| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 1,612,411 | T→A | 2.8% | intergenic (+89/‑272) | purN → / → rnd2 | phosphoribosylglycinamide formyltransferase/ribonuclease D |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 1,612,411 | 0 | T→A | 2.8% | 3.1 ‑0.6 ‑0.1 | 141 | intergenic (+89/‑272) | purN/rnd2 | phosphoribosylglycinamide formyltransferase/ribonuclease D |
| Reads supporting (aligned to +/- strand): new base (4/0): ref base (99/38): total (103/38) | ||||||||||
| Fisher's exact test strand distribution p-value = 5.74e-01 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 7.56e-01 | ||||||||||
Only 100 of 210 total aligned reads displayed.
CTGGATCTGTGACGGCGATCCGCTGATCTGACCGAGGCCATCGCCGAGGTCACGCGACACATTGGCCCCGTGACCGCCGAGGG.CCCAGAGGCCCTCGGCCTGCGCCCGCCCCGC.CCA.TGGCGGGCG.CAT.TCGCGCCGCCGGGGCGGGACGCAGGCCTCCCGCGCGCTTGGGGAGGCGATCTTGTCACCGGCTTGGTCGCGA > NC_014034/1612311‑1612511
|
cTGGATCTGTGACGGCGATCCGCTGATCTGACCGAGGCCATCGCCGAGGTCACGCGACACATTGGCCCCGTGACCGCCGAGGG.CCCAGAGGCCCTCGGCCt < 1:1654594/101‑1 (MQ=255)
tGGATCTGTGACGGCGATCCGCTGATCTGACCGAGGCCATCGCCGAGGTCACGCGACACATTGGCCCCGTGACCGCCGAGGG.CCCAGAGGCCCTCGGCCTg < 2:4440549/101‑1 (MQ=255)
tGGATCTGTGACGGCGATCCGCTGATCTGACCGAGGCCATCGCCGAGGTCACGCGACACATTGGCCCCGTGACCGCCGAGGG.CCCAGAGGCCCTCGGCCTg < 2:2131519/101‑1 (MQ=255)
ggATCTGTGACGGCGATCCGCTGATCTGACCGAGGCCATCGCCGAGGTCACGCGACACATTGGCCCCGTGACCGCCGAGGG.CCCAGAGGCCCTCGGCCTgc > 2:2817996/1‑101 (MQ=255)
aTCTGTGACGGCGATCCGCTGATCTGACCGAGGCCATCGCCGAGGTCACGCGACACATTGGCCCCGTGACCGCCGAGGG.CCCAGAGGCCCTCGGCCTtcgc > 2:709860/1‑101 (MQ=255)
tCTGTGACGGCGATCCGCTGATCTGACCGAGGCCATCGCCGAGGTCACGCGACACATTGGCCCCGTGACCGCCGAGGG.CCCAGAGGCCCTCGGCCTGcgcc < 2:405483/101‑1 (MQ=255)
cTGTGACGGCGATCCGCTGATCTGACCGAGGCCATCGCCGAGGTCACGCGACACATTGGCCCCGTGATCGCCGAGGG.CCCAGAGGCCCTCGGCCTGcgccc > 1:4662350/1‑101 (MQ=255)
tgtgACGGCGATCCGCTGATCTGACCGAGGCCATCGCCGAGGTCACGCGACACATTGGCCCCGTGACCGCCGAGGG.CCCAGAGGCCCTCGGCCTGcgcccg > 2:4081410/1‑101 (MQ=255)
gACGGCGATCCGCTGATCTGACCGAGGCCATCGCCGAGGTCACGCGACACATTGGCCCCGTGACCGCCGAGGG.CCCAGAGGCCCTCGGCCTGCgcccgccc > 2:3998725/1‑101 (MQ=255)
gACGGCGATCCGCTGATCTGACCGAGGCCATCGCCGAGGGCACGCGACACATTGGCCCCGTGACCGCCGAGGG.CCCAGCGGGCCCCCGCCTGCggccgccc > 2:3906036/1‑101 (MQ=21)
aCGGCGATCCGCTGATCTGACCGAGGCCATCGCCGAGGTCACGCGACACATTGGCCCCGTGACCGCCGAGGG.CCCAGAGGCCCTCGGCCTGCGcccgcccc > 2:4885607/1‑101 (MQ=255)
ggCGATCCGCTGATCTGACCGAGGCCATCGCCGAGGTCACGCGACACATTGGCCCCGTGACCGCCGAGGG.CCCAGAGGCCCTCGGCCTGCGcccgccccgc > 1:4251185/1‑101 (MQ=255)
gggacccGCTGATCTGCCCGAGCCCATCGCCGAGGTCACGCGACACATTGGCCCCGTGCCCGCCGAGGG.CCCAGAGGCCCTCGGCCTGCGCccgccccgc.c < 2:1796700/96‑1 (MQ=18)
gCGATCCGCTGATCGGGCCGGGGCCAGCGCTGTGGTCCCGGGCCACATTGGCCCCGTGACCCCCGGGGG.CCCGGAGGCCCTCGATCGGCGCccgccccgc.c < 2:3967226/101‑1 (MQ=12)
cGATCCGCTGATCTGACCGAGGCCATCGCCGAGGTCACGCGACACATTGTCCCCGTGACCGCCGAGGG.CCCAGAGGCCCTCGGCCTGCGCCcgccccgc.cc > 1:4947883/1‑101 (MQ=255)
cGATCCGCTGATCTGACCGAGGCCATCGCCGAGGTCACGCGACACATTGGCCCCGTGACCGCCGAGGG.CCCAGAGGCCCTCGGCCTGCGCCcgccccgc.cc > 1:1888595/1‑101 (MQ=255)
gATCCGCTGATCTGACCGAGGCCATCGCCGAGGTCACGCGACACATTGGCCCCGTGACCGCCGAGGG.CCCAGAGGACCTCGGCCTGCGCCcgccccgc.ccc > 2:4606283/1‑100 (MQ=255)
ccGCTGATCTGACCGAGGCCATCGCCGAGGTCACGCGACACATTGGCCCCGTGACCGCCGAGGG.CCCAGAGGCCCTCGGCCTGCGCCCGCCCCGC.CCA.Tgg > 2:814446/1‑101 (MQ=255)
cGCTGATCTGACCGAGGCCATCGCCGAGGTCACGCGACACATTGGCCCCGTGACCGCCGAGGG.CCCAGAGGCCCTCGGCCTGCGCCCGCCCCGC.CCA.Tggc > 2:2990643/1‑101 (MQ=255)
cTGATCTGACCGAGGCCATCGCCGAGGTCACGCGACACATTGGCCCCGTGACCGCCGAGGG.CCCAGAGGCCCTCGGCCTGCGCCCGCCCCGC.CCA.Tggcgg > 1:3125619/1‑101 (MQ=255)
gATCTGACCGAGGCCATCGCCGAGGTCACGCGACACATTGGCCCCGTGACCGCCGAGGG.CCCAGAGGCCCTCGGCCTGCGCCCGCCCCGC.CCA.Tggcgggc > 1:2202603/1‑101 (MQ=255)
tCTGCCCGAGGCCATCGCGGAGGTCACGCGACACATTGGCCCCGTGACCGCCGAGGG.CCCAGAGGCCCTCGGCCTGCGCCCGCCCCGC.CCA.TGGCGGgcg.c < 2:2962125/101‑1 (MQ=255)
tCTGCCCGAGGCCATCGCCGAGGTCACGCGACACATTGCCCCCGTGACCGCCGAGGG.CCCAGAGGCCCTCGGCCTGCGCCCGCCCCGC.CCA.TGGCGGgcg.c < 1:3151154/101‑1 (MQ=255)
tCTGACCGAGGCCATCGCCGAGGTCACGCGACACATTGGCCCCGTGACCGCCGAGGG.CCCAGAGGCCCTCGGCCTGCGCCCGCCCCGC.CCA.TGGCGGgcg.c < 2:4870244/101‑1 (MQ=255)
cTGACCGAGGCCATCGCCGAGGTCACGCGACACATTGGCCCCGTGACCGCCGAGGG.CCCAGAGGCCCTCGGCCTGCGCCCGCCCCGC.CCA.TGGCGGGCG.Ca > 2:3361631/1‑101 (MQ=255)
gcccaGGCCATCCCCGAGGTCACGCGACACATTGGCCCCGTGACCGCCGAGGG.CCCAGAGGCCCTCGGCCTGCGCCCGCCCCGC.CCA.TGGCGGGCG.CAT.Tc < 2:3277896/97‑1 (MQ=255)
cccGGGGCCATCGCCGAGGCCACGCGACACATTGGCCCCGTGCCCGCCGAGGG.CCCAGAGGCCCTCGGCCTGCGCCCGCCCCGC.CCA.TGGCGGGCG.CAT.Tc < 1:4800228/100‑1 (MQ=255)
aCCGAGGCCATCGCCGAGGTCACGCGACACATGGGCCCCGTGCCCGCCGAGGG.CCCAGAGGCCCTCGGCCTGCGCCCGCCCCGC.CCA.TGGCGGGCG.CAT.Tc < 1:1529013/101‑1 (MQ=255)
aCCGAGCCCATCGCCGAGGTCACGCGACACATTGCCCCCGTGCCCGCCGAGGG.CCCAGAGGCCCTCGGCCTGCGCCCGCCCCGC.CCA.TGGCGGGCG.CAT.Tc < 2:349600/101‑1 (MQ=255)
cgggggctctCGCGGAGGCCACGCGACACATGGGCCCCGTGCCGGCGGCGGG.CCCAGAGGCCCTCGTCCTGCGCCCGCCCCGC.CCA.TGGCGGGCG.CAT.Tcg < 2:4188094/92‑1 (MQ=14)
gAGGCCATCGCCGAGGTCACGCGACACATTGGCCCCGTGACCGCCGAGGG.CCCAGAGGCCCTCGGCCTGCGCCCGCCCCGC.CCA.TGGCGGggg.ccctcccg > 1:2704403/1‑94 (MQ=255)
gAGGCCATCGCCGAGGTCACGCGACACATTGGCCCCGTGACCGCCGAGGG.CCCAGAGGCCCTCGGCCTGCGCCCGCCCCGC.CCA.TGGCGGGGG.CAC.Tcgcg > 1:3047933/1‑101 (MQ=255)
ccATCGCCGAGGTCACGCGACACATTGGCCCCGTGACCGCCGAGGG.CCCAGAGGCCCTCGGCCTGCGCCCGCCCCGC.CCA.TGGCGGGGG.CAT.TCCcgcccc > 2:2456530/1‑99 (MQ=255)
ccGCCGAGGTCACGCGACACATTGGCCCCGTGACCGCCGAGGG.CCCAGAGGCCCTCGGCCTGCGCCCGCCCCGC.CCA.TGGCGGGCG.CAT.TCGCGCCGCCgg < 2:4674456/100‑1 (MQ=255)
ggggccccgcgACACATGGGCCCCGTGCCCGCCGAGGG.CCCAGAGGCCCTCGGCCTGCGCCCGCCCCGC.CCA.TGGCGGGCG.CAT.TCGCGCCGCCGGGGCgg < 1:455832/94‑1 (MQ=14)
gAGGTCCCGCGACACATTGGCCCCGTGCCCGCCGAGGG.CCCAGAGGCCCTCGGCCTGCGCCCGCCCCGC.CCA.TGGCGGGCG.CAT.TCGCGCCGCCGGGGCgg < 2:2858086/101‑1 (MQ=255)
aGGTCACGCGACACATTGGCCCCGTGACCGCCGAGGG.CCCAGAGGCCCTCGGCCTGCGCCCGCCCCGC.CCA.TGGCGGGGG.CAT.TCGCGCCCCCCGGGGggg > 1:3025809/1‑101 (MQ=18)
aGGTCACGCGACACATTGGCCCCGTGACCGCCGAGGG.CCCAGAGGCCCTCGGCCTGCGCCCGCCCCGC.CCA.TGGCGGGCG.CCG.TCGCGCCGCCCGGGGggg > 2:4570885/1‑101 (MQ=18)
aGGTCACGCGACACATTGCCCCCGTGCCCGCCGAGGG.CCCAGAGGCCCTCGGCCTGCGCCCGCCCCGC.CCA.TGGCGGGCG.CAT.TCGCGCCGCCGGGGCggg < 2:2091850/101‑1 (MQ=255)
ccACGCGACACATTGGCCCCGTGACCGCCGGGGG.CCCAGAGGCCCTCGGCCTGCGCCCGCCCCGC.CCA.TGGCGGGCG.CAT.TCGCGCCGCCGGGGCGGGACg < 1:864715/100‑1 (MQ=255)
cACGCGACACATTGGCCCCGTGACCGCCGAGGG.CCCAGAGGCCCTCGGCCTGCGCCCGCCCCGC.CCA.TGGCGGGGG.CAT.TCGCGCCGCCCGGGGggggggc > 2:779116/1‑97 (MQ=17)
cACCCGACACATTGGCCCCGGGACCGCCGAGGG.CCCAGAGGCCCTCGGCCTGCGCCCGCCCCGC.CCA.TGGCGGGCG.CAT.TCGCGCCGCCGGGGCGGGACGc < 2:4968539/101‑1 (MQ=255)
aCGCGACACATTGGCCCCGTGACCGCCGAGGG.CCCAGAAGCCCTCGGCCTGTGCCCGCCCCGC.CCA.TGGCGGGAG.CGT.TTGCGCCGCCGGGGGggggggca > 1:3014425/1‑96 (MQ=17)
gcgcgacaTTTGCCCCAAGACCGCCGAGGGCCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGCGCCACTGGCGGGGG.CCTCTCCCCCCCCCCGGGCgggggg > 1:1055820/6‑98 (MQ=18)
gcgACACATTGGCCCCGTGACCGCCGAGGG.CCCAGAGGCCCTCGGCCTGCGCCCGCCCCGC.CCA.TGGCGGGGG.CCC.TCGCGCCCCCCGGGGGGGCCGCAgg > 2:2655987/1‑101 (MQ=17)
cgccccaTGGGCCCCGGGCCCGCCGAGGG.CCCAGAGGCCCTCGGCCTGCGCCCGCCCCGC.CCA.TGGCGGGCG.CAT.TCGCGCCGCCGGGGCGGGACGCAGGc < 1:2632440/96‑1 (MQ=14)
cgACACATTGGCCCCGTGACCGCCGAGGG.CCCAGAGGCCCTCGGCCTGCGCCCGCCCCGC.CCA.TGGCGGGGG.CAT.TCGCGCCGCCCGGGCgggggcgaggc > 1:629384/1‑93 (MQ=17)
cgACACATTGGCCCCGTGACCGCCGAGGG.CCCAGAGGCCCTCGGCCTGCGCCCGCCCCGC.CCA.TGGCGGGGG.CAT.TCGCGCCCCCGGGGCGGGGCggcggg > 1:680068/1‑96 (MQ=17)
gACACATTGGCCCCGTGACCGCCGAGGG.CCCAGAGGCCCTCGGCCTGCGCCCGCCCCGC.CCA.TGGCGGGCG.CAT.TCGCGCCGCCCGGGCGGGGCGcccgcc > 2:254599/1‑96 (MQ=255)
acccaTTGCCCCCGGGCCCGCGGGGGG.CCCAGGGGCCCTCGGCCTGCGCCCGCCCCGC.CCA.TGGCGGGCG.CAT.TCGCGCCGCCGGGGCGGGACGCAGGCCt < 1:2612780/98‑1 (MQ=14)
acacATTGGCCCCGTGACCGCCGAGGG.CCCAGAGGCCCTCGGCCTGCGCCCGCCCCGC.CCA.TGGCGGGGG.GAG.TCCCGCCGCCCGGGGGGGGCCCCGGccc > 1:4926450/1‑100 (MQ=14)
cacaTTGGCCCCGTGACCGCCGAGGG.CCCAGAGGCCCTCGGCCTGCGCCCGCCCCGC.CCA.TGGCGGGCG.CCT.TTCTGCCCCCGGGGCGGGGCGcgcggctc > 2:174104/1‑94 (MQ=14)
actttGGCCCCGTGACCCCCGAGGG.CCCAGAGGCCCTGGGCCTGCGCCCGCCCCGC.CCA.TGGCGGGCG.CAT.TCGCGCCGCCGGGGCGGGACGCAGGCCTcc < 2:566120/98‑1 (MQ=255)
acaTTGGCCCCGTGACCGCCGAGGG.CCCAGAGGCCCTCGGCCTGCGCCCGCCCCGC.CCA.TGGCGGGCG.CAT.TTGCGCCGCCCGGGCGGGACGCAGGGCTcc > 2:3329820/1‑101 (MQ=255)
aTTGGCCCCGTGACCGCCGAGGG.CCCAGAGGCCCTCGGCCTGCGCCCGCCCCGC.CCA.TGGCGGGCG.CCT.TCGCCCCGCCCGGGCGGGGCGCAGGCCTcccc > 2:3839266/1‑100 (MQ=14)
aTTGCCCGCGTGCCCGCCGAGGG.CCCAGAGGCCCTCGGCCTGCGCCCGCCCCGC.CCA.TGGCGGGCG.CAT.TCGCGCCGCCGGGGCGGGACGCAGGCCTCCcg < 2:1884183/101‑1 (MQ=255)
aTTGCCCCCCAGCCCGCCGGGGG.CCGAGAGGCCCTCGCCCCGCCCCCGCCCCGC.CCA.TGGCGGGCG.CAT.TCGCGCCGCCGGGGCGGGACGCAGGCCTCCcg < 2:1847058/101‑1 (MQ=14)
ttGGCCCCGTGACCGCCGAGGG.CCCAGAGGCCCTCGGCCTGCGCCCGCCCCGC.CCA.TGGCGGGCG.CCT.TCCCGCCGCCCGGGGGGGGCGCCGGCCTccccc > 1:1499679/1‑99 (MQ=14)
atGGCCCCGTGACCGGCGAGGG.CCCAAAGGCCCTCGGCCTGCGCCCGCCCCGC.CAT.CGGCGGGGG.CCC.CCCCCCCCCCCGGGCGGGGGGCCGGCCCccctg > 2:1518812/2‑99 (MQ=9)
ccccGAGCCCGCCGGGGG.CCCGGGGGCCCGGGCCCGGGCCCCGCCCCGC.CCA.TGGCGGGCG.CAT.TCGCGCCGCCGGGGCGGGACGCAGGCCTCCCgcgcgc < 1:3591232/101‑1 (MQ=17)
cccGTGCCCGCCGGGGG.CCCAGAGCCCCTCGGCCTGCGCCCGCCCCGC.CCA.TGGCGGGCG.CAT.TCGCGCCGCCGGGGCGGGACGCAGGCCTCCCGCGCGCt < 2:3021511/101‑1 (MQ=255)
cccGTGACCGCCGAGGG.CCCAGAGGCCCTCGGCCTGCGCCCGCCCCGC.CCA.TGGCGGGCG.GCT.TCGCGCCGCCCGGGCGGGACGCCGGCCCCCCgcccgcc > 1:4858218/1‑100 (MQ=17)
ccGTGCCCGCCGGGGG.CCCAGGGGCCCTCGCCCTGCGCCCGCCCCGC.CCA.TGGCGGGCG.CAT.TCGCGCCGCCGGGGCGGGACGCAGGCCTCCCGCGCGCtt < 1:321874/101‑1 (MQ=18)
ccGTGACCGCCGAGGG.CCCAGAGGCCCTCGGCCTGCGCCCGCCCCGC.CCA.TGGCGGGCG.CAT.TCGCGCCGCCCGGGCGGGGCGCAGGCCTCCCgcgcgcct > 2:362130/1‑99 (MQ=255)
cggcaCCGCCGGGGG.CCCAGCGGCCCTCGGCCTGCGCCCGCCCCGC.CCA.TGGCGGGCG.CAT.TCGCGCCGCCGGGGCGGGACGCAGGCCTCCCGCGCGCTTg < 2:1005597/97‑1 (MQ=255)
cGTGACCGCGGGGGG.CCCGGAGGCCCTCGGCCTGCGCCCGCCCCGC.CCA.TGGCGGGCG.CAT.TCGCGCCGCCGGGGCGGGACGCAGGCCTCCCGCGCGCTTg < 2:1601793/101‑1 (MQ=255)
ctGACCGCCGGGGGCCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGC.CCC.TGGCGGGCG.CTT.TCCCGCCGCCGGGGCTGGGCGCTGGCCTCCCCCCCCCTTg > 1:4608394/2‑101 (MQ=14)
atGACCGCCGAGGGCCCCAAAGGCCCTCGGCCTGCGCCCGCCCCGC.CCA.TGGCGGGCG.CAT.TCGCGCCGCCCGGGCGGGGCGCCGGCCCCCTGCCCGCCTg > 1:4736552/2‑101 (MQ=11)
tGACCGCCGAGGG.CCCAGAGGCCCTCGGCCTGCGCCCGCCCCGC.CCA.TGGCGGGCG.CAT.TCGCGCCCCCCGGGCGGGGCGCAGGGCCCCCCCGCCCCTggg > 1:278895/1‑101 (MQ=11)
gcccgccgGGGC.CCCAGGGCCCCTCGCCCGGCGCCCGCCCCGC.CCA.TGGCGGGCG.CAT.TCGCGCCGCCGGGGCGGGACGCAGGCCTCCCGCGCGCTTgggg < 2:481108/99‑1 (MQ=17)
gACCGCCGGGGC.CCCAGAGGCCCCCGGCCTGCGCCCGCCCCGC.CCA.TGGCGGGCG.CAT.TCGCGCCGCCGGGGCGGGACGCAGGCCTCCCGCGCGCTTgggg < 1:2456704/101‑1 (MQ=255)
gACCGCCGAGGG.CCCAGAGGCCCTCGGCCTGCGCCCGCCCCGC.CCA.TGGCGGGCG.GAT.TCGCGCCCCCCGGGGGGGGGGCAGGCCCCCCCCGCGCCTtggg > 1:1351025/1‑101 (MQ=14)
gccgGGGG.CCCGGAGCCCCTCGGCCTGCCCCCGCCCCGC.CCA.TGGCGGGCG.CAT.TCGCGCCGCCGGGGCGGGACGCAGGCCTCCCGCGCGCTTGGGGAGGc < 1:209676/101‑1 (MQ=18)
cccgAGGC.CCCAGCGCCCCTCGCCCTGCGCCCGCCCCGC.CCA.TGGCGGGCG.CAT.TCGCGCCGCCGGGGCGGGACGCAGGCCTCCCGCGCGCTTGGGGAGGc < 2:1177807/100‑1 (MQ=18)
cgggggg.CCCAGGGCCCCTCGGCCTGCGCCCGCCCCGC.CCA.TGGCGGGCG.CAT.TCGCGCCGCCGGGGCGGGACGCAGGCCTCCCGCGCGCTTGGGGAGGCg < 2:2396203/97‑1 (MQ=255)
ccgGGGG.CCCAGGGGCCCTCGGCCTGCGCCCGCCCCGC.CCA.TGGCGGGCG.CAT.TCGCGCCGCCGGGGCGGGACGCAGGCCTCCCGCGCGCTTGGGGAGGCg < 1:292300/101‑1 (MQ=255)
cgAGGG.CCCAGAGGCCCTCGGCCTGCGCCCGCCCCGC.CCA.TGGCGGGCG.CAT.TCCCGCCGCCCGGGGGGGGCGCCGGCCCCCCCCGCGCCTGGGGGGGCgg > 1:1005993/1‑100 (MQ=14)
ggggg.CCCGGGGCCCCCCGGCCTGCCCCCGCCCCGC.CCA.TGGCGGGCG.CAT.TCGCGCCGCCGGGGCGGGACGCAGGCCTCCCGCGCGCTTGGGGAGGCGAt < 1:178680/99‑1 (MQ=18)
gAGGG.CCCAGAGGCCCTCGGCCTGCGCCCGCCCCGC.CCA.TGGCGGGCG.CCT.TCGCCCCGCCGGGGCGGGGCGCAGGCCTCCCCCGCGCTTGGGGGgggggt > 1:3870183/1‑97 (MQ=14)
gggg.CCCAAAGGCCCTCGGCCTGCGCCCGCCCCGC.CAT.CGGCGGGGG.GCA.TCGCGCCGCCCGGGGGGGGGGCCGGGCCCCCGCGTGCCTggggggaagggc > 2:321234/2‑93 (MQ=0)
ggg.CCCAGGGGCCCTCGGCCTGCGCCCGCCCCGC.CCA.TGGCGGGCG.CAT.TCGCGCCGCCGGGGCGGGACGCAGGCCTCCCGCGCGCTTGGGGAGGCGATCt < 1:4208443/101‑1 (MQ=255)
gg.CCCAGAGGCCCTCGGCCTGCGCCCGCCCCGC.CCA.TGGCGGGCGCCAT.TC.CGCCGCCCGGGCGGGGGGCCGGACCCCCCCGCGCGCGGGGGggggggctt > 1:2111886/1‑94 (MQ=2)
gg.CCCAGAGGCCCTCGGCCTGCGCCCGCCCCGC.CCA.TGGCGGGCG.CAT.TCGCGCCGCCCGGGCGGGGCGCAGGCCTCCCGCGCGCTTGGGGGGGCGAGCtt > 2:2372077/1‑101 (MQ=17)
ggccaggagCCCCTCGGCCGGCGCCCGCCCCGC.CCA.TGGCGGGCG.CAT.TCGCGCCGCCGGGGCGGGACGCAGGCCTCCCGCGCGCTTGGGGAGGCGATCtt < 2:1449723/95‑1 (MQ=18)
ccgggggCCCTCGGCCTGCGCCCGCCCCGC.CCA.TGGCGGGCG.CAT.TCGCGCCGCCGGGGCGGGACGCAGGCCTCCCGCGCGCTTGGGGAGGCGATCTTGTc < 1:2252880/96‑1 (MQ=255)
ccAGAGGCCCTCGGCCTGCGCCCGCCCCGC.CCA.TGGCGGGCG.CAT.TCGCGCCGCCCGGGCGGGGCGCAGGGCGCCCCCGCGCCTGGGGGGGGGGGCTTGTc > 1:4293479/1‑101 (MQ=14)
agagGCCCTCGGCCTGCGCCCGCCCCGC.CCA.TGGCGGGCG.CCT.TCGCGCCGCCGGGGGGGGGCGCAGGGCTCCCCCGCGCTTGGGGGGGCGGTCTTGttcc > 1:2266934/1‑98 (MQ=14)
ggggCCCTGGGCCTGCCCCCGCCCCGC.CCA.TGGCGGGCG.CAT.TCGCGCCGCCGGGGCGGGACGCAGGCCTCCCGCGCGCTTGGGGAGGCGATCTTGTCAcc < 1:4081713/99‑1 (MQ=255)
gggccccGCGCCCTGCCCCCGCCCCGC.CCA.TGGCGGGCG.CAT.TCGCGCCGCCGGGGCGGGACGCAGGCCTCCCGCGCGCTTGGGGAGGCGATCTTGTCAcc < 1:3967963/97‑1 (MQ=21)
gagGCCCTCGGCCTGCGCCCGCCCCGC.CCA.TGGCGGGCG.CAT.TCGCGCCGCCCGGGCGGGACGCCGGCCTCCCGCGCGCCTGGGGGGGCGCTCTTGTCAcc > 2:1593462/1‑101 (MQ=18)
ggCCCTCGGCCTGCGCCCGCCCCGC.CCA.TGGCGGGCG.CAT.TCGCGCCGCCCGGGGGGGGGGCAGGCCTCCCGCGCGCTTGGGGGGGCGATCTTGTCAcccg > 1:1565014/1‑99 (MQ=18)
ccgcGGCCGGCCCCCGCCCCGC.CCA.TGGCGGGCG.CAT.TCGCGCCGCCGGGGCGGGACGCAGGCCTCCCGCGCGCTTGGGGAGGCGATCTTGTCACCGGCtt < 1:496020/98‑1 (MQ=255)
cTCGGCCTGCGCCCGCCCCGC.CCA.TGGCGGGCG.CAT.TCGCGCCGCCCGGGCGGGGCGCAGGGCTCCCGCGCGCTTGGGGGGGGGGTCTTGTCACCCGcctt > 1:538559/1‑98 (MQ=17)
cTCGGCCTGCGCCCGCCCCGC.CCA.TGGCGGGCG.CAT.TCGCGCCCCCGGGGCGGGGCGCAGGCCCCCCCCGCGCCTGGGGAGGCGGTCTTGTTACCGGGttt > 2:684016/1‑100 (MQ=14)
cGGCCTGCGCCCGCCCCGC.CCA.TGGCGGGGG.CAT.TAGCGCCCCCGGGGGGGGGGGCAGGCCTCCCGCGCACTTGGGGGGGGGATCTTGTTCCCGGCtttgg > 1:3691545/1‑98 (MQ=17)
ggCCTGCGCCCGCCCCGC.CCA.TGGCGGGCG.CAT.TCGCGCCGCCCGGGGGGGGCGCAGGCCTCCCCCGCGCTTGGGGGGGGGGGCTTGTCACCCGcgttggg > 1:3427738/1‑95 (MQ=14)
gCCTGCGCCCGCCCCGC.CCA.TGGCGGGCG.CAT.TCGCGCCGCCGGGGCGGGACGCAGGCCTCCCGCGCGCTTGGGGAGGCGATCTTGTCACCGGCTTGGtgg > 1:1449050/1‑99 (MQ=255)
ccTGCGCCCGCCCCGC.CCA.TGGCGGGCG.CAT.TCGCGCCGCCGGGGCGGGACGCAGGCCTCCCGCGCGCTTGGGGAGGCGATCTTGTCACCGGCTTTGTcgc > 2:3163399/1‑101 (MQ=255)
cTGCGCCCGCCCCGC.CCA.TGGCGGGCG.CAT.TCGCGCCCCCGGGGCGGGACGCAGGCCTCCCGCGCCCCTGGGGAGGCGATCTTTTCACCGGCTTgggccgg > 2:2008888/1‑96 (MQ=21)
tGCGCCCGCCCCGC.CCA.TGGCGGGCG.CAT.TCGCGCCGCCGGGGCGGGGCGCAGGGCCCCCGCGCGCTTGGGGAGGCGATCTTGTCACCGGCTTGGtgccgc > 1:4190972/1‑96 (MQ=21)
|
CTGGATCTGTGACGGCGATCCGCTGATCTGACCGAGGCCATCGCCGAGGTCACGCGACACATTGGCCCCGTGACCGCCGAGGG.CCCAGAGGCCCTCGGCCTGCGCCCGCCCCGC.CCA.TGGCGGGCG.CAT.TCGCGCCGCCGGGGCGGGACGCAGGCCTCCCGCGCGCTTGGGGAGGCGATCTTGTCACCGGCTTGGTCGCGA > NC_014034/1612311‑1612511
Base quality scores:
ATCG
< 3 ≤
ATCG
< 15 ≤
ATCG
< 24 ≤
ATCG
< 33 ≤
ATCG
< 41 ≤
ATCG
|