BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_014034	1,397,497	C→T	11.7%	T460I (ACC→ATC)	RCAP_rcc01307 →	hypothetical protein

Read alignment evidence...
	seq id	position		change	freq	score	reads	annotation	genes	product
*	NC_014034	1,397,497	0	C→T	11.7%	74.9 ‑0.8 ‑0.2	247	T460I (ACC→ATC)	RCAP_rcc01307	hypothetical protein
Reads supporting (aligned to +/- strand): new base (14/15): ref base (124/94): total (138/109)
Fisher's exact test strand distribution p-value = 4.29e-01
Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 6.81e-01

Only 100 of 286 total aligned reads displayed.


AACTCTTCAATGGATATGGCAAAACCGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGC...CCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGGCCCGCCTCAGCGCCGCGCTGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAA  >  NC_014034/1397397‑1397597


aaCTCTTCAATGGATATGGCAAAACCGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGC...CCTGcaccac                                                                                                      <  1:95821/101‑1 (MQ=255)


 aCTCTTCAATGGATATGGCAAAACCGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGC...CCTGCaccacc                                                                                                     <  1:3323588/101‑1 (MQ=255)


 aCTCTTCAATGGATATGGCAAAACCGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGC...CCTGCaccacc                                                                                                     >  2:4049786/1‑101 (MQ=255)


  ctctTCAATGGATATGGCAAAACCGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.CCATC.ACCACGCAA.CCGC...CCTGCACCACCg                                                                                                    >  1:3128230/1‑101 (MQ=255)


     ttCAATGGATATGGCAAAACCGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGC...CCTGCACCACCGGTc                                                                                                 <  2:1676847/101‑1 (MQ=255)


      tCAATGGATATGGCAAAACCGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGC...CCTGCACCACCGGTCg                                                                                                >  1:786834/1‑101 (MQ=255)


       cAATGGATATGGCAAAACCGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGC...CCTGCACCACCGGTCGc                                                                                               >  2:4424035/1‑101 (MQ=255)


       cAATGGATATGGCAAAACCGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGC...CCTGCACCACCGGTCGc                                                                                               >  2:2505669/1‑101 (MQ=255)


        aaTGGATATGGCAAAACCGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGC...CCTGCACCACCGGTCGCt                                                                                              >  1:4729112/1‑101 (MQ=255)


          tGGATATGGCAAAACCGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGC...CCTGCACCACCGGTCGCTcc                                                                                            <  1:2370702/101‑1 (MQ=255)


          tGGATATGGCAAAACCGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGC...CCTGCACCACCGGTCGCGcc                                                                                            >  2:2630457/1‑101 (MQ=255)


           ggATATGGCAAAACCGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAATACCG.TCATC.ACCCCCCAA.CCGC...CCTGCACCACCGGTCGCTccc                                                                                           >  1:3763221/1‑101 (MQ=255)


           ggATATGGCAAAACCGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGC...CCTGCACCACCGGTCGCTccc                                                                                           >  2:54314/1‑101 (MQ=255)


             atatGGCAAAACCGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGC...CCTGCACCACCGGTCGCTccccc                                                                                         <  2:4003010/101‑1 (MQ=255)


              tatGGCAAAACCGTCCGCGACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGC...CCTGCACCACCGGTCGCTcccccc                                                                                        <  2:2069469/101‑1 (MQ=255)


              tatGGCAAAACCGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGC...CCTGCACCACCGGTCGCTcccccc                                                                                        <  1:2849634/101‑1 (MQ=255)


               atGGCAAAACCGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGC...CCTGCACCACCGGTCGCTccccccc                                                                                       >  1:2970145/1‑100 (MQ=255)


               atGGCAAAACCGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGC...CCTGCACCACCGGTCGCTCCCCCcg                                                                                       >  1:2543661/1‑101 (MQ=255)


               atGGCAAAACCGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGC...CCTGCACCACCGGTCGCTCCCCCcg                                                                                       >  1:59972/1‑101 (MQ=255)


               atGGCAAAACCGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGC...CCTGCACCACCGGTCGCTCCCCCcg                                                                                       >  2:224446/1‑101 (MQ=255)


                   cAAAACCGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGC...CCTGCACCACCGGTCGCTCCCCCCGCggg                                                                                   >  2:2403806/1‑101 (MQ=255)


                     aaaCCGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGC...CCTGCACCACCGGTCGCTCCCCCCGCggggg                                                                                 >  1:3084814/1‑101 (MQ=255)


                           tCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGC...CCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGa                                                                           <  1:5004972/101‑1 (MQ=255)


                           ccgataccgcgTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCGATGATCAAATCCGCAATCGGC...CGGGCTCGATC.GTCGCTCCCCCCGCGGGGGCGTg                                                                             <  2:466566/91‑1 (MQ=0)


                            ccGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGC...CCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGAt                                                                          <  1:2604658/101‑1 (MQ=255)


                             gataccgcgTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCGATGATCAAATCCGCAATCGGC...CGGGCTCGATC.GTCGCTCCCCCCGCGGGGGCGTGGa                                                                           <  1:3047285/93‑1 (MQ=0)


                              gcgACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGC...CCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCg                                                                        <  1:1448151/101‑1 (MQ=255)


                               cgACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGC...CCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGa                                                                       >  2:2928784/1‑101 (MQ=255)


                               cgACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGC...CCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGa                                                                       <  2:377377/101‑1 (MQ=255)


                                gACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGC...CCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGaa                                                                      >  1:1581913/1‑101 (MQ=255)


                                gACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGC...CCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGaa                                                                      >  2:1087366/1‑101 (MQ=255)


                                 aCATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGC...CCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGaaa                                                                     >  2:1133190/1‑101 (MQ=255)


                                 aCATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGC...CCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGaaa                                                                     >  1:4853769/1‑101 (MQ=255)


                                  ggcgTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.CCG.CCA.C.GTCTTGGAA.CCGCGTGCCATTGGCCCCGGTCGCTCCCCCCGCGGGGGCGCGGGTCGaaa                                                                     >  1:2183431/4‑101 (MQ=2)


                                   gcgTCGCCCCCCCCGCGGGGGCGTGGATCGAAACATCGATGATCAAATCCGCAATCGGC...CGGGCTCGATC.GTCGCTCCCCCCGCGGGGGCGTGGATCGaaa                                                                     <  1:4380840/99‑1 (MQ=2)


                                   aTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGC...CCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAaaca                                                                   >  2:3480519/1‑101 (MQ=255)


                                   aTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGC...CCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAaaca                                                                   >  2:3150179/1‑101 (MQ=255)


                                   aTGTCCCTCCCCCCGCGGGGGCGTGGATCGAAACCCCG.TCATC.CCCACGCAA.CCGC...CCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAaaca                                                                   <  1:1272772/101‑1 (MQ=255)


                                     gTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGC...CCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAaacaac                                                                 >  1:3439209/1‑101 (MQ=255)


                                     gTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGC...CCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAaacaac                                                                 >  2:592392/1‑101 (MQ=255)


                                      tCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGC...CCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAAcc                                                                >  2:5039003/1‑101 (MQ=255)


                                       cGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGC...CCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAAccc                                                               <  2:820631/101‑1 (MQ=255)


                                       cGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGC...CCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAAccc                                                               <  2:410999/101‑1 (MQ=255)


                                        gCTCCCCCCGCGGGGGCGTGGATCGAAACATCGATGATCAAATCCGCAATCGGC...CGGGCTCGATC.GTCGCTCCCCCCGCGGGGGCGTGGTTCGAaacgggg                                                                >  1:468672/1‑97 (MQ=2)


                                        gCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGC...CCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCg                                                              <  1:4220434/101‑1 (MQ=255)


                                        gCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGC...CCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCg                                                              <  1:3985309/101‑1 (MQ=255)


                                        gCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGC...CCTGCACCACCGGTCGATCCCCCCGCGGGGGCGTGGATCGAAACAACCCg                                                              >  2:3244160/1‑101 (MQ=255)


                                         cTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGC...CCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGa                                                             >  2:4059335/1‑101 (MQ=255)


                                          tCCCCCCGCGGGGGCGTGGATCGAAACATCGATGATCAAATCCGCAATCGGC...CGGGCTCGATC.GTCGCTCCCCCCGCGGGGGCGTGGATCGAaacggtgtc                                                              >  1:1614679/1‑95 (MQ=2)


                                          tCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGC...CCTGCACCACCGGTGGCTACCCCCGCGGGGGCGTGGATCGAAACAACCCGAt                                                            >  1:4326115/1‑101 (MQ=255)


                                          tCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGC...CCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGAt                                                            >  1:3843188/1‑101 (MQ=255)


                                          tCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGC...CCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGAt                                                            >  1:3614242/1‑101 (MQ=255)


                                           ccccccGCGGGGGCGTGGATCGAAACATCGATGATCAAATCCGCAATCGGC...CGGGCTCGATC.GTCGCTCCCCCCGCGGGGGCGTGGATCGAaacggtgtcc                                                             <  2:2233285/101‑8 (MQ=2)


                                           ccccccGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGC...CCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATc                                                           <  1:1980732/101‑1 (MQ=255)


                                           ccccccGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGC...CCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATc                                                           <  1:119292/101‑1 (MQ=255)


                                            cccccGCGGGGGCGTGGATCGAAACATCGATGATCAAATCCGCAATCGGC...CGGGCTCGATC.GTCGCTCCCCCCGCGGGGGCGTGGATCGAaacggtgtcca                                                            <  2:4814664/101‑9 (MQ=2)


                                            cccccGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGC...CCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCa                                                          <  1:2929011/101‑1 (MQ=255)


                                             ccccGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGC...CCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCAt                                                         >  1:4968038/1‑101 (MQ=255)


                                              cccGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGC...CCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATg                                                        <  2:2869756/101‑1 (MQ=255)


                                                 gcgGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGC...CCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGGcc                                                     <  1:2505843/101‑1 (MQ=255)


                                                  cgGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGC...CCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGGccc                                                    <  1:3248272/101‑1 (MQ=255)


                                                   gggggCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGC...CCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGGCCCg                                                   <  2:530805/101‑1 (MQ=255)


                                                    ggggCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGC...CCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGGCCCGc                                                  >  2:4628928/1‑101 (MQ=255)


                                                     gggCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGC...CCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGGCCCGcc                                                 <  2:4325798/101‑1 (MQ=255)


                                                      ggCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGC...CCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGGCCCGCCt                                                <  1:1399604/101‑1 (MQ=255)


                                                      ggCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGC...CCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGGCCCGCCt                                                <  2:945070/101‑1 (MQ=255)


                                                        cGTGGATCGAAACCCCG.TCATC.ACCACGCAA.CCGC...CCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGGCCCGCCTCa                                              <  2:3115818/101‑1 (MQ=255)


                                                         gTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGC...CCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGGCCCGCCTCAg                                             <  2:3016047/101‑1 (MQ=255)


                                                             aTCGAAACACCG.TCATC.ACCACGCAA.CCGC...CCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGGCCCGCCTCAGcgcc                                         <  2:713310/101‑1 (MQ=255)


                                                                gAAACACCG.TCATC.ACCACGCAA.CCGC...CCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGGCCCGCCTCAGCGCcgcg                                      <  1:4576817/101‑1 (MQ=255)


                                                                 aaaCACCG.TCATC.ACCACGCAA.CCGC...CCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGGCCCGCCTCAGCGCCgcgc                                     >  2:1253233/1‑101 (MQ=255)


                                                                 aaaCACCG.TCATC.ACCACGCAA.CCGC...CCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGGCCCGCCTCAGCGCCgcgc                                     >  2:4386209/1‑101 (MQ=255)


                                                                 aaaCACCG.TCATC.ACCACGCAA.CCGC...CCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGGCCCGCCTCAGCGCCgcgc                                     >  1:1118678/1‑101 (MQ=255)


                                                                 aaaCACCG.TCATC.ACCACGCAA.CCGC...CCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGCCCCGCCTCAGCGCCgcgc                                     >  2:3371010/1‑101 (MQ=255)


                                                                  aaCACCG.TCATC.ACCACGCAA.CCGC...CCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGGCCCGCCTCAGCGCCGCGCt                                    >  2:1834975/1‑101 (MQ=255)


                                                                   acacCG.TCATC.ACCACGCAA.CCGC...CCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGGCCCGCCTCAGCGCCGCGCta                                   >  1:1481194/1‑100 (MQ=255)


                                                                   acacCG.TCATC.ACCACGCAA.CCGC...CCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGGCCCGCCTCAGCGCCGCGCTg                                   <  2:1581781/101‑1 (MQ=255)


                                                                     acCG.TCATC.ACCACGCAA.CCGC...CCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGGCCCGCCTCAGCGCCGCGCTGAc                                 <  2:1397660/101‑1 (MQ=255)


                                                                        g.TCATC.ACCACGCAA.CCGC...CCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGGCCCGCCTCAGCGCCGCGCTGACGTc                              <  2:1067109/101‑1 (MQ=255)


                                                                            atc.aCCACGCAA.CCGC...CCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGGCCCGCCTCAGCGCCGCGCTGACGTCGCt                           <  2:394977/101‑1 (MQ=255)


                                                                            atc.aCCACGCAA.CCGC...CCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGGCCCGCCTCAGCGCCGCGCTGACGTCCCt                           >  1:1037019/1‑101 (MQ=255)


                                                                            atc.aCCACGCAA.CCGC...CCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGGCCCGCCTCAGCGCCGCGCTGACGTCACt                           >  2:4257180/1‑101 (MQ=255)


                                                                             tc.aCCACGCAA.CCGC...CCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGGCCCGCCTCAGCGCCGCGCTGACGTCGCTc                          >  1:3570757/1‑101 (MQ=255)


                                                                                accacGCAA.CCGC...CCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGGCCCGCCTCAGCGCCGCGCTGACGTCGCTccc                        >  1:1000175/1‑101 (MQ=255)


                                                                                accacGCAA.CCGC...CCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGGCCCGCCTCAGCGCCGCGCTGACGTCGCTccc                        >  2:3220898/1‑101 (MQ=255)


                                                                                 ccacGCAC.CCGC...CCTGCCCCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGGCCCGCCTCAGCGCCGCGCTCACGTCGCTcccc                       <  1:2733781/101‑1 (MQ=255)


                                                                                   acGCAA.CCGC...CCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGGCCCGCCTCAGCGCCGCGCTGACGTCGCTcccccc                     <  1:2079551/101‑1 (MQ=255)


                                                                                     gCAC.CCGC...CCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGGCCCGCCTCAGCGCCGCGCTGACGTCGCTCCCCCcgc                   <  2:786732/101‑1 (MQ=255)


                                                                                     gCAA.CCGC...CCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGGCCCGCCTCAGCGCCGCGCTGACGTCGCTCCCCCcgc                   >  1:1849373/1‑101 (MQ=255)


                                                                                     gCAA.CCAC...CCTGGACCTCCGGTCGCCCCCCCCGCGGAGGCGTGAGACGAAACACCCCGACCATGGCCCGCCTCAGCGCCGCGCTGACGTCGCTCCCCCcgc                   <  2:2139174/101‑1 (MQ=255)


                                                                                       aa.CCGC...CCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGGCCCGCCTCAGCGCCGCGCTGACGTCGCTCCCCCCGCgg                 <  2:3609791/101‑1 (MQ=255)


                                                                                        a.CCGC...CCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGGCCCGCCTCAGCGCCGCGCTGACGTCGCTCCCCCCGCggg                >  1:1521298/1‑101 (MQ=255)


                                                                                            gC...CTTGCACCCCCTGTCGCTCCCCCCGCGGGGGAGTGGATCGAAACAACCCGATCATGGCCCGCCTCAGCGCCGCGCTGACGTCGCTCCCCCCGCGGGGGc             <  1:4346265/101‑1 (MQ=38)


                                                                                            gC...CCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGGCCCGCCTCAGCGCCGCGCTGACGTCGCTCCCCCCGCGGGGGc             >  2:625108/1‑101 (MQ=255)


                                                                                                 ccTGCCCCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGGCCCGCCTCAGCGCCGCGCTGACGTCGCTCCCCCCGCGGGGGCGt           <  2:3310703/101‑1 (MQ=255)


                                                                                                  cTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGGCCCGCCTCAGCGCCGCGCTGACGTCGCTCCCCCCGCGGGGGCGTg          >  1:517973/1‑101 (MQ=255)


                                                                                                    gCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGGCCCGCCTCAGCGCCGCGCTGACGTCGCTCCCCCCGCGGGGGCGTGGa        >  2:2564711/1‑101 (MQ=255)


                                                                                                    gCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGGCCCGCCTCAGCGCCGCGCTGACGTCGCTCCCCCCGCGGGGGCGTGGa        >  2:3914572/1‑101 (MQ=255)


                                                                                                      accaccGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGGCCCGCCTCAGCGCCGCGCTGACGTCGCTCCCCCCGCGGGGGCGGGGATc      >  1:4815320/1‑101 (MQ=255)


                                                                                                       ccaccGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGGCCCGCCTCAGCGCCGCGCTGACGTCGCTCCCCCCGCGGGGGCGTGGATCg     <  1:4023952/101‑1 (MQ=255)


AACTCTTCAATGGATATGGCAAAACCGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGC...CCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGGCCCGCCTCAGCGCCGCGCTGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAA  >  NC_014034/1397397‑1397597

Base quality scores:


ATCG

< 3 ≤


ATCG

< 18 ≤


ATCG

< 25 ≤


ATCG

< 33 ≤


ATCG

< 39 ≤


ATCG