Predicted mutation | |||||||
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evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | NC_014034 | 1,740,769 | A→G | 3.2% | intergenic (+6/+129) | cxp → / ← RCAP_rcc01610 | thermostable carboxypeptidase 1/hypothetical protein |
Read alignment evidence... | ||||||||||
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seq id | position | change | freq | score | reads | annotation | genes | product | ||
* | NC_014034 | 1,740,769 | 0 | A→G | 3.2% | 7.1 ‑4.1 ‑0.7 | 217 | intergenic (+6/+129) | cxp/RCAP_rcc01610 | thermostable carboxypeptidase 1/hypothetical protein |
Reads supporting (aligned to +/- strand): new base (1/6): ref base (130/80): total (131/86) | ||||||||||
Fisher's exact test strand distribution p-value = 1.64e-02 | ||||||||||
Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 1.86e-01 |
Only 100 of 248 total aligned reads displayed.
GCGAGACGATCGTGACCGCCTGCGGGTTCGAGCCGACGGAAGAACCGCTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTTGA.GGGC.GA.GG.GGCGCTGCCCCCCG.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAGCAAGATGAAAGGCATCCGGTTTCATCTTGCTTCAAATACCTC > NC_014034/1740669‑1740862
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aCGATCGTGACCGCCTGCGGGTTCGAGCCGACGGAAGAACCGCTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTTGA.GGGC.GA.gg.ggg > 1:1148456/1‑100 (MQ=255)
aCGATCGTGACCGCCTGCGGGTTCGAGCCGACGGAAGAACCGCTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTTGA.GGGC.GA.gg.ggg > 1:2692585/1‑100 (MQ=255)
cGATCGTGACCGCCTGCGGGTTCGAGCCGACGGAAGAACCGCTTCTGGACTATCTCGAAAGCAAATACGTCGCGATCTACCGGCTTTGA.GGGC.GA.tg.gtgc > 1:4511443/1‑98 (MQ=255)
aTCGTGACCGCCTGCGGGTTCGAGCCGACGGAAGAACCGCTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTTGA.GGGC.GA.gg.gggggg > 2:1104603/1‑97 (MQ=255)
tCGTGACCGCCTGCGGGTTCGAGCCGACGGAAGAACCGCTTCTGGACTATCTCGAAAGCAAAAACGCCGCGATCTACCGGCTTTGA.GGGC.GA.gg.gggcgcg > 2:4758028/1‑96 (MQ=255)
gTGACCGCCTGCGGGTTCGAGCCGACGGAAGAACCGCTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTTGA.GGGC.GAGGG.GGCGCTGc > 1:4231858/1‑101 (MQ=255)
gTGACCGCCTGCGGGTTCGAGCCGACGGAAGAACCGCTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTTGA.GGGC.GAGGG.GGCGCTGc > 2:3970790/1‑101 (MQ=255)
tGACCGCCTGCGGGTTCGAGCCGACGGAAGAACCGCTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTTGA.GGGC.GAGGG.GGCGCTGcc > 2:2280418/1‑101 (MQ=255)
tGACCGCCTGCGGGTTCGAGCCGACGGAAGAACCGCTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTTGA.GGGC.GAGGG.GGCGCTGcc > 2:33618/1‑101 (MQ=255)
gACCGCCTGCGGGTTCGAGCCGACGGAAGAACCGCTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTTGA.GGGC.GAGGG.GGCGCTGccc > 2:1816091/1‑101 (MQ=255)
gACCGCCTGCGGGTTCGAGCCGACGGAAGAACCGCTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTTGA.GGGC.GA.gg.ggggggggccc > 2:1777856/1‑92 (MQ=255)
ccGCCTGGGGGTTCGAGCCGACGGAAGAACCGCTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTTGA.GGGC.GAGGG.GGCGCTGccccc < 2:4956574/101‑1 (MQ=255)
ccGCCTGCGGGTTCGAGCCGACGGAAGAACCGCTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTTGA.GGGC.GAGGG.GGGGCTGccccc > 1:1740170/1‑101 (MQ=255)
gCCTGCGGGTTCGAGCCGACGGAAGAACCGCTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTTGA.GGGC.GAGGG.GGCGCTGcccccgc > 2:1229752/1‑99 (MQ=255)
ccTGCGGGTTCGAGCCGACGGAAGAACCGCTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTTGA.GGGC.GAGGG.GGCGCTGcccccgcc < 1:2320977/101‑4 (MQ=255)
cTGGGGGTTCGAGCCGACGGAAGAACCGCTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTTGA.GGGC.GAGGG.GGCGCTGcccccgccg < 1:3639065/101‑5 (MQ=255)
gCGGTTTCGAGCCGACGGAAGAACCGCTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTTGA.GGGC.GAGGG.GGCGCTGCCCCCGC.CGAg < 2:3771339/101‑1 (MQ=255)
gCGGGTTCGAGCCGACGGAAGAACCGCTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTTGA.GGGC.GAGGG.GGCGCTGCCCCCGC.CGAg > 1:4071554/1‑101 (MQ=255)
cGGGTTCGAGCCGACGGAAGAACCGCTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTTGA.GGGC.GAGGG.GGCGCTGCCCCCGC.CGAgg > 2:2498998/1‑101 (MQ=255)
gggTTCGAGCCGACGGAAGAACCGCTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTTGA.GGGC.GAGGG.GGCGCTGCCCCCGC.CGAGGc > 1:525923/1‑101 (MQ=255)
gTTCGAGCCGACGGAAGAACCGCTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTTGA.GGGC.GAGGG.GGCGCTGCCCCCGC.CGAGGCGa > 2:1620218/1‑101 (MQ=255)
ttCGAGCCGACGGAAGAACCGCTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTTGA.GGGC.GAGGG.GGCGCTGCCCCCGC.CGAGGCGAt < 1:4718337/101‑1 (MQ=255)
cGAGCCGACGGAAGAACCGCTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTTGA.GGGC.GAGGG.GGCGCTGCCCCCGC.CGAGGCGATGc > 2:2542427/1‑101 (MQ=255)
gAGCCGACGGAAGAACCGCTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTTGA.GGGC.GAGGG.GGCGCTGCCCCCGC.CGAGGCGATGcc < 1:1331670/101‑1 (MQ=255)
gAGCCGACGGAAGAACCGCTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTTGA.GGGC.GAGGG.GGCGCTGCCCCCGC.CGAGGCGATGcc > 1:2481117/1‑101 (MQ=255)
gCCGACGGAAGAACCGCTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTTGA.GGGC.GAGGG.GGCGCTGCCCCCGC.CGAGGCGATGCCTc < 2:5015265/101‑1 (MQ=255)
ccGACGGAAGAACCGCTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTTGA.GGGC.GAGGG.GGCGCTGCCCCCGC.CGAGGCGATGCCTCg < 1:3556408/101‑1 (MQ=255)
cGGAAGAACCGCTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTTGA.GGGC.GAGGG.GGCGCTGCCCCCGC.CGAGGCGATGCCTCGGccc > 1:3686724/1‑101 (MQ=255)
ggAAGAACCGCTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTTGA.GGGC.GAGGG.GGCGCTGCCCCCGC.CGAGGCGATGCCTCGGcccc > 1:2830597/1‑101 (MQ=255)
ggAAGAACCGCTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTTGA.GGGC.GAGGG.GGCGCTGCCCCCGC.CGAGGCGATGCCTCGGcccc < 2:3547503/101‑1 (MQ=255)
gaagaaCCGCTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTTGA.GGGC.GAGGG.GGCGCTGCCCCCGC.CGAGGCGATGCCTCGGccccc < 2:554440/101‑1 (MQ=255)
gaagaaCCGCTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTTGA.GGGC.GAGGG.GGCGCTGCCCCCGC.CGAGGCGATGCCTCGGccccc > 2:2157939/1‑101 (MQ=255)
aagaaCCGCTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTCCCGGCTTTGA.GGGC.GAGGG.GGCGCTGCCCCCGC.CGAGGCGATGCCTCGGcccccc < 1:83615/101‑1 (MQ=255)
aagaaCCGCTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTTGA.GGGC.GAGGG.GGCGCTGCCCCCGC.CGAGGCGATGCCTCGGcccccc < 2:517621/101‑1 (MQ=255)
agaaCCGCTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTTGA.GGGC.GAGGG.GGCGCTGCCCCCGC.CGAGGCGATGCCTCGGCCCCCCg > 1:206526/1‑101 (MQ=255)
agaaCCGCTCCTGTACTACCTCGAAATCAAATACGCCCCGATCTCCCGGCTTCGA.GGGC.GA.GGCGTCGCTGCCCCCGC.CGAGGCGATGCCTCGGCCCCCCg < 2:4511123/101‑1 (MQ=255)
gaaCCGCTTCTGGACTATCTCGAAAGCAAATACTCCGCGATCTCCCGGCTTTGA.GGGC.GAGGG.GGCGCTGCCCCCGC.CGAGGCGATGCCTCGGCCCCCCgg < 1:3340061/101‑1 (MQ=255)
aaCCGCTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTTGA.GGGC.GAGGG.GGCGCTGCCCCCGC.CGAGGCGATGCCTCGGCCCCCCggg > 2:1991848/1‑101 (MQ=255)
aaCCGCTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTTGA.GGGC.GAGGG.GGCGCTGCCCCCGC.CGAGGCGATGCCTCGGCCCCCCggg > 1:2953323/1‑101 (MQ=255)
ccGCTTCTGGACTATCTCGAAAGCAAATGCGCCGCGATCTACCGGCTTTGA.GGGC.GAGGG.GGCGCTGCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGat < 1:4450752/101‑1 (MQ=255)
ccGCTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTTGA.GGGC.GAGGG.GGCGCTGCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGat < 2:90843/101‑1 (MQ=255)
ccGCTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTTGA.GGGC.GAGGG.GGCGCTGCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGat < 1:4419479/101‑1 (MQ=255)
gCTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTTGA.GGGC.GAGGG.GGGGGTGCCCCCCC.CGCGGGGGTGCCTCGGCCCCCCGGGgtat > 1:3989568/1‑101 (MQ=255)
gCTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTTGA.GGGC.GAGGG.GGCGCTGCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGatat < 2:2880451/101‑1 (MQ=38)
gCTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTTGA.GGGC.GAGGG.GGCGCTGCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGatat < 2:1896841/101‑1 (MQ=38)
gCTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTTGA.GGGC.GAGGG.GGCGCTGCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGatat > 2:1711248/1‑101 (MQ=255)
cTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTTGA.GGGC.GAGGG.GGCGCTGCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATAtt < 1:1620350/101‑1 (MQ=38)
ttCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTTGA.GGGC.GAGGG.GGCGCTGCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATAttt > 2:3129937/1‑101 (MQ=38)
ttCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTTGA.GGGC.GAGGG.GGCGCTGCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATAttt > 2:3580699/1‑101 (MQ=38)
ttCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTTGA.GGGC.GAGGG.GGCGCTGCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATAttt < 2:3900114/101‑1 (MQ=38)
tCTGGACTATCTCGAAAGCAAATACGCCGCTATCTACCGGGTTGGA.GGCC.GAGGG.GGCGCTGCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTc < 1:3156696/101‑1 (MQ=25)
tCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTTGA.GGGC.GAGGG.GGCGCTGCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTc > 2:415007/1‑101 (MQ=38)
cTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTTGA.GGGC.GAGGG.GGCGCTGCCCCCGC.CGAGGCGATGCCTCGGCCCCCCCGGATATTTCg > 2:659730/1‑101 (MQ=255)
ggACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTTGA.GGGC.GAGGG.GGGGCTGCCCCCGC.CGAGGGGATGCCCCCGCCCCCCCGGGTATTTCCAg > 2:2657456/1‑101 (MQ=255)
ggACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTTGA.GGGC.GAGGG.GGCGCTGCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAg > 1:2146330/1‑101 (MQ=38)
ggACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTTGA.GGGC.GAGGG.GGCGCTGCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAg < 2:1672867/101‑1 (MQ=38)
aTCTCGAAAGCAAATACGCCGCGATCTACCGGCTTTGA.GGGC.GAGGG.GGCGCTGCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAGCAAGa > 1:3928596/1‑101 (MQ=38)
aTCTCGAAAGCAAATACGCCGCGATCTACCGGCTTTGA.GGGC.GAGGG.GGCGCTGCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAGCAAGa > 2:709305/1‑101 (MQ=38)
tcccGAAAGCAAATACGCCGCGTTCTACCGGCTTTGA.GGGC.GAGGG.GGCGGTGCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAGCAAGAt < 1:4683728/98‑1 (MQ=25)
tcGAAAGCAAATACGCCGCGATCTACCGGCTTTGA.GGGC.GAGGG.GGCGCTGCCCCCGC.CGAGGCGATGCCGCGGCCCCACGGGATATTTAGatcggaagag > 2:835218/1‑92 (MQ=255)
cGAAAGCAAATAGGCCGCGATCTACCGGCTTTGA.GGGC.GAGGG.GGCGCTGCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAGCAAGATGaa > 1:2737845/1‑101 (MQ=37)
cGAAAGCAAATACGCCGCGATCTACCGGCTTTGA.GGGC.GAGGG.GGCGCTGCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAGCAAGATGaa < 1:3856340/101‑1 (MQ=37)
agAAAACAAATACGCCGCGATCTACCGGCTTTGA.GGGC.GAGGG.GGCGCTGCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAGCAAGATGaa < 2:4023317/100‑1 (MQ=37)
gAAAGCAAATACGCCGCGATCTACCGGCTTTGA.GGGC.GAGGG.GGGGCTGCCCCCGC.CTAGGCGATGCCTCGGCCCCCCGGGGGATTTCTAGGAAGAGGaaa > 1:490612/1‑101 (MQ=255)
gAAAGCAAATACGCCGCGATCTACCGGCTTTGA.GGGC.GAGGG.GGCGCTGCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAGCAAGATGaaa > 2:1162093/1‑101 (MQ=37)
aaaGCAAATCCGCCGCGATCTACCGGCTTTGA.GGGC.GAGGG.GGCGCTGCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAGCAAGATGAAAg < 1:2423029/101‑1 (MQ=37)
aaaGCAAATACGCCGCGATCTACCGGCTTTGA.GGGC.GAGGG.GGCGCTGCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAGCAAGATGAAAg > 2:1963089/1‑101 (MQ=37)
gCAAATCCGCCGCGATCTCCGGGCTGGGA.GGGC.GAGGG.GGCGCTCCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAGCAAGATGAAAGGCa < 1:1792610/101‑1 (MQ=25)
cAAATACGCCGCGATCTACCGGCTTTGA.GGGC.GAGGG.GGCGCTGCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATAATTCGAGCAAGAAGAAAGGCac > 1:4819436/1‑100 (MQ=255)
aaaTCCCCCGCGATCTACCGGCTTGGA.GGGC.GAGGG.GGCGCTGCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAGCAAGATGAAAGGCATc < 2:1740040/101‑1 (MQ=25)
aaaTACGCCGCGATCTACCGGCTTTGA.GGGC.GAGGG.GGCGCTGCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAGCAAGATGAAAGGCATc > 2:3732941/1‑101 (MQ=37)
aaaTACGCCGCGATCTACCGGCTTTGA.GGGC.GAGGG.GGCGCTGCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAGCAAGATGAAAGGCATc > 2:3171131/1‑101 (MQ=37)
aaaTACGCCGCGATCTACCGGCTTTGA.GGGC.GAGGG.GGCGCTGCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAGCAAGATGAAAGGCATc > 2:2727847/1‑101 (MQ=37)
aaTACGCCGCGATCTACCGGCTTTGA.GGGC.GAGGG.GGCGCTGCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAGCAAGATGAAAGGCATcc > 1:975947/1‑101 (MQ=37)
atccgccgcGATCTACCGGCTTTGG.GGGC.GAGGG.GGCGCTGCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAGCAAGATGAAAGGCATCCg < 1:1771145/98‑1 (MQ=37)
ccgcGATCTACCGGCTTTGA.GGGG.GAGGG.GGCGCTGCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAGCAAGATGAAAGGCATCCGGTTTc < 1:735585/101‑1 (MQ=37)
ccgcGATCTACCGGCTTTGA.GGGC.GAGGG.GGCGCTGCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAGCAAGATGAAAGGCATCCGGTTTc > 1:1039955/1‑101 (MQ=37)
ccgcGATCTACCGGCTTTGA.GGGC.GAGGG.GGCGCTGCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAGCAAGATGAAAGGCATCCGGTTTc < 1:2281694/101‑1 (MQ=37)
ccgcGATCTACCGGCTTTGA.GGGC.GAGGG.GGCGCGGCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAGCAAGATGAAAGGCATCCGGTTTc < 2:2449692/101‑1 (MQ=37)
cgcgATCTACCGGCTTTGA.GGGC.GAGGG.GGCGCTGCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAGCAAGATGAAAGGCATCCGGTTTCa > 2:1012112/1‑101 (MQ=37)
cgcgATCTACCGGCTTTGA.GGGC.GAGGG.GGCGCTGCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAGCAAGATGAAAGGCATCCGGTTTCa < 1:401007/101‑1 (MQ=37)
cgATCTACCGGCTTTGA.GGGC.GAGGG.GGCGCTGCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAGCAAGATGAAAGGCATCCGGTTTCATc < 2:1459568/101‑1 (MQ=37)
gATCTACCGGCTTTGA.GGGC.GAGGG.GGCGCTGCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAGCAAGATGAAAGGCATCCGGTTTCATCt > 1:5020973/1‑101 (MQ=37)
aTCTCCCGGTTTGGG.GGGCGGG.GG.GGCGCTGCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAGCAAGATGAAAGGCATCCGGTTTCATCtt < 1:1229869/101‑1 (MQ=21)
aTCTACCGGCTTTGA.GGGC.GAGGG.GGCGCTGCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAGCAAGATGAAAGGCATCCGGTTTCATCtt > 1:3802319/1‑101 (MQ=25)
tccaCCGGGTTTGA.GGGG.GAGGG.GGCGCTCCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAGCAAGATGAAAGGCATCCGGTTTCATCTTg < 2:490547/98‑1 (MQ=21)
tCTCCCGGCTTTGA.GGGCGGG.GG.GGCGC.GCCCCCCGCCGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAGCAAGATGAAAGGCATCCGGTTTCATCTTg < 1:3447684/101‑1 (MQ=21)
cTACCGGCTTTGA.GGGC.GAGGG.GGCGCTGCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAGCAAGATGAAAGGCATCCGGTTTCATCTTGc > 2:4789184/1‑101 (MQ=25)
ccGGCTTTGAGGGGG.GG.GG.GGCGCTGCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAGCAAGATGAAAGGCATCCGGTTTCATCTTGCTTc < 1:2159353/101‑1 (MQ=21)
ccGGCTTTGA.GGGC.GAGGG.GGCGCTGCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAGCAAGATGAAAGGCATCCGGTTTCATCTTGCTTc > 2:2813700/1‑101 (MQ=25)
cGGTTTTGG.GGGCGGG.GG.GGCGCTGCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAGCAAGATGAAAGGCATCCGGTTTCATCTTGCTTCa < 1:2539078/101‑1 (MQ=21)
cGGCTTTGA.GGGC.GAGGG.GGCGCTGCCCCCGC.CGAGGCGAAGCCTCGGCCCCCCGGGATATTTCGAGCAAGATGAAAGGCATCCGGTTTCATCTTGCTTCa > 1:1434513/1‑101 (MQ=25)
gttttGA.GGGCGGG.GG.GGCGCTGCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAGCAAGATGAAAGGCATCCGGTTTCATCTTGCTTCaaa < 2:3648766/99‑1 (MQ=21)
cTTGGA.GGGC.GAGGG.GGCGCTGCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAGCAAGATGAAAGGCATCCGGTTTCATCTTGCTTCAAAt < 2:4743256/101‑1 (MQ=21)
tttGA.GGGC.GAGGG.GGCGCTGCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAGCAAGATGAAAGGCATCCGGTTTCATCTTGCTTCAAATa > 1:4177429/1‑101 (MQ=25)
tttGA.GGGC.GA.GG.GGGCCCGCCCCCCGCCGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAGCAAGATGAAAGGCATCCGGTTTCATCTTGCTTCAAATa < 2:4071251/101‑1 (MQ=21)
ttGA.GGGC.GAGGG.GGCGCTGCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAGCAAGATGAAAGGCATCCGGTTTCATCTTGCTTCAAATAc > 2:3236428/1‑101 (MQ=25)
tGA.GGGC.GAGGG.GGCGCTGCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAGCAAGATGAAAGGCATCCGGTTTCATCTTGCTTCAAATAcc > 1:1965100/1‑101 (MQ=25)
tgggggC.GAGGG.GGCGCTGCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAGCAAGATGAAAGGCATCCGGTTTCATCTTGCTTCAAATAcc < 1:2437475/98‑1 (MQ=21)
gA.GGGC.GAGGG.GGCGCTGCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAGCAAGATGAAAGGCATCCGGTTTCATCTTGCTTCAAATAGCt > 2:2129625/1‑101 (MQ=21)
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GCGAGACGATCGTGACCGCCTGCGGGTTCGAGCCGACGGAAGAACCGCTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTTGA.GGGC.GA.GG.GGCGCTGCCCCCCG.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAGCAAGATGAAAGGCATCCGGTTTCATCTTGCTTCAAATACCTC > NC_014034/1740669‑1740862
Base quality scores: 
ATCG
< 3 ≤
ATCG
< 15 ≤
ATCG
< 24 ≤
ATCG
< 33 ≤
ATCG
< 40 ≤
ATCG
|