCG.GCGCG.GG.CCCA.T.GGCT.GC.CGG.ACC..CGCCC.GTCGCTCCCCCCGCGGGGGCGTGGAt                                                                   <  2:4801567/95‑1 (MQ=0)


                                     ggccccggTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.A...ACT.GACC...C.GGCA.ACGGCC.TA.TGCGCTGGACG.TG.GTCGCTCCCCCCGCGGGGGCGTGGATCg                                                                 <  2:3027319/94‑1 (MQ=2)


                                     cggttgcGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.AT.GGCTATGGCG.GC.AGTG.TCAGGT.T..TTC.CAG..CG.GC.GTCGCTCCCCCCGCGGGGGCGTGGATc                                                                  <  2:4132904/95‑1 (MQ=2)


                                     caacactgTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC....GCTG.GCGCGCGC.CGCG.CCGGATCTT.TGT.CTG..CG.CG.GTCGCTCCCCCCGCGGGGGCGTGGATc                                                                  <  2:951001/94‑1 (MQ=9)


                                      ggttgcGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.AT.GGCTATGGCG.GC.AGTG.TCAGGT.T..TTC.CAG..CG.GC.GTCGCTCCCCCCGCGGGGGCGGGGACCg                                                                 >  2:2397628/6‑101 (MQ=0)


                                       cAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.A..GCCT.GCGCG.GC.CGCA.TCGGCT.TC.CGC.CTG..CG.TG.GTCGCTCCCCCCGCGGGGGCGTGGATCGaa                                                               >  1:2062391/1‑101 (MQ=255)


                                       acactgTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC....GCTG.GCGCGCGC.CGCG.CCGGATCTT.TGT.CTG..CG.CG.GTCGCTCCCCCCGCGGGGGCGTGGATCGa                                                                >  1:4947849/6‑101 (MQ=9)


                                        cccggTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.A...ACT.GACC...C.GGCA.ACGGCC.TA.TGCGCTGGACG.TG.GTCGCTCCCCCCGCGGGGGCGTGGATCGaaa                                                              <  1:903933/97‑1 (MQ=2)


                                        aGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.A..GCCT.GCGCG.GC.CGCA.TCGGCT.TC.CGC.CTG..CG.TG.GTCGCTCCCCCCGCGGGGGCGGGGATCGaaa                                                              >  1:429884/1‑101 (MQ=255)


                                         tgcGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.AT.GGCTATGGCG.GC.AGTG.TCAGGT.T..TTC.CAG..CG.GC.GGCGCTCCCCCCGCGGGGGCGTGGATCGaaa                                                              >  2:290430/3‑101 (MQ=2)


                                          gcGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.AT.GGCTATGGCG.GC.AGTG.TCAGGT.T..TTC.CAG..CG.GC.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAAc                                                             <  1:716399/100‑1 (MQ=2)


                                          ctgTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC....GCTG.GCGCGCGC.CGCG.CCGGATCTT.TGT.CTG..CG.CG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAAc                                                             >  2:312723/3‑101 (MQ=9)


                                           cGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.T..GCGT.GCGCG.CCATGAATTCATCG.AG.CGC.CAT..CG.AGCGTCGCTCCCCCCGCGGGGGCGTGGATCGaaa                                                              <  1:2838087/101‑1 (MQ=2)


                                            gTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.T..GCGT.GCGCG.CCATGAATTCATCG.AG.CGC.CAT..CG.AGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAc                                                             >  1:419238/1‑101 (MQ=2)


                                            gTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.AT.GGCTATGGCG.GC.AGTG.TCAGGT.T..TTC.CAG..CG.GC.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAAccc                                                           <  2:1090364/101‑3 (MQ=2)


                                            gTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.A..GCCT.GCGCG.GC.CGCA.TCGGCT.TC.CGC.CTG..CG.TG.GTCGCTCCCCCCGCGGGGGCGTGGGTCGAAACATc                                                          >  2:1004889/1‑101 (MQ=255)


                                            gTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC....GCTG.GCGCGCGC.CGCG.CCGGATCTT.TGT.CTG..CG.CG.GTCGCTCCCCCCGCGGGGGCGTGGGTCGAAActc                                                           >  1:1057255/1‑99 (MQ=9)


                                            gTCGCCCCCCCCGCGGGGGCGTGGATCGAAAC.A..CCCT.GCGCC.GC.AGCG.AGTGCG.TCTGGA.ACA..GG.AT.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAActa                                                           <  2:4434227/101‑3 (MQ=2)


                                             tCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.T..GCGT.GCGCG.CCATGAATTCATCG.AG.CGC.CAT..CG.AGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACa                                                            <  2:1261210/101‑1 (MQ=2)


                                             tCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.A..GCCT.GCGCG.GC.CGCA.TCGGCT.TC.CGC.CTG..CG.TG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCa                                                         <  1:1600159/101‑1 (MQ=255)


                                             tCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.A...ACT.GACC...C.GGCA.ACGGCC.TA.TGCGCTGGACG.TG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAActaca                                                         <  1:1936375/101‑5 (MQ=2)


                                             gcGCCCCCCCCGCGGGGGCGTGGATCGAAAC.A..GCCT.GCGCG.GC.CGCA.TCGGCT.TC.CGC.CTG..CG.TG.GTCGCTCCCCCCGCGGGGGCGTTGATCGAAACATCa                                                         <  2:2129897/100‑1 (MQ=255)


                                              cGCTCCCCCCGCGGGGGCGTGGATCGAAAC.T..GCGT.GCGCG.CCATGAATTCATCG.AG.CGC.CAT..CG.AGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACac                                                           >  1:1221739/1‑100 (MQ=2)


                                              cGCTCCCCCCGCGGGGGCGTGGATCGAAAC.T..GCGT.GCGCG.CCATGAATTCATCG.AG.CGC.CAT..CG.AGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACac                                                           <  2:1704308/101‑2 (MQ=2)


                                              cGCTCCCCCCGCGGGGGCGTGGATCGAAAC.A..GCCT.GCGCG.GC.CGCA.TCGGCT.TC.CGC.CTG..CG.TG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAg                                                        >  2:1351571/1‑101 (MQ=255)


                                              cGCTCCCCCCGCGGGGGCGTGGATCGAAAC....GCTG.GCGCGCGC.CGCG.CCGGATCTT.TGT.CTG..CG.CG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAActcgg                                                         >  1:3678483/1‑97 (MQ=9)


                                               gCTCCCCCCGCGGGGGCGTGGATCGAAAC....GCTG.GCGCGCGC.CGCG.TCGGATCTT.TGT.CTG..CG.CG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAActcggc                                                        <  1:4247461/101‑6 (MQ=9)


                                               ccTCCCCCCGCGGGGGCGTGGATCGAAAC.T..GCGT.GCGCG.CCATGAATTCATCG.AG.CGC.CAT..CG.AGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACacc                                                          <  2:3235949/100‑3 (MQ=2)


                                               ccTCCCCCCGCGGGGGCGGGGATCGAAAC.A..GCCT.GCGCG.GC.CGCA.TCGGCT.TC.CGC.CTG..CG.TG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCacc                                                       <  2:4909765/100‑3 (MQ=255)


                                                ccccccccGCGGGGGCGTGGGTCCAAAC.ATTGCTT.TGGCG.GC.AGTG.TCAGGT.T..TTC.CAG..CG.GC.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAAcccgcca                                                       <  2:2766090/99‑7 (MQ=2)


                                                cacccccgGCGGGGGCGTGGATCGAAAC.A..GCCT.GCGCG.GC.CGCA.TCGGCT.TC.CGC.CTG..CG.TG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCt                                                      <  1:4995760/99‑1 (MQ=255)


                                                cTCCCCCCGCGGGGGCGTGGATCGAAAC.T..GCGT.GCGCG.CCATGAATTCATCG.AG.CGC.CAT..CG.AGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCa                                                         <  1:3411648/101‑1 (MQ=2)


                                                 tCCCCCCGCGGGGGCGTGGATCGAAAC.T..GCGT.GCGCG.CCATGAATTCATCG.AG.CGC.CAT..CG.AGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCaa                                                        <  1:2944103/101‑2 (MQ=2)


                                                 tCCCCCCGCGGGGGCGTGGATCGAAAC.A...ACT.GACC...C.GGCA.ACGGCC.TA.TGCGCTGGACG.TG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAActacaccgg                                                     >  1:322135/1‑93 (MQ=2)


                                                 tCCCCCCGCGGGGGCGTGGATCGAAAC....GCTG.GCGCGCGC.CGCG.CCGGATCTT.TGT.CTG..CG.CG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAActcggcct                                                      <  2:4739187/101‑8 (MQ=9)


                                                 cccccccGCGGGGGCGTGGATCGAAAC....GCTG.GCGCGCGC.CGCG.CCGGATCTT.TGT.CTG..CG.CG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAActcggcct                                                      <  1:4517929/100‑8 (MQ=9)


                                                  ccccccGCGGGGGCGTGGATCGAAAC.T..GCGT.GCGCG.CCATGAATTCATCG.AG.CGC.CAT..CG.AGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCaat                                                       <  1:313218/101‑3 (MQ=2)


                                                  ccccccGCGGGGGCGTGGATCGAAAC.AT.GGCTATGGCG.GC.AGTG.TCAGGT.T..TTC.CAG..CG.GC.GTCGCTCCCCCCGCGGGGGCGTGGATCGaaaaccgccccg                                                     >  2:1446/1‑92 (MQ=2)


                                                  ccccccGCGGGGGCGTGGATCGAAAC.AT.GGCTATGGCG.GC.AGTG.TCAGGT.T..TTC.CAG..CG.GC.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAAcccgccacg                                                     >  1:3586121/1‑93 (MQ=0)


                                                  ccccccGCGGGGGCGTGGATCGAAAC.A...ACT.GACC...C.GGCA.ACGGCC.TA.TGCGCTGGACG.TG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAActacaccggg                                                    >  2:3062559/1‑92 (MQ=2)


                                                  ccccccGCGGGGGCGTGGATCGAAAC....GCTG.GCGCGCGC.CGCG.CCGGATCTT.TGT.CTG..CG.CG.GTCGCTCCCCCCGCGGGGGCGTGGCTCGAAActcggcctc                                                     >  2:664684/1‑93 (MQ=9)


                                                   cccccGCGGGGGCGTGGATCGAAAC....GCTG.GCGCGCGC.CGCG.CCGGATCTT.TGT.CTG..CG.CG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAActcggcctcg                                                    <  1:1301550/101‑10 (MQ=9)


                                                     cccGCGGGGGCGTGGATCGAAAC.A..GCCT.GCGCG.GC.CGCA.TCGGCT.TC.CGC.CTG..CG.TG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCtcgtcg                                                 <  1:634202/101‑1 (MQ=255)


                                                       cgcgGGGGCGTGGATCGAAAC.T..GCGT.GCGCG.CCATGAATTCATCG.AG.CGC.CAT..CG.AGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCaatgccga                                                  <  2:3670359/101‑8 (MQ=0)


                                                       cgcgGGGGCGTGGATCGAAAC.A..GCCT.GCGCG.GC.CGCA.TCGGCT.TC.CGC.CTG..CG.TG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCGTCGtt                                               <  1:3333269/101‑1 (MQ=255)


                                                        gcgGGGGCGTGGATCGAAAC.A..GCCT.GCGCG.GC.CGCA.TCGGCT.TC.CGC.CTG..CG.TG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCGTCGTTg                                              >  1:3748730/1‑101 (MQ=255)


                                                         cgGGGGCGTGGATCGAAAC.A..GCCT.GCGCG.GC.CGCA.TCGGCT.TC.CGC.CTG..CG.TG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCGTCGTTgg                                             <  1:2689497/101‑1 (MQ=255)


                                                         cgGGGGCGTGGATCGAAAC.A..GCCT.GCGCG.GC.CGCA.TCGGCT.TC.CGC.CTG..CG.TG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCGTCGTTgg                                             <  1:1394581/101‑1 (MQ=255)


                                                          gggggCGTGGATCGAAAC.A..GCCT.GCGCG.GC.CGCA.TCGGCT.TC.CGC.CTG..CG.TG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCGTCGTTGGt                                            >  1:4378169/1‑101 (MQ=255)


                                                           ggggGGTGGATCCAAAC.A..GCCT.GCGCG.GC.CGCA.TCGGTT.TC.CGC.CTG..CG.TG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCGTCGTTGGTc                                           <  1:4875229/101‑1 (MQ=255)


                                                           ggggCGTGGATCGAAAC.A..GCCT.GCGCG.GC.CGCA.TCGGCT.TC.CGC.CTG..CG.TG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGTCAGCTCGTCGTTGGTc                                           >  2:4542878/1‑101 (MQ=255)


                                                           ggggCGTGGATCGAAAC.A..GCCT.GCGCG.GC.CGCA.TCGGCT.TC.CGC.CTG..CG.TG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAAAATCAGCTCGTCGTTGGTc                                           >  1:3835259/1‑101 (MQ=255)


                                                               gggggATCGAAAC.A..GCCT.GCGCG.GC.CGCA.TCGGCT.TC.CGC.CTG..CG.TG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCGTCGTTGGTCAGcc                                       <  2:1504348/98‑1 (MQ=255)


                                                               ggTGGATAGAAAC.A..GCCT.GCGCG.GC.CGCA.TCGGCT.TC.CGC.CTG..CG.TG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCGTCGTTGGTCAGcc                                       <  2:747199/100‑1 (MQ=255)


                                                               cGTGGATCGAAAC.A..GCCT.GCGCG.GC.CGCA.TCGGCT.TC.CGC.CTG..CG.TG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCGTCGTTGGTCAGcc                                       <  1:3496113/101‑1 (MQ=255)


                                                                ggggATCGAAAC.A..GCCT.GCGCG.GC.CGCA.TCGGCT.TC.CGC.CTG..CG.TG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCGTCGTTGGTCAGCCg                                      <  1:2199597/99‑1 (MQ=255)


                                                                 tGGATCGAAAC.A..GCCT.GCGCG.GC.CGCA.TCGGCT.TC.CGC.CTG..CG.TG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCGTCGTTGGTCAGCCgg                                     <  2:3311936/101‑1 (MQ=255)


                                                                  ggATCGAAAC.A..GCCT.GCGCG.GC.CGCA.TCGGCT.TC.CGC.CTG..CG.TG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCGTCGTTGGTCAGCCGGa                                    >  1:3777720/1‑101 (MQ=255)


                                                                  ggATCGAAAC.A..GCCT.GCGCG.GC.CGCA.TCGGCT.TC.CGC.CTG..CG.TG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCGTCGTTGGTCAGCCGGa                                    >  1:4006472/1‑101 (MQ=255)


                                                                  ggATCGAAAC.A..GCCT.GCGCG.GC.CGCA.TCGGCT.TC.CGC.CTG..CG.TG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCGTCGTTGGTCAGCCGGa                                    <  2:3755266/101‑1 (MQ=255)


                                                                    aTCGAAAC.A..GCCT.GCGCG.GC.CGCA.TCGGCT.TC.CGC.CTG..CG.TG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCGTCGTTGGTCAGCCGGACg                                  >  2:2654078/1‑101 (MQ=255)


                                                                       gAAAC.A..GCCT.GCGCG.GC.CGCA.TCGGCT.TC.CGC.CTG..CG.TG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCGTCGTTGGTCAGCCGGACGATg                               <  1:771636/101‑1 (MQ=255)


                                                                       gAAAC.A..GCCT.GCGCG.GC.CGCA.TCGGCT.TC.CGC.CTG..CG.TG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCGTCGTTGGTCAGCCGGACGATg                               >  2:4320729/1‑101 (MQ=255)


                                                                         aaC.A..GCCT.GGGCG.GC.CTCA.TCGGCT.TC.CGC.CTG..CG.TG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCGTCGTTGGTCAGCCGGACGATGTc                             <  1:1468078/101‑1 (MQ=255)


                                                                         aaC.A..GCCT.GCGCG.GC.CGCA.TCGGCT.TC.CGC.CTG..CG.TG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCGTCGTTGGTCAGCCGGACGATGTc                             <  1:1694266/101‑1 (MQ=255)


                                                                          aC.A..GCCT.GCGCG.GC.CGCA.TCGGCT.TC.CGC.CTG..CG.TG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCGTCGTTGGTCAGCCGGACGATGTcc                            >  2:1913806/1‑101 (MQ=255)


                                                                           c.A..GCCT.GCGCG.GC.CGCA.TCGGCT.TC.CGC.CTG..CG.TG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCGTCGTTGGTCAGCCGGACGATGTCCg                           <  1:2595785/101‑1 (MQ=255)


                                                                                 ccT.GCGCG.GC.CGCA.TCGGCT.TC.CGC.CTG..CG.TG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCGTCGTTGGTCAGCCGGACGATGTCCGTCg                        >  1:2236265/1‑101 (MQ=255)


                                                                                  cT.GCGCG.GC.CGCA.TCGGCT.TC.CGC.CTG..CG.TG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCGTCGTTGGTCAGCCGGACGATGTCCGTCGc                       >  1:4091246/1‑101 (MQ=255)


                                                                                    cgcgcG.GC.CGCA.TCGGCT.TC.CGC.CTG..CG.TG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCGGCGTTGGTCAGCCGGACGATGTCCGTCGCt                      <  1:2355598/100‑1 (MQ=255)


                                                                                         g.gC.CGCA.TCGGCT.TC.CGC.CTG..CG.TG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCGTCGTTGGTCAGCCGGACGATGTCCGTCGCTccccc                 >  2:121791/1‑101 (MQ=255)


                                                                                           gC.CGCA.TCGGCT.TC.CGC.CTG..CG.TG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCGTCGTTGGTCAGCCGGACGATGTCCGTCGCTcccccc                <  1:2427407/101‑1 (MQ=255)


                                                                                              cGCA.TCGGCT.TC.CGC.CTG..CG.TG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCGTCGTTGGTCAGCCGGACGATGTCCGTCGCTCCCCCcgc              <  1:4440504/101‑1 (MQ=255)


                                                                                               gCA.TCGGCT.TC.CGC.CTG..CG.TG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCGTCGTTGGTCAGCCGGACGATGTCCGTCGCTCCCCCcgcg             >  2:1396510/1‑101 (MQ=255)


                                                                                               gCA.TCGGCT.TC.CGC.CTG..CG.TG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCGTCGTTGGTCAGCCGGACGATGTCCGTCGCTCCCCCcgcg             >  2:4655587/1‑101 (MQ=255)


                                                                                                cA.TCGGCT.TC.CGC.CTG..CG.TG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCGTCGTTGGTCAGCCGGACGATGTCCGTCGCTCCCCCCGCgg            >  1:2300340/1‑101 (MQ=255)


                                                                                                 a.TCGGCT.TC.CGC.CTG..CG.TG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCGTCGTTGGTCAGCCGGACGATGTCCGTCGCTCCCCCCGCggg           >  2:56684/1‑101 (MQ=255)


                                                                                                          tC.CGC.CTG..CG.TG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCGTCGTTGGTCAGCCGGACGATGTCCGTCGCTCCCCCCGCGGGGGCGTgg    <  2:1969976/101‑1 (MQ=255)


                                                                                                           c.cGC.CTG..CG.TG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCGTCGTTGGTCAGCCGGACGATGTCCGTCGCTCCCCCCGCGGGGGCGTGGa   <  1:4543198/101‑1 (MQ=255)


GATCGAAACCGGTCCAGAGATAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.A..GCCT.GCGCG.GC.CGCA.TCGGCT.TC.CGC.CTG..CG.TG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCGTCGTTGGTCAGCCGGACGATGTCCGTCGCTCCCCCCGCGGGGGCGTGGAT  >  NC_014034/1396859‑1397059

Base quality scores:


ATCG

< 3 ≤


ATCG

< 15 ≤


ATCG

< 23 ≤


ATCG

< 33 ≤


ATCG

< 40 ≤


ATCG