| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 1,612,427 | A→T | 2.6% | intergenic (+105/‑256) | purN → / → rnd2 | phosphoribosylglycinamide formyltransferase/ribonuclease D |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 1,612,427 | 0 | A→T | 2.6% | 4.6 ‑1.7 ‑0.0 | 191 | intergenic (+105/‑256) | purN/rnd2 | phosphoribosylglycinamide formyltransferase/ribonuclease D |
| Reads supporting (aligned to +/- strand): new base (4/1): ref base (83/102): total (88/103) | ||||||||||
| Fisher's exact test strand distribution p-value = 1.81e-01 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 9.38e-01 | ||||||||||
Only 100 of 210 total aligned reads displayed.
GATCCGCTGATCTGACCGAGGCCATCGCCGAGGTCACGCGACACATTGGCCCCGTGA.CCGCCGAGGG.CCCAGAGGCCCTCGGCCTGCGCCCGCCCCGC.CCA.TGGCGGGCG.CAT.TCGCG.CCGCCGGG.GCGGGACGCAGGCCTCCCGCGCGCTTGGGGAGGCGATCTTGTCACCGGCTTGGTCGCG.ACGGGCGGGGAAAGGCG > NC_014034/1612327‑1612527
|
gATCCGCTGATCTGACCGAGGCCATCGCCGAGGTCACGCGACACATTGGCCCCGTGA.CCGCCGAGGG.CCCAGAGGCCCTCGGCCTGCGCCCGCCCCGC.CCa > 1:4278948/1‑101 (MQ=255)
acccGCTGATCTGCCCGGGGTCGCCGCCGAGGCCACGCGACACATTGGCCCCGTAA.CCGCCGGGGG.CCCGGAGGCCCTCGGCCTGCGCCCGCCCCGC.CCA.t < 2:523298/99‑1 (MQ=17)
tCCCCTGATCTGCCCGGGGCCATCGCCGAGGTCACGCGACACATTGGCCCCGTGA.CCGCCGAGGG.CCCAGAGGCCCTCGGCCTGCGCCCGCCCCGC.CCA.Tg < 1:1955965/101‑1 (MQ=255)
ccGCTGATCTGACCGAGGCCATCGCCGAGGTCACGCGACACATTGGCCCCGTGA.CCGCCGAGGG.CCCAGAGGCCCTCGGCCTGCGCCCGCCCCGC.CCA.Tgg > 2:3192321/1‑101 (MQ=255)
ccGCTGATCTGACCGAGGCCATCGCCGAGGTCACGCGACACATTGGCCCCGTGA.CCGCCGAGGG.CCCAGAGGCCCTCGGCCTGCGCCCGCCCCGC.CCA.Tgg > 2:814446/1‑101 (MQ=255)
cTGATCTGACCGAGGCCATCGCCGAGGTCACGCGACACATTGGCCCCGTGA.CCGCCGAGGG.CCCAGAGGCCCTCGGCCTGCGCCCGCCCCGC.CCA.Tggcgg > 1:3125619/1‑101 (MQ=255)
gATCTGACCGAGGCCATCGCCGAGGTCACGCGACACATTGGCCCCGTGA.CCGCCGAGGG.CCCAGAGGCCCTCGGCCTGCGCCCGCCCCGC.CCA.Tggcgggg > 2:4330202/1‑100 (MQ=255)
gATCTGACCGAGGCCATCGCCGAGGTCACGCGACACATTGGCCCCGTGA.CCGCCGAGGG.CCCAGAGGCCCTCGGCCTGCGCCCGCCCCGC.CCA.Tggcgggc > 1:2202603/1‑101 (MQ=255)
tCTGACCGAGGCCATCGCCGAGGTCACGCGACACATTGGCCCCGTGA.CCGCCGAGGG.CCCAGAGGCCCTCGGCCTGCGCCCGCCCCGC.CCA.TGGCGGgcg.c < 2:4870244/101‑1 (MQ=255)
cccGGGGCCATCGCCGAGGCCACGCGACACATTGGCCCCGTGC.CCGCCGAGGG.CCCAGAGGCCCTCGGCCTGCGCCCGCCCCGC.CCA.TGGCGGGCG.CAT.Tc < 1:4800228/100‑1 (MQ=255)
cGAGCCCATCGCCGAGGCCCCGCGACACATTGGCCCCGTGC.CCGCCGAGGG.CCCAGAGGCCCTCGGCCTGCGCCCGCCCCGC.CCA.TGGCGGGCG.CAT.Tcgc < 1:4626683/101‑1 (MQ=14)
gAGGCCATCGCCGAGGTCACGCGACACATTGGCCCCGTGA.CCGCCGAGGG.CCCAGAGGCCCTCGGCCTGCGCCCGCCCCGC.CCA.TGGCGGGGG.CAC.Tcgcg > 1:3047933/1‑101 (MQ=255)
ggCCATCGCCGAGGTCACGCGACACATTGGCCCCGTGA.CCGCCGAGGG.CCCAGAGGCCCTCGGCCTGCGCCCGCCCCGC.CCA.TGGCGGGCG.CCT.TCGcg.cc > 2:1939749/1‑101 (MQ=255)
ccATCGCCGAGGTCACGCGACACATTGGCCCCGTGA.CCGCCGAGGG.CCCAGAGGCCCTCGGCCTGCGCCCGCCCCGC.CCA.TGGCGGGGG.CAT.TCCcg.cccc > 2:2456530/1‑99 (MQ=255)
aTCGCCGAGTTCACGCGACACATTGGCCCCGTGC.CCGCCGAGGG.CCCAGAGGCCCTCGGCCTGCGCCCGCCCCGC.CCA.TGGCGGGCG.CAT.TCGCG.ccgccg < 2:3290717/101‑1 (MQ=255)
ccGCCGAGGTCACGCGACACATTGGCCCCGTGA.CCGCCGAGGG.CCCAGAGGCCCTCGGCCTGCGCCCGCCCCGC.CCA.TGGCGGGCG.CAT.TCGCG.CCGCCgg < 2:4674456/100‑1 (MQ=255)
ccGAGGTCCCGCGACACATGGGCCCCGTGC.CGGCCGAGGG.CCCAGAGGCCCTCGGCCTGCGCCCGCCCCGC.CCA.TGGCGGGCG.CAT.TCGCG.CCGCCGGG.Gc < 1:1529775/101‑1 (MQ=17)
gAGGTCCCGCGACACATTGGCCCCGTGC.CCGCCGAGGG.CCCAGAGGCCCTCGGCCTGCGCCCGCCCCGC.CCA.TGGCGGGCG.CAT.TCGCG.CCGCCGGG.GCgg < 2:2858086/101‑1 (MQ=255)
aGGTCCCGCGACCCATTGCCCCCGTGC.CCGCCGGGGG.CCCAGAGGCCCTCGGCCTGCGCCCGCCCCGC.CCA.TGGCGGGCG.CAT.TCGCG.CCGCCGGG.GCggg < 1:1594250/101‑1 (MQ=17)
aGGTCACGCGACACATTGGCCCCGTGA.CCGCCGAGGG.CCCAGAGGCCCTCGGCCTGCGCCCGCCCCGC.CCA.TGGCGGGGG.CAT.TCGCG.CCCCCCGG.GGggg > 1:3025809/1‑101 (MQ=18)
aGGTCACGCGACACATTGGCCCCGTGA.CCGCCGAGGG.CCCAGAGGCCCTCGGCCTGCGCCCGCCCCGC.CCA.TGGCGGGCG.CCG.TCGCG.CCGCCCGG.GGggg > 2:4570885/1‑101 (MQ=18)
aGGTCACGCGACACATTGCCCCCGTGC.CCGCCGAGGG.CCCAGAGGCCCTCGGCCTGCGCCCGCCCCGC.CCA.TGGCGGGCG.CAT.TCGCG.CCGCCGGG.GCggg < 2:2091850/101‑1 (MQ=255)
ggTCACGCGACACATTGGCCCCGTGA.CCGCCGAGGG.CCCAGAGGCCCTCGGCCTGCGCCCGCCCCGC.CCA.TGGCGGGGG.CAT.TCGCG.CCGCCGGG.GGgggg > 2:1839839/1‑100 (MQ=255)
ggTCACGCGACACATTGGCCCCGTGA.CCGCCGAGGG.CCCAGAGGCCCTCGGCCTGCCCCCGCCCCGC.CCA.TGGCGGGCG.CAT.TCGCG.CCGCCGGG.GCGGGa < 1:3157204/101‑1 (MQ=255)
gcACGCGCCACATGGGCCCCGTGC.CCGCCGAGGG.CCCAGGGGCCCTCGGCCTGCGCCCGCCCCGC.CCA.TGGCGGGCG.CAT.TCGCG.CCGCCGGG.GCGGGACg < 2:1851146/100‑1 (MQ=14)
cACGCGACACATTGGCCCCGTGA.CCGCCGAGGG.CCCAGAGGCCCTCGGCCTGCGCCCGCCCCGC.CCA.TGGCGGGGG.CAT.TCGCG.CCGCCCGG.GGggggggc > 2:779116/1‑97 (MQ=17)
cACGCGACACATTGGCCCCGTGA.CCGCCGAGGG.CCCAGAGGCCCTCGGCCTGCGCCCGCCCCGC.CCA.TGGCGGGCG.CCT.TCGCC.CCCCCCGG.GCGGGGCGc > 2:1517317/1‑101 (MQ=17)
aCGCGACACATTGGCCCCGTGA.CCGCCGAGGG.CCCAGAAGCCCTCGGCCTGTGCCCGCCCCGC.CCA.TGGCGGGAG.CGT.TTGCG.CCGCCGGG.GGggggggca > 1:3014425/1‑96 (MQ=17)
cgcgACCCATGGGCCCCGGGC.CCGCCGAGGG.CCCAGAGGCCCTCGGCCTGCGCCCGCCCCGC.CCA.TGGCGGGCG.CAT.TCGCG.CCGCCGGG.GCGGGACGCAg < 2:2704218/101‑1 (MQ=17)
gcgcgacaTTTGCCCCAAGA.CCGCCGAGGGCCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGCGCCACTGGCGGGGG.CCTCTCCCC.CCCCCCGG.GCgggggg > 1:1055820/6‑98 (MQ=18)
gccgcaTTTGCCCCGTGACCCCCCGGGGG.CCCAAAGGCCCTCGGGCAGCGCCCGCCCCGC.CCA.TGGCGGGCG.CTTCTCGCC.CCCCCGGGCGCggggccgcc > 2:3524591/5‑95 (MQ=18)
gACACATTGGCCCCGTGA.CCGCCGAGGG.CCCAGAGGCCCTCGGCCTGCGCCCGCCCCGC.CCA.TGGCGGGCG.CAT.TTTCG.CCCCCCGG.GGGGGGCGCCgggc > 2:4121569/1‑99 (MQ=14)
gACACATTGGCCCCGTGA.CCGCCGAGGG.CCCAGAGGCCCTCGGCCTGCGCCCGCCCCGC.CCA.TGGCGGGCG.CAT.TCGCG.CCGCCCGG.GCGGGGCGcccgcc > 2:254599/1‑96 (MQ=255)
acccaTTGCCCCCGGGC.CCGCGGGGGG.CCCAGGGGCCCTCGGCCTGCGCCCGCCCCGC.CCA.TGGCGGGCG.CAT.TCGCG.CCGCCGGG.GCGGGACGCAGGCCt < 1:2612780/98‑1 (MQ=14)
acacATTGGCCCCGTGA.CCGCCGAGGG.CCCAGAGGCCCTCGGCCTGCGCCCGCCCCGC.CCA.TGGCGGGGG.GAG.TCCCG.CCGCCCGG.GGGGGGCCCCGGccc > 1:4926450/1‑100 (MQ=14)
cacaTTGGCCCCGTGA.CCGCCGAGGG.CCCAGAGGCCCTCGGCCTGCGCCCGCCCCGC.CCA.TGGCGGGCG.CCT.TTCTG.CCCCCGGG.GCGGGGCGcgcggctc > 2:174104/1‑94 (MQ=14)
ccaTTGGCCCGGTGC.CCGCCGAGGG.CCCAGAGCCCCTCGGCCTGCGCCCGCCCCGC.CCA.TGGCGGGCG.CAT.TCGCG.CCGCCGGG.GCGGGACGCAGGCCTcc < 2:2614278/100‑1 (MQ=255)
ccaTGGGCCCCGTGC.CCGCCGAGGG.CCCAGAGGCCCTCGGCCTGCGCCCGCCCCGC.CCA.TGGCGGGCG.CAT.TCGCG.CCGCCGGG.GCGGGACGCAGGCCTcc < 1:647670/100‑1 (MQ=255)
aTTGGCCCCGTGC.CCGCCGGGGG.CCCGGAGCCCCTCGGCCTGCGCCCGCCCCGC.CCA.TGGCGGGCG.CAT.TCGCG.CCGCCGGG.GCGGGACGCAGGCCTCCcg < 2:3922688/101‑1 (MQ=17)
aTTGGCCCCGTGA.CCGCCGAGGG.CCCAGAGGCCCTCGGCCTGCGCCCGCCCCGC.CCA.TGGCGGGGG.CGT.TCCCG.CCCCCCGG.GGGGGGGGCAGGGCCcccc > 1:4093601/1‑100 (MQ=14)
aTTGGCCCCGTGA.CCGCCGAGGG.CCCAGAGGCCCTCGGCCTGCGCCCGCCCCGC.CCA.TGGCGGGCG.CCT.TCGCC.CCGCCCGG.GCGGGGCGCAGGCCTcccc > 2:3839266/1‑100 (MQ=14)
tGGCCCCGTGA.CCGCCGAGGG.CCCAGAGGCCCTCGGCCTGCGCCCGCCCCGC.CCA.TGGCGGGGG.CAT.GCGCG.CCGCCCGG.GCGGGGCGCCGGGCCCCcgcg > 1:4371583/1‑101 (MQ=14)
ggCCCCGTGA.CCGCCGAGGG.CCCAGAGGCCCTCGGCCTGCGCCCGCCCCGC.CCA.TGGCGGGCG.CCA.TCGCG.CCGCCCGG.GCGGGGGGCAGGGCCCCcccgc > 2:3432344/1‑101 (MQ=14)
cctcGTGA.CCGCCGAGGG.CCCAAAGGCCCTCGGCCAGCGCCCGCCCCGC.CCA.TGGCGGGCG.C.T.TCTCGCCCGCCGGG.G.GGGGCGCCCGCCCCCGgcgcgcc > 2:2252815/4‑100 (MQ=14)
cccGTGA.CCGCCGAGGG.CCCAGAGGCCCTCGGCCTGCGCCCGCCCCGC.CCA.TGGCGGGCG.GCT.TCGCG.CCGCCCGG.GCGGGACGCCGGCCCCCCgcccgcc > 1:4858218/1‑100 (MQ=17)
cccGTGA.CCGCCGAGGG.CCCAGAGGCCCTCGGCCTGCGCCCGCCCCGC.CCA.TGGCGGGCG.CAT.TCGCG.CCGCCGGG.GCGGGGCCCCGGCCTCCCgcgcgcc > 1:2265531/1‑100 (MQ=255)
ccGTGC.CCGCCGGGGG.CCCAGGGGCCCTCGCCCTGCGCCCGCCCCGC.CCA.TGGCGGGCG.CAT.TCGCG.CCGCCGGG.GCGGGACGCAGGCCTCCCGCGCGCtt < 1:321874/101‑1 (MQ=18)
cGTGA.CCGCGGGGGG.CCCGGAGGCCCTCGGCCTGCGCCCGCCCCGC.CCA.TGGCGGGCG.CAT.TCGCG.CCGCCGGG.GCGGGACGCAGGCCTCCCGCGCGCTTg < 2:1601793/101‑1 (MQ=255)
cGTGA.CCGCCGGGGG.CCCAAAGGCCCTCGGCCTGCGCCCGCCCCGC.CAT.CGGCGGGGG.CGC.TCGCGCCCGCCCGG.CCGGG.GGGAGGCCCCCCtcgcgcgcg > 1:4193327/1‑98 (MQ=2)
cGTGA.CCGCCGAGGG.CCCAGAGGCCCTCGGCCTGCGCCCGCCCCGC.CCA.TGGCGGGCG.CAT.TCGCG.CCGCCCGG.GGGGGACGCCCGGCCCCCCCGCGCCTg > 2:3337243/1‑101 (MQ=14)
gTGA.CCGCCGAGGG.CCCAGAGGCCCTCGGCCTGCGCCCGCCCCGC.CCA.TGGCGGGCG.CAT.TCGCG.CCGCCGGG.GGGGGGCGCAGGCCTCCCCCGCGCCTgg > 2:3012740/1‑101 (MQ=14)
atGA.CCGCCGAGGGCCCCAAAGGCCCTCGGCCTGCGCCCGCCCCGC.CCA.TGGCGGGCG.CAT.TCGCG.CCGCCCGG.GCGGGGCGCCGGCCCCCTGCCCGCCTg > 1:4736552/2‑101 (MQ=11)
tGA.CCGCCGAGGG.CCCAGAGGCCCTCGGCCTGCGCCCGCCCCGC.CCA.TGGCGGGCG.CCC.TCGCG.CCCCCCGG.GGGGGAGGCAGGCCGCCCCCGCGCTTggg > 2:1538207/1‑101 (MQ=17)
tGA.CCGCCGAGGG.CCCAGAGGCCCTCGGCCTGCGCCCGCCCCGC.CCA.TGGCGGGCG.CAT.TCGCG.CCCCCCGG.GCGGGGCGCAGGGCCCCCCCGCCCCTggg > 1:278895/1‑101 (MQ=11)
gggcccgcggAGGG.CCCAGGGGCCCTCGGCCTGCGCCCGCCCCGC.CCA.TGGCGGGCG.CAT.TCGCG.CCGCCGGG.GCGGGACGCAGGCCTCCCGCGCGCTTgg < 2:4921059/97‑1 (MQ=255)
gA.CCGCCGGGGC.CCCAGAGGCCCCCGGCCTGCGCCCGCCCCGC.CCA.TGGCGGGCG.CAT.TCGCG.CCGCCGGG.GCGGGACGCAGGCCTCCCGCGCGCTTgggg < 1:2456704/101‑1 (MQ=255)
gA.CCGCCGAGGG.CCCAGAGGCCCTCGGCCTGCGCCCGCCCCGC.CCA.TGGCGGGCG.GAT.TCGCG.CCCCCCGG.GGGGGGGGCAGGCCCCCCCCGCGCCTtggg > 1:1351025/1‑101 (MQ=14)
cgccgAGGG.CCCAGAGGCCCTCGGCCTGCGCCCGCCCCGC.CCA.TGGCGGGCG.CCT.TCGCG.CCGCCGGG.GGGGGGCGGCGGGCTCCCCCGCGCCTGGGGGgg > 2:577055/1‑101 (MQ=14)
cgccgAGGC.CCCGGAGGCCCTCTGCCGGCGCCCGCCCCGC.CCA.TGGCGGGCG.CAT.TCGCG.CCGCCGGG.GCGGGACGCAGGCCTCCCGCGCGCTTGGGGAgg < 2:1029697/101‑1 (MQ=18)
gccgGGGG.CCCGGAGCCCCTCGGCCTGCCCCCGCCCCGC.CCA.TGGCGGGCG.CAT.TCGCG.CCGCCGGG.GCGGGACGCAGGCCTCCCGCGCGCTTGGGGAGGc < 1:209676/101‑1 (MQ=18)
cgggggg.CCCAGGGCCCCTCGGCCTGCGCCCGCCCCGC.CCA.TGGCGGGCG.CAT.TCGCG.CCGCCGGG.GCGGGACGCAGGCCTCCCGCGCGCTTGGGGAGGCg < 2:2396203/97‑1 (MQ=255)
ccgGGGG.CCCAGGGGCCCTCGGCCTGCGCCCGCCCCGC.CCA.TGGCGGGCG.CAT.TCGCG.CCGCCGGG.GCGGGACGCAGGCCTCCCGCGCGCTTGGGGAGGCg < 1:292300/101‑1 (MQ=255)
cgAGGG.CCCAGAGGCCCTCGGCCTGCGCCCGCCCCGC.CCA.TGGCGGGCG.CAT.TCCCG.CCGCCCGG.GGGGGGCGCCGGCCCCCCCCGCGCCTGGGGGGGCgg > 1:1005993/1‑100 (MQ=14)
ggggg.CCCGGGGCCCCCCGGCCTGCCCCCGCCCCGC.CCA.TGGCGGGCG.CAT.TCGCG.CCGCCGGG.GCGGGACGCAGGCCTCCCGCGCGCTTGGGGAGGCGAt < 1:178680/99‑1 (MQ=18)
gAGGG.CCCAGAGGCCCTCGGCCTGCGCCCGCCCCGC.CCA.TGGCGGGCG.CCT.TCGCC.CCGCCGGG.GCGGGGCGCAGGCCTCCCCCGCGCTTGGGGGgggggt > 1:3870183/1‑97 (MQ=14)
gggg.CCCAAAGGCCCTCGGCCTGCGCCCGCCCCGC.CAT.CGGCGGGGG.GCA.TCGCG.CCGCCCGG.GGGGGGGGCCGGGCCCCCGCGTGCCTggggggaagggc > 2:321234/2‑93 (MQ=0)
aGGG.CCCAGAGGCCCTCGGCCTGCGCCCGCCCCGC.CCA.TGGCGGGCG.CAT.TCGCG.CCGCCGGG.GCGGGGCGCCGGCCTCCCGCGCGCTTGGGGGGGCGGTc > 2:872925/1‑101 (MQ=17)
aGGG.CCCAGAGGCCCTCGGCCTGCGCCCGCCCCGC.CCA.TGGCGGGCG.CAT.TCGCG.CCGCCGGG.GCGGGGCGCAGGGCTCCCCCGCGCTTGGGGGggggggc > 2:405361/1‑96 (MQ=14)
ggg.CCCAGAGGCCCTCGGCCTGCGCCCGCCCCGC.CCA.TGGCGGGCG.CAT.TCGCG.CCGCCCGG.GGGGGGCGCAGGCCCCCCGCGCCCTTGGGGGGGCGAGCt > 2:691097/1‑101 (MQ=17)
gg.CCCAGAGGCCCTCGGCCTGCGCCCGCCCCGC.CCA.TGGCGGGCGCCAT.TC.CG.CCGCCCGG.GCGGGGGGCCGGACCCCCCCGCGCGCGGGGGggggggctt > 1:2111886/1‑94 (MQ=2)
gg.CCCAGAGGCCCTCGGCCTGCGCCCGCCCCGC.CCA.TGGCGGGCG.CAT.TCGCG.CCGCCCGG.GCGGGGCGCAGGCCTCCCGCGCGCTTGGGGGGGCGAGCtt > 2:2372077/1‑101 (MQ=17)
cccAGCGGCCCTCGGCCTGCGCCCGCCCCGC.CCA.TGGCGGGCG.CAT.TCGCG.CCGCCGGG.GCGGGACGCAGGCCTCCCGCGCGCTTGGGGAGGCGATCTTGt < 1:3634517/101‑1 (MQ=255)
ccaggagGCCCTCGGCCGGCGCCCGCCCCGC.CCA.TGGCGGGCG.CAT.TCGCG.CCGCCGGG.GCGGGACGCAGGCCTCCCGCGCGCTTGGGGAGGCGATCTTGt < 2:3115313/97‑1 (MQ=255)
ccggggccccTCGGCCGGCGCCCGCCCCGC.CCA.TGGCGGGCG.CAT.TCGCG.CCGCCGGG.GCGGGACGCAGGCCTCCCGCGCGCTTGGGGAGGCGATCTTGTc < 2:3693866/94‑1 (MQ=255)
cAGAGGCCCTCGGCCTGCGCCCGCCCCGC.CCA.TGGCGGGCG.CAT.TTGCG.CCGCCCGG.GCGGGACGCAGGGCTCCCGCGCGCTTGGGGGGGCGGTCTTGTCa > 2:2987979/1‑101 (MQ=18)
agagGCCCTCGGCCTGCGCCCGCCCCGC.CCA.TGGCGGGCG.CAT.TCGCG.CCGCCGGG.GGGGGGCGCAGGCCTCCCCCGCGCTTGGGGGGGGGGTCTTGTCAc > 1:1507799/1‑101 (MQ=17)
ggCCCTCGGCCTGCGCCCGCCCCGC.CCA.TGGCGGGCG.CAT.TCGCG.CCGCCCGG.GGGGGGGGCAGGCCTCCCGCGCGCTTGGGGGGGCGATCTTGTCAcccg > 1:1565014/1‑99 (MQ=18)
ggCCCTCGGCCTGCGCCCGCCCCGC.CCA.TGGCGGGCG.CAT.TCGCG.CCCCCCGG.GGGGGGCGCACGCCTCCCGCGCGCCTGGGGGGGGGATCTTGTCACCgg > 1:4568368/1‑101 (MQ=18)
ccgcGGCCGGCCCCCGCCCCGC.CCA.TGGCGGGCG.CAT.TCGCG.CCGCCGGG.GCGGGACGCAGGCCTCCCGCGCGCTTGGGGAGGCGATCTTGTCACCGGCtt < 1:496020/98‑1 (MQ=255)
cTCGGCCTGCGCCCGCCCCGC.CCA.TGGCGGGCG.CAT.TCGCG.CCGCCCGG.GCGGGGCGCAGGGCTCCCGCGCGCTTGGGGGGGGGGTCTTGTCACCCGcctt > 1:538559/1‑98 (MQ=17)
cGGCCTGCGCCCGCCCCGC.CCA.TGGCGGGGG.CAT.TAGCG.CCCCCGGG.GGGGGGGGCAGGCCTCCCGCGCACTTGGGGGGGGGATCTTGTTCCCGGCtttgg > 1:3691545/1‑98 (MQ=17)
cGGCCTGCCCCCGCCCCGC.CCA.TGGCGGGCG.CAT.TCGCG.CCGCCGGG.GCGGGACGCAGGCCTCCCGCGCGCTTGGGGAGGCGATCTTGTCACCGGCTTGGt < 1:2656172/101‑1 (MQ=255)
ggCCTGCGCCCGCCCCGC.CCA.TGGCGGGCG.CAT.TCGCG.CCGCCGGG.GCGGGACGCAGGCCTCCCGCGCGCTTGGGGAGGCGATCTTGTCACCGGccttggg > 1:2408339/1‑95 (MQ=255)
ggCCTGCGCCCGCCCCGC.CCA.TGGCGGGCG.CAT.TCGCG.CCGCCGGG.GCGGGACGCAGGCCTCCCGCGCGCTTGGGGAGGCGATCTTGTCACCGGCTTGGTc < 1:814548/101‑1 (MQ=255)
ggCCTGCGCCCGCCCCGC.CCA.TGGCGGGCG.CAT.TCGCG.CCGCCCGG.GGGGGGCGCAGGCCTCCCCCGCGCTTGGGGGGGGGGGCTTGTCACCCGcgttggg > 1:3427738/1‑95 (MQ=14)
gCCTGCGCCCGCCCCGC.CCA.TGGCGGGCG.CAT.TCGCG.CCGCCGGG.GCGGGACGCAGGCCTCCCGCGCGCTTGGGGAGGCGATCTTGTCACCGGCTTGGtgg > 1:1449050/1‑99 (MQ=255)
gCCGGCCCCCGCCCCGC.CCA.TGGCGGGCG.CAT.TCGCG.CCGCCGGG.GCGGGACGCAGGCCTCCCGCGCGCTTGGGGAGGCGATCTTGTCACCGGCTTGGTcg < 1:4028901/101‑1 (MQ=255)
gcgcCCGCCCCGC.CCA.TGGCGGGCG.CAT.TCGCG.CCGCCGGG.GGGGGACGCAGGCCTCCCGCGCGCTTGGGGGGGCGATCTTGTCACCGGCTTTGTCGCG.Ac > 2:2925755/1‑101 (MQ=255)
cgcccgccCCGC.CCA.TGGCGGGCG.CAT.TCGCG.CCGCCGGG.GCGGGACGCAGGCCTCCCGCGCGCTTGGGGAGGCGATCTTGTCACCGGCTTGGTCGCG.Acg < 2:1350899/101‑1 (MQ=255)
gcccgcccCGC.CCA.TGGCGGGCG.CAT.TCGCG.CCGCCGGG.GGGGGGCGCAGGCCTCCCGCGCGCTTGGGGGGGCGATCTTGTCACCCGCTTTGGcgcggccg > 1:603292/1‑97 (MQ=18)
ccgccccgc.cCA.TGGCGGGCG.CAT.TCGCG.CCGCCGGG.GCGGGACGCAGGCCTCCCGCGCGCTTGGGGAGGCGATCTTGTCACCGGCTTGGTCGCG.Acgggc < 1:2616515/101‑1 (MQ=255)
ccgccccgc.cCA.TGGCGGGCG.CAT.TCGCG.CCGCCGGG.GCGGGACGCAGGCCTCCCGCGCGCTTGGGGAGGCGATCTTGTCACCGGCTTGGTCGCG.Acgggc < 2:4949256/101‑1 (MQ=255)
ccgccccgc.cCA.TCGCGGGCG.CAT.TCGCG.CCGCCGGG.GCGGGACGCAGGCCTCCCGCGCGCTTGGGGAGGCGATCTTGTCACCGGCTTGGTCGCG.Acgggc < 1:2222376/101‑1 (MQ=255)
gccccgc.ccA.TGGCGGGCG.CAT.TCGCG.CCGCCGGG.GCGGGACGCAGGCCTCCCGCGCGCTTGGGGGGGCGGTCTTGTCACCGGCTTTGTcgcggccggggg > 2:1144034/1‑93 (MQ=21)
cccgc.ccA.TGGCGGGCG.CAT.TCGCG.CCGCCGGG.GCGGGACGCCGGCCTCCCGCGCGCTTGGGGGGGCGGTCTTTTCACCGGCCTGGGCGCGCCcgggcggg > 2:4824071/1‑101 (MQ=18)
cgc.ccA.TGGCGGGCG.CAT.TCGCG.CCGCCGGG.GCGGGACGCAGGCCTCCCGCGCGCTTGGGGAGGCGATCTTGTCACCGGCTTGGTCGCG.ACGGGCGGGGaa < 1:709949/101‑1 (MQ=255)
cgc.ccA.TGGCGGGCG.CAT.TCGCG.CCGCCGGG.GCGGGACGCAGGCCTCCCGCGCACTTGGGGAGGCGATCTTGTCACCGGCTTGGTCGCG.ACGGGCGGGGaa < 2:4371266/101‑1 (MQ=255)
gc.ccA.TGGCGGGCG.CAT.TCGCG.CCGCCGGG.GCGGGACGCAGGCCTCCCGCGCGCTTGGGGAGGCGATCTTGTCACCGGCTTGGTCGCG.ACGGGCGGGGaaa < 1:3361894/101‑1 (MQ=255)
a.TGGCGGGCG.CAT.TCGCG.CCGCCGGG.GCGGGACGCAGGCCTCCCGCGCGCTTGGGGAGGCGATCTTGTCACCGGCTTGGTCGCG.ACGGGCGGGGAAAGGCg < 1:873027/101‑1 (MQ=255)
a.TGGCGGGCG.CAT.TCGCG.CCGCCGGG.GCGGGACGCAGGCCTCCCGCGCGCTTGGGGAGGCGATCTTGTCACCGGCTTGGTCGCG.ACGGGCGGGGAAACGCg < 2:4278631/101‑1 (MQ=255)
|
GATCCGCTGATCTGACCGAGGCCATCGCCGAGGTCACGCGACACATTGGCCCCGTGA.CCGCCGAGGG.CCCAGAGGCCCTCGGCCTGCGCCCGCCCCGC.CCA.TGGCGGGCG.CAT.TCGCG.CCGCCGGG.GCGGGACGCAGGCCTCCCGCGCGCTTGGGGAGGCGATCTTGTCACCGGCTTGGTCGCG.ACGGGCGGGGAAAGGCG > NC_014034/1612327‑1612527
Base quality scores:
ATCG
< 3 ≤
ATCG
< 15 ≤
ATCG
< 25 ≤
ATCG
< 33 ≤
ATCG
< 41 ≤
ATCG
|