| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 2,249,332 | G→T | 2.5% | intergenic (‑128/‑177) | parE ← / → RCAP_rcc02080 | DNA topoisomerase IV subunit B/HAD superfamily hydrolase |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 2,249,332 | 0 | G→T | 2.5% | 6.2 ‑1.5 ‑0.5 | 236 | intergenic (‑128/‑177) | parE/RCAP_rcc02080 | DNA topoisomerase IV subunit B/HAD superfamily hydrolase |
| Reads supporting (aligned to +/- strand): new base (5/1): ref base (123/107): total (128/108) | ||||||||||
| Fisher's exact test strand distribution p-value = 2.23e-01 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 2.88e-01 | ||||||||||
Only 100 of 270 total aligned reads displayed.
ATGCACAGATACCGCAGCTTGGGCACCCGGGGCAAGAAGGGGGCT.CTG.CCCCGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGC.TTTCATCTT.GCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CG.CCCCC..TTCGCGGGCGGCCGCGACGCGCGCCGCAACAG > NC_014034/2249233‑2249428
|
aTGCACAGATACCGCAGCTTGGGCACCCGGGGCAAGAAGGGGGCT.CTGCCCCCGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...gggg..g > 1:341858/1‑101 (MQ=255)
gCACAGATACCGCAGCTTGGGCACCCGGGGCAAGAAGGGGGCT.CTGCCCCCGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGc > 1:4565373/1‑101 (MQ=255)
cacaGATACCGCAGCTTGGGCACCCGGGGCAAGAAGGGGGCT.CTGCCCCCGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGC.t < 2:1330604/101‑1 (MQ=255)
cacaGATACCGCAGCTTGGGCACCCGGGGCAAGAAGGGGGCT.CTGCCCCCGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGC.t < 1:1417376/101‑1 (MQ=255)
aGATACCGCAGCTTGGGCACCCGGGGCAAGAAGGGGGCT.CTGCCCCCGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGC.TTTc > 2:1270258/1‑101 (MQ=255)
aGATACCGCAGCTTGGGCACCCGGGGCAAGAAGGGGGCT.CTGCCCCCGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGC.TTTc < 1:998889/101‑1 (MQ=255)
aGATACCGCAGCTTGGGCACCCGGGGCAAGAAGGGGGCT.CTGCCCCCGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGC.TTTc < 1:3110599/101‑1 (MQ=255)
gATACCGCAGCTTGGGCNCCCGGGGCAAGAAGGGGGCT.CTGCCCCCGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGC.TTTCa < 2:2347573/101‑1 (MQ=255)
gATACCGCAGCTTGGGCACCCGGGGCAAGAAGGGGGCT.CTGCCCCCGTCCCGTGCCGGGACT.TCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGC.TTTCa < 2:2222766/101‑1 (MQ=255)
gATACCGCAGCTTGGGCACCCGGGGCAAGAAGGGGGCT.CTGCCCCCGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGC.TTTCa < 2:613945/101‑1 (MQ=255)
ccGCAGCTTGGGCACCCGGGGCAAGAAGGGGGCT.CTGCCCCCGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGC.TTTCATCtt < 1:1092739/101‑1 (MQ=255)
cGCAGCTTGGGCACCCGGGGCAAGAAGGGGGCT.CTGCCCCCGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGC.TTTCATCTT.g < 2:3337026/101‑1 (MQ=255)
cGCAGCTTGGGCACCCGGGGCAAGAAGGGGGCT.CTGCCCCCGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGC.TTTCATCTT.g > 1:4236661/1‑101 (MQ=255)
gCAGCTTGGGCACCCGGGGCAAGAAGGGGGCT.CTGCCCCCGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGC.TTTCATCTT.Gc < 1:3890979/101‑1 (MQ=255)
gCAGCTTGGGCACCCGGGGCAAGAAGGGGGCT.CTGCCCCCGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGC.TTTCATCTT.Gc > 1:3509049/1‑101 (MQ=255)
gCAGCTTGGGCACCCGGGGCAAGAAGGGGGCT.CTGCCCCCGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGC.TTTCATCTT.Gc > 1:3293908/1‑101 (MQ=255)
aGCTTGGGCACCCGGGGCAAGAAGGGGGCT.CTGCCCCCGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGC.TTTCATCTT.GCCg < 2:1443510/101‑1 (MQ=255)
aGCTTGGGCACCCGGGGCAAGAAGGGGGCT.CTGCCCCCGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGC.TTTCATCTT.GCCg < 1:660105/101‑1 (MQ=255)
cTTGGGCACCCGGGGCAAGAAGGGGGCT.CTGCCCCCGTCCCGTGCCGGGACT.CCCCCGGGCTATTTGAGGCAAGATGAA...GGGG..GGC.TTTCATCTT.GCCGaa > 1:1273009/1‑101 (MQ=255)
cTTGGGCACCCGGGGCAAGAAGGGGGCT.CTGCCCCCGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGC.TTTCATCTT.GCCGaa > 1:4147154/1‑101 (MQ=255)
ttGGGCACCCGGGGCAAGAAGGGGGCT.CTGCCCCCGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGC.TTTCATCTT.GCCGaaa > 1:3827198/1‑101 (MQ=255)
ttGGGCACCCGGGGCAAGAAGGGGGCT.CTGCCCCCGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGC.TTTCATCTT.GCCGaaa > 2:1220639/1‑101 (MQ=255)
tGGGCACCCGGGGCAAGAAGGGGGCT.CTGCCCCCGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGC.TTTCATCTT.GCCGaaaa < 2:4579861/101‑1 (MQ=255)
gggCACCCGGGGCAAGAAGGGGGCT.CTGCCCCCGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGC.TTTCATCTT.GCCGAAAat < 2:322504/101‑1 (MQ=255)
aCCCGGGGCAAGAAGGGGGCT.CTGCCCCCGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGC.TTTCATCTT.GCCGAAAATATcc < 1:431164/101‑1 (MQ=255)
cccGGGGCAAGAAGGGGGCT.CTGCCCCCGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGC.TTTCATCTT.GCCGAAAATATccc > 2:3515121/1‑101 (MQ=255)
cGGGGCAAGAAGGGGGCT.CTGCCCCCGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGC.TTTCATCTT.GCCGAAAATATCCCgg > 1:1218484/1‑101 (MQ=255)
gggCAAGAAGGGGGCT.CTGCCCCCGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGC.TTTCATCTT.GCCGAAAATATCCCgggg > 2:4510651/1‑101 (MQ=255)
cAAGAAGGGGGCT.CTGCCCCCGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGC.TTTCATCTT.GCCGAAAATATCCCGGGGGGt < 2:4790983/101‑1 (MQ=255)
gagaagGGGGCTGCGC.CCCCGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGC.TTTCATCTT.GCCGAAAATATCCCGGGGTGTg < 2:1110866/100‑1 (MQ=38)
aagaagGGGGCT.CTGCCCCCGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGC.TTTCATCTT.GCCGAAAATATCCCGGGGGGTg > 2:4681391/1‑101 (MQ=255)
aagaagGGGGCT.CTGCCCCCGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGC.TTTCATCTT.GCCGAAAATATCCCGGGGGGTg > 2:365312/1‑101 (MQ=255)
aagGGGGCT.CTGCCCCCGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGC.TTTCATCTT.GCCGAAAATATCCCGGGGGGTGAA.t < 1:1933932/101‑1 (MQ=255)
ggggCT.CTGCCCCCGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGC.TTTCATCTT.GCCGAAAATATCCCGGGGGGTGAA.TGgc < 2:2188273/101‑1 (MQ=255)
gggCT.CTGCCCCCGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGC.TTTCATCTT.GCCGAAAATATCCCGGGGGGTGAA.TGgcg < 1:255547/101‑1 (MQ=255)
gggCT.CTGCCCCCGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGC.TTTCATCTT.GCCGAAAATATCCCGGGGGGTGAA.TGgcg < 2:4028024/101‑1 (MQ=255)
ggCT.CTGCCCCCGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGC.TTTCATCTT.GCCGAAAATATCCCGGGGGGTGAA.TGgcgc > 1:2439396/1‑101 (MQ=255)
ct.ctGCCCCCGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGC.TTTCATCTT.GCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..g < 1:4295982/101‑1 (MQ=255)
ct.ctGCCCCCGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGC.TTTCATCTT.GCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..g < 1:1751733/101‑1 (MQ=255)
ctgcccccGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGC.TTTCATCTT.GCCNNNNNTATCCCGGGGGTTGAA.TCGCGCA..Gcc > 1:3250151/5‑101 (MQ=25)
ctgcccccGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGC.TTTCATCTT.GCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..Gcc < 2:4878389/97‑1 (MQ=255)
ctgcccccGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGC.TTTCATCTT.GCCGAAAATATCCCGGGGGGGGAA.TGGCGCA..Gcc > 1:3458951/5‑101 (MQ=255)
gcccccGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGC.TTTCATCTT.GCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCag > 1:3177311/3‑101 (MQ=255)
gcccccGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGC.TTTCATCTT.GCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCag > 1:3994163/3‑101 (MQ=255)
gcccccGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGAAAGATGAA...GGGG..GGC.TTTCATCTT.GCCGAAAATATACCGGGGGGGGAA.GGGCGCA..GCCag > 1:2491384/3‑101 (MQ=38)
cccccGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGC.TTTCATCTT.GCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCaga < 1:2904333/100‑1 (MQ=255)
ccccGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGC.TTTCATCTT.GCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCagag > 1:817140/1‑101 (MQ=255)
cgtcccgtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGC.TTTCATCTT.GCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAgggg > 1:2776911/1‑101 (MQ=255)
cgtcccgtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGC.TTTCATCTT.GCCGAAAACATCCCGGGGGGTGAA.TGGCGCA..GCCAGAgggg > 2:579604/1‑101 (MQ=255)
gtcccgtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGC.TTTCATCTT.GCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAggggg > 1:3213276/1‑101 (MQ=255)
tcccgtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGC.TTTCATCTT.GCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAgggggg > 2:4829050/1‑101 (MQ=255)
tcccgtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGC.TTTCATCTT.GCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAgggggg < 1:392326/101‑1 (MQ=255)
atctgtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGC.TTTCATCTT.GCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAgggggg < 1:2593148/97‑1 (MQ=255)
cccgtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGC.TTTCATCTT.GCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGc > 1:2415653/1‑101 (MQ=255)
cccgtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGC.TTTCATCTT.GCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGc < 1:4980737/101‑1 (MQ=255)
cccgtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGC.TTTCATCTT.GCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGc < 1:2111314/101‑1 (MQ=255)
cccgtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGC.TTTCATCTT.GCCGAAAATATCCCGGGGGGCGAA.TGGCGCA..GCCAGAGGGGGGc > 2:2443535/1‑101 (MQ=255)
ccgtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGC.TTTCATCTT.GCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCa > 2:3711690/1‑101 (MQ=255)
ccgcaagcggACTCCCCCCGGGATATTTGCAGCAAGATGAAAC.CGGA..TGCATTTCATCTT.GCCCGAAATATCCCGGGGGGTGAA.TGGCGAA..GCCAGAgggg > 1:4872835/9‑101 (MQ=21)
cgtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGC.TTTCATCTT.GCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAg < 1:675225/101‑1 (MQ=255)
cgtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGC.TTTCATCTT.GCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAg < 2:4307761/101‑1 (MQ=255)
gtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGC.TTTCATCTT.GCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAggggggagat > 2:2592967/1‑97 (MQ=255)
gtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGC.TTTCATCTT.GCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAg.c > 1:2566735/1‑101 (MQ=255)
gtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGC.TTTCATCTT.GCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAg.c > 1:4454983/1‑101 (MQ=255)
tGCCTGGACT.CCCCCGGGATATTTGAGGCAAGATCAG...GGGG..GGT.TTTCATCTT.TCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAg.cg < 1:2240441/101‑1 (MQ=37)
gCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGC.TTTCATCTT.GCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAg.cg.c > 2:2661997/1‑101 (MQ=255)
gcggACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGAT..GCC.TTTCATCTT.GCCCGAAATATCCCGGGGGGTGAA.TGGCGAA..GCCAGAGGGGGGCAg.c < 1:2286656/99‑1 (MQ=18)
cGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGC.TTTCATCTT.GCCGAAAATATCCCGGGGGGGGAA.TGGCGCA..GCCAGAGGGGGGCAG.CG.ccc > 1:1052733/1‑101 (MQ=255)
ggACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGAT..GCC.TTTCATCTT.GCCCGAAATATCCCGGGGGGTGAA.TGGCGAA..GCCAGAGGGGGGCAg.cg.c < 2:3846146/101‑1 (MQ=17)
ggACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGC.TTTCATCTT.GCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGTCAG.CG.ccccc < 1:4368513/101‑1 (MQ=255)
gACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGC.TTTCATCTT.GCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CG.cccccc < 2:270951/101‑2 (MQ=255)
gACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGC.TTTCATCTT.GCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CG.cccccc < 1:4752675/101‑2 (MQ=255)
aCT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGC.TTTCATCTT.GCCGAAAATATCCCGGGGGGGGAA.TGGCGCA..GCCAGAGGGGGGCAG.CG.cccccct > 1:2140057/1‑99 (MQ=255)
cT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGC.TTTCATCTT.GCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CG.cccccctt < 1:4041099/101‑4 (MQ=255)
t.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGC.TTTCATCTT.GCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CG.ccccccttc < 1:2181228/101‑5 (MQ=255)
t.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGC.TTTCATCTT.GCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CG.ccccccttc < 2:1645830/101‑5 (MQ=255)
t.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGC.TTTCATCTT.GCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CG.ccccccttc > 1:4658426/1‑97 (MQ=255)
cGGGATATTTGCGGCAAGATGAA...GGGGCATGA.TTTCATCTT.GCCCGAAATATCCC.AGGGGTGAATTGGCCAAAGGCCAAGAGGGGGCAG.CG.CCCCC..tgccc > 2:3195667/1‑97 (MQ=2)
ggATATTTGAGGCAAGATGAA...GGGG..GGC.TTTCATCTT.GCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCCCCCC..TTCgcggggg > 1:3003233/1‑99 (MQ=255)
atatTTGAGGCAAGATGAA...GGGG..GGC.TTTCATCTT.GCCGAAAATATCCCGGGGGGTAAA.TGGCGCA..GACAGAGGGGGGCAG.CGCCCCCC..TTCGCGggcggc > 2:901926/1‑101 (MQ=37)
atTTGCGGCAAGATGAA...GGGGCATGA.TTTCATCTT.GCCCGAAATATCCC.AGGGGTGAATTGGCCAAAGGCCAAGAGGGGGCAG.CG.CCCCC..tgccccgccgg > 2:4122224/1‑91 (MQ=2)
ttGAGGCAAGATGAA...GGGG..GGC.TTTCATCTT.GCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCCCCCC..TTCGCGGGCGGCcgcg > 2:535086/1‑101 (MQ=255)
ttGAGGCAAGATGAA...GGGG..GGC.TTTCATCTT.GCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCCCCCC..TTCGCGGGCGGCcgcg > 2:508930/1‑101 (MQ=255)
gAGGCAAGATGAA...GGGG..GGC.TTTCATCTT.GCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCCCCCC..TTCGCGGGCGGCCGCGAc > 2:4379902/1‑101 (MQ=255)
aggtaggaggAA...GGGG..GGC.TTTCATCTT.GCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCCCCCC..TTCGCGGGCGGCCGCGAcg < 2:1582857/92‑1 (MQ=25)
ggCAAGATGAA...GGGG..GGC.TTTCATCTT.GCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCCCCCC..TTCGCGGGCGGCCGCGAcgc < 2:3458686/101‑1 (MQ=255)
gATGAA...GGGG..GGC.TTTCATCTT.GCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CG.CCCCCA.TTCGCGGGCGGCCGCGACGCGcgcc > 2:225834/1‑101 (MQ=255)
gagga...GGGG..GGC.TTTCATTTT.GGCAAAAATGCCCCGGGGGGGTAA.TGGGGGC..GCCCGGGGGGGGGCG.CC.CCCCCCTTTCGCGGGCGGCCGCGACGCGcgcc < 2:4236344/97‑1 (MQ=255)
tGAA...GGGG..GGC.TTTCATCTT.GCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCCCCCC..TTCGCGGGCGGCCGCGACGCGcgccgc > 2:1777897/1‑101 (MQ=255)
ta...GGGG..GGG.CTTCATATTCCCCGAAAATAGCGTGGGGGGTAAA.CGGCGCA..GCCAGGGGGGGGCGGCCC.CCCCC..TTCGCGGGCGGCCGCGACGCGCGCCGCa < 1:3078535/100‑1 (MQ=255)
aa...GGGG..GGC.TTTCATCTT.GCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCCCCCC..TTCGCGGGCGGCCGCGGCGCGCGCCGCaa > 2:1923001/1‑101 (MQ=255)
aa...GGGG..GGC.TTTCATCTT.GCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCCCCCC..TTCGCGGGCGGCCGCGACGCGCGCCGCaa > 2:1052694/1‑101 (MQ=255)
a...GGGG..GGC.TTTCATCTT.GCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCCCCCC..TTCGCGGGCGGCCGCGACGCGCGCCGCAAc < 1:2855191/101‑1 (MQ=255)
a...GGGG..GGC.TTTCATCTT.GCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCCCCCC..TTCGCGGGCGGCCGCGACGCGCGCCGCAAc > 2:4074801/1‑101 (MQ=255)
a...GGGG..GGC.TTTCATCTT.GCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCCCCCC..TTCGCGGGCGGCCGCGACGCGCGCCGCAAc > 2:1840746/1‑101 (MQ=255)
a...GGGG..GGC.TTTCATCTT.GCCAAAAATGTCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCCCCCC..TTCGCGGGCGGCCGCGACGCGCGCCGCAAc < 2:396183/101‑1 (MQ=37)
gggg..ggC.TTTCATCTT.GCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCCCCCC..TTCGCGGGCGGCCGCGACGCGCGCCGCAACa < 1:365365/101‑1 (MQ=255)
gggg..ggC.TTTCATCTT.GCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCCCCCC..TTCGCGGGCGGCCGCGACGCGCGCCGCAACa < 2:2897380/101‑1 (MQ=255)
gggg..ggC.TTTCATCTT.GCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCCCCCC..TTCGCGGGCGGCCGCGACGCGCGCCGCAACa < 1:4806444/101‑1 (MQ=255)
ggg..ggC.TTTCATCTT.GCCGAAAATATCCCGGGGGGGGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCCCCCC..TTCGCGGGCGGCCGCGACGCGCGCCGCAACAg > 1:2062827/1‑101 (MQ=255)
|
ATGCACAGATACCGCAGCTTGGGCACCCGGGGCAAGAAGGGGGCT.CTG.CCCCGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGC.TTTCATCTT.GCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CG.CCCCC..TTCGCGGGCGGCCGCGACGCGCGCCGCAACAG > NC_014034/2249233‑2249428
Base quality scores:
ATCG
< 3 ≤
ATCG
< 18 ≤
ATCG
< 27 ≤
ATCG
< 33 ≤
ATCG
< 40 ≤
ATCG
|